RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 VSIG10Q8N0Z9 540 aa17.67■□□□□ 0.42
HCFC2-201ENST00000229330 CFAP53Q96M91 514 aa17.67■□□□□ 0.42
HCFC2-201ENST00000229330 KANK4Q5T7N3 995 aaPredicted RBP17.67■□□□□ 0.42
HCFC2-201ENST00000229330 NEUROD2Q15784 382 aa17.66■□□□□ 0.42
HCFC2-201ENST00000229330 TPRNQ4KMQ1 711 aa17.65■□□□□ 0.42
HCFC2-201ENST00000229330 MS4A1P11836 297 aa17.65■□□□□ 0.42
HCFC2-201ENST00000229330 PTMSP20962 102 aa17.65■□□□□ 0.42
HCFC2-201ENST00000229330 SENP3Q9H4L4 574 aaPredicted RBP17.65■□□□□ 0.42
HCFC2-201ENST00000229330 GBP4Q96PP9 640 aa17.64■□□□□ 0.41
HCFC2-201ENST00000229330 DHX57Q6P158 1386 aaKnown RBP17.63■□□□□ 0.41
HCFC2-201ENST00000229330 PDE4AP27815 886 aa17.62■□□□□ 0.41
HCFC2-201ENST00000229330 ARHGAP35Q9NRY4 1499 aa17.59■□□□□ 0.41
HCFC2-201ENST00000229330 ARID3AQ99856 593 aa17.59■□□□□ 0.41
HCFC2-201ENST00000229330 ZRSR1Q15695 479 aaKnown RBP17.59■□□□□ 0.41
HCFC2-201ENST00000229330 CHMP4BQ9H444 224 aaKnown RBP17.58■□□□□ 0.4
HCFC2-201ENST00000229330 AMER1Q5JTC6 1135 aaPredicted RBP17.56■□□□□ 0.4
HCFC2-201ENST00000229330 ANO8Q9HCE9 1232 aaPredicted RBP17.56■□□□□ 0.4
HCFC2-201ENST00000229330 FMN1Q68DA7 1419 aa17.55■□□□□ 0.4
HCFC2-201ENST00000229330 RALBP1Q15311 655 aa17.55■□□□□ 0.4
HCFC2-201ENST00000229330 KTN1Q86UP2 1357 aaKnown RBP17.55■□□□□ 0.4
HCFC2-201ENST00000229330 PRKCSHP14314 528 aaPredicted RBP17.55■□□□□ 0.4
HCFC2-201ENST00000229330 RAPGEF2Q9Y4G8 1499 aa17.54■□□□□ 0.4
HCFC2-201ENST00000229330 CARMIL2Q6F5E8 1435 aa17.54■□□□□ 0.4
HCFC2-201ENST00000229330 ZBED9Q6R2W3 1325 aa17.53■□□□□ 0.4
HCFC2-201ENST00000229330 KIAA2012Q0VF49 1180 aa17.53■□□□□ 0.4
HCFC2-201ENST00000229330 PDE3BQ13370 1112 aa17.52■□□□□ 0.4
HCFC2-201ENST00000229330 MAPK8IP3Q9UPT6 1336 aa17.52■□□□□ 0.4
HCFC2-201ENST00000229330 GOLGA6L6A8MZA4 724 aa17.52■□□□□ 0.4
HCFC2-201ENST00000229330 SLC4A3P48751 1232 aa17.52■□□□□ 0.4
HCFC2-201ENST00000229330 TMF1P82094 1093 aa17.52■□□□□ 0.39
HCFC2-201ENST00000229330 RUSC2Q8N2Y8 1516 aa17.5■□□□□ 0.39
HCFC2-201ENST00000229330 RWDD1Q9H446 243 aaPredicted RBP17.49■□□□□ 0.39
HCFC2-201ENST00000229330 ZBTB7CA1YPR0 619 aa17.48■□□□□ 0.39
HCFC2-201ENST00000229330 FAM161AQ3B820 660 aa17.48■□□□□ 0.39
HCFC2-201ENST00000229330 DCAF11Q8TEB1 546 aa17.48■□□□□ 0.39
HCFC2-201ENST00000229330 NRDCO43847 1150 aa17.47■□□□□ 0.39
HCFC2-201ENST00000229330 FHOD3Q2V2M9 1422 aa17.47■□□□□ 0.39
HCFC2-201ENST00000229330 CFAP44Q96MT7 982 aa17.47■□□□□ 0.39
HCFC2-201ENST00000229330 FANCD2Q9BXW9 1451 aa17.46■□□□□ 0.39
HCFC2-201ENST00000229330 PMFBP1Q8TBY8 1022 aa17.45■□□□□ 0.38
HCFC2-201ENST00000229330 EXOC6Q8TAG9 804 aa17.45■□□□□ 0.38
HCFC2-201ENST00000229330 DDX11L8A8MPP1 907 aa17.44■□□□□ 0.38
HCFC2-201ENST00000229330 MFAP1P55081 439 aaKnown RBP17.44■□□□□ 0.38
HCFC2-201ENST00000229330 RRP1P56182 461 aaKnown RBP17.44■□□□□ 0.38
HCFC2-201ENST00000229330 CENPQQ7L2Z9 268 aaPredicted RBP17.44■□□□□ 0.38
HCFC2-201ENST00000229330 PRKRIP1Q9H875 184 aaPredicted RBP17.44■□□□□ 0.38
HCFC2-201ENST00000229330 DRC7Q8IY82 874 aa17.43■□□□□ 0.38
HCFC2-201ENST00000229330 IL27Q8NEV9 243 aa17.42■□□□□ 0.38
HCFC2-201ENST00000229330 GOLGA6L4A6NEF3 574 aa17.42■□□□□ 0.38
HCFC2-201ENST00000229330 FOXD1Q16676 465 aa17.41■□□□□ 0.38
HCFC2-201ENST00000229330 CALD1Q05682 793 aaKnown RBP17.41■□□□□ 0.38
HCFC2-201ENST00000229330 MPHOSPH9Q99550 1183 aa17.4■□□□□ 0.38
HCFC2-201ENST00000229330 MCCP23508 829 aa17.4■□□□□ 0.38
HCFC2-201ENST00000229330 PKD2Q13563 968 aa17.4■□□□□ 0.38
HCFC2-201ENST00000229330 SYAP1Q96A49 352 aaPredicted RBP17.4■□□□□ 0.38
HCFC2-201ENST00000229330 KANK1Q14678 1352 aa17.39■□□□□ 0.38
HCFC2-201ENST00000229330 NLRP13Q86W25 1043 aa17.39■□□□□ 0.37
HCFC2-201ENST00000229330 GOLGA2Q08379 1002 aa17.39■□□□□ 0.37
HCFC2-201ENST00000229330 NFKBIBQ15653 356 aa17.39■□□□□ 0.37
HCFC2-201ENST00000229330 L3MBTL2Q969R5 705 aa17.39■□□□□ 0.37
HCFC2-201ENST00000229330 C14orf37Q86TY3 774 aa17.37■□□□□ 0.37
HCFC2-201ENST00000229330 U2SURPO15042 1029 aaKnown RBP17.37■□□□□ 0.37
HCFC2-201ENST00000229330 PKNOX2Q96KN3 472 aa17.37■□□□□ 0.37
HCFC2-201ENST00000229330 ROCK2O75116 1388 aaKnown RBP17.36■□□□□ 0.37
HCFC2-201ENST00000229330 TNNT3P45378 269 aaPredicted RBP17.35■□□□□ 0.37
HCFC2-201ENST00000229330 POGKQ9P215 609 aa17.35■□□□□ 0.37
HCFC2-201ENST00000229330 PLEKHG5O94827 1062 aa17.35■□□□□ 0.37
HCFC2-201ENST00000229330 BRPF3Q9ULD4 1205 aa17.35■□□□□ 0.37
HCFC2-201ENST00000229330 IPO8O15397 1037 aaKnown RBP17.34■□□□□ 0.37
HCFC2-201ENST00000229330 SKOR2Q2VWA4 1001 aaPredicted RBP17.34■□□□□ 0.37
HCFC2-201ENST00000229330 JPH4Q96JJ6 628 aa17.34■□□□□ 0.37
HCFC2-201ENST00000229330 CRBNQ96SW2 442 aa17.34■□□□□ 0.37
HCFC2-201ENST00000229330 PAK3O75914 559 aaPredicted RBP17.33■□□□□ 0.37
HCFC2-201ENST00000229330 PLIN1O60240 522 aa17.33■□□□□ 0.36
HCFC2-201ENST00000229330 EFCAB2Q5VUJ9 269 aa17.33■□□□□ 0.36
HCFC2-201ENST00000229330 MYBBP1AQ9BQG0 1328 aaKnown RBP17.32■□□□□ 0.36
HCFC2-201ENST00000229330 ANKRD30AQ9BXX3 1397 aa17.32■□□□□ 0.36
HCFC2-201ENST00000229330 KIF15Q9NS87 1388 aa17.32■□□□□ 0.36
HCFC2-201ENST00000229330 ITPRIPQ8IWB1 547 aa17.32■□□□□ 0.36
HCFC2-201ENST00000229330 PHLDB1Q86UU1 1377 aa17.32■□□□□ 0.36
HCFC2-201ENST00000229330 NUP155O75694 1391 aa17.31■□□□□ 0.36
HCFC2-201ENST00000229330 MORC1Q86VD1 984 aa17.31■□□□□ 0.36
HCFC2-201ENST00000229330 FOXD4L1Q9NU39 408 aa17.31■□□□□ 0.36
HCFC2-201ENST00000229330 GGT6Q6P531 493 aa17.3■□□□□ 0.36
HCFC2-201ENST00000229330 NCAPD3P42695 1498 aa17.3■□□□□ 0.36
HCFC2-201ENST00000229330 FGD5Q6ZNL6 1462 aa17.3■□□□□ 0.36
HCFC2-201ENST00000229330 KCNJ4P48050 445 aa17.3■□□□□ 0.36
HCFC2-201ENST00000229330 CCDC18Q5T9S5 1454 aa17.29■□□□□ 0.36
HCFC2-201ENST00000229330 CENPJQ9HC77 1338 aaPredicted RBP17.29■□□□□ 0.36
HCFC2-201ENST00000229330 FAM43AQ8N2R8 423 aa17.28■□□□□ 0.36
HCFC2-201ENST00000229330 MLECQ14165 292 aa17.28■□□□□ 0.36
HCFC2-201ENST00000229330 DDX49Q9Y6V7 483 aaKnown RBP17.28■□□□□ 0.36
HCFC2-201ENST00000229330 FAM13BQ9NYF5 915 aa17.27■□□□□ 0.36
HCFC2-201ENST00000229330 IGF1RP08069 1367 aa17.27■□□□□ 0.36
HCFC2-201ENST00000229330 HNRNPMP52272 730 aaKnown RBP eCLIP17.27■□□□□ 0.35
HCFC2-201ENST00000229330 FGD1P98174 961 aa17.26■□□□□ 0.35
HCFC2-201ENST00000229330 MSH5O43196 834 aa17.26■□□□□ 0.35
HCFC2-201ENST00000229330 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.25■□□□□ 0.35
HCFC2-201ENST00000229330 CHMP5Q9NZZ3 219 aa17.24■□□□□ 0.35
HCFC2-201ENST00000229330 PHF14O94880 888 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms