RNA–Protein interactions for RNA: ENST00000228955.11

GTF2H3-201, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 2 BASIC

Gene GTF2H3, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-201ENST00000228955 CDK11AQ9UQ88 783 aaPredicted RBP11.08□□□□□ -0.64
GTF2H3-201ENST00000228955 FRMPD1Q5SYB0 1578 aa11.08□□□□□ -0.64
GTF2H3-201ENST00000228955 SCAPERQ9BY12 1400 aa11.08□□□□□ -0.64
GTF2H3-201ENST00000228955 DENND4BO75064 1496 aaPredicted RBP11.07□□□□□ -0.64
GTF2H3-201ENST00000228955 PCF11O94913 1555 aaKnown RBP11.07□□□□□ -0.64
GTF2H3-201ENST00000228955 CLIP1P30622 1438 aa11.07□□□□□ -0.64
GTF2H3-201ENST00000228955 YEATS2Q9ULM3 1422 aa11.07□□□□□ -0.64
GTF2H3-201ENST00000228955 NEO1Q92859 1461 aa11.07□□□□□ -0.64
GTF2H3-201ENST00000228955 EFCAB2Q5VUJ9 269 aa11.06□□□□□ -0.64
GTF2H3-201ENST00000228955 HECW2Q9P2P5 1572 aa11.05□□□□□ -0.64
GTF2H3-201ENST00000228955 CNKSR2Q8WXI2 1034 aa11.05□□□□□ -0.64
GTF2H3-201ENST00000228955 ARHGAP5Q13017 1502 aa11.04□□□□□ -0.64
GTF2H3-201ENST00000228955 PLCH2O75038 1416 aa11.03□□□□□ -0.64
GTF2H3-201ENST00000228955 TROQ12816 1431 aaPredicted RBP11.03□□□□□ -0.64
GTF2H3-201ENST00000228955 CEBPAP49715 358 aaPredicted RBP11.02□□□□□ -0.65
GTF2H3-201ENST00000228955 HSPA2P54652 639 aa11.02□□□□□ -0.65
GTF2H3-201ENST00000228955 RICTORQ6R327 1708 aa11.01□□□□□ -0.65
GTF2H3-201ENST00000228955 PHLDB1Q86UU1 1377 aa11.01□□□□□ -0.65
GTF2H3-201ENST00000228955 HNRNPMP52272 730 aaKnown RBP eCLIP11.01□□□□□ -0.65
GTF2H3-201ENST00000228955 SIGLEC1Q9BZZ2 1709 aa11.01□□□□□ -0.65
GTF2H3-201ENST00000228955 MADDQ8WXG6 1647 aa11.01□□□□□ -0.65
GTF2H3-201ENST00000228955 CASKIN1Q8WXD9 1431 aa11.01□□□□□ -0.65
GTF2H3-201ENST00000228955 MYO5CQ9NQX4 1742 aa11□□□□□ -0.65
GTF2H3-201ENST00000228955 PTPRMP28827 1452 aa11□□□□□ -0.65
GTF2H3-201ENST00000228955 NCBP3Q53F19 620 aaKnown RBP11□□□□□ -0.65
GTF2H3-201ENST00000228955 RIMS1Q86UR5 1692 aaKnown RBP10.99□□□□□ -0.65
GTF2H3-201ENST00000228955 ZFYVE16Q7Z3T8 1539 aa10.99□□□□□ -0.65
GTF2H3-201ENST00000228955 ILDR1Q86SU0 546 aaPredicted RBP10.99□□□□□ -0.65
GTF2H3-201ENST00000228955 POGZQ7Z3K3 1410 aa10.98□□□□□ -0.65
GTF2H3-201ENST00000228955 CFAP74Q9C0B2 1584 aa10.98□□□□□ -0.65
GTF2H3-201ENST00000228955 ARHGEF40Q8TER5 1519 aa10.98□□□□□ -0.65
GTF2H3-201ENST00000228955 BCORL1Q5H9F3 1711 aa10.98□□□□□ -0.65
GTF2H3-201ENST00000228955 CEP162Q5TB80 1403 aa10.97□□□□□ -0.65
GTF2H3-201ENST00000228955 TRAPPC8Q9Y2L5 1435 aa10.97□□□□□ -0.65
GTF2H3-201ENST00000228955 ZNF644Q9H582 1327 aaPredicted RBP10.97□□□□□ -0.65
GTF2H3-201ENST00000228955 ADAMTSL3P82987 1691 aa10.96□□□□□ -0.65
GTF2H3-201ENST00000228955 CDC42BPBQ9Y5S2 1711 aa10.96□□□□□ -0.66
GTF2H3-201ENST00000228955 MTUS2Q5JR59 1369 aa10.96□□□□□ -0.66
GTF2H3-201ENST00000228955 ARHGEF12Q9NZN5 1544 aa10.96□□□□□ -0.66
GTF2H3-201ENST00000228955 POTEHQ6S545 545 aa10.95□□□□□ -0.66
GTF2H3-201ENST00000228955 CFDP1Q9UEE9 299 aaPredicted RBP10.95□□□□□ -0.66
GTF2H3-201ENST00000228955 CCDC18Q5T9S5 1454 aa10.95□□□□□ -0.66
GTF2H3-201ENST00000228955 FYCO1Q9BQS8 1478 aa10.94□□□□□ -0.66
GTF2H3-201ENST00000228955 CCNB3Q8WWL7 1395 aa10.93□□□□□ -0.66
GTF2H3-201ENST00000228955 ATP10AO60312 1499 aa10.92□□□□□ -0.66
GTF2H3-201ENST00000228955 ESF1Q9H501 851 aaKnown RBP10.92□□□□□ -0.66
GTF2H3-201ENST00000228955 CDC42BPAQ5VT25 1732 aa10.91□□□□□ -0.66
GTF2H3-201ENST00000228955 ZMYM4Q5VZL5 1548 aa10.91□□□□□ -0.66
GTF2H3-201ENST00000228955 C9orf84Q5VXU9 1444 aa10.91□□□□□ -0.66
GTF2H3-201ENST00000228955 SPAG9O60271 1321 aaKnown RBP10.9□□□□□ -0.66
GTF2H3-201ENST00000228955 ZNF518AQ6AHZ1 1483 aa10.9□□□□□ -0.66
GTF2H3-201ENST00000228955 KCNA4P22459 653 aa10.9□□□□□ -0.66
GTF2H3-201ENST00000228955 PREX2Q70Z35 1606 aa10.9□□□□□ -0.66
GTF2H3-201ENST00000228955 SYCP2Q9BX26 1530 aa10.9□□□□□ -0.66
GTF2H3-201ENST00000228955 FER1L4A9Z1Z3 1794 aa10.9□□□□□ -0.67
GTF2H3-201ENST00000228955 GGT6Q6P531 493 aa10.89□□□□□ -0.67
GTF2H3-201ENST00000228955 RNF39Q9H2S5 420 aa10.89□□□□□ -0.67
GTF2H3-201ENST00000228955 GPATCH8Q9UKJ3 1502 aaKnown RBP10.89□□□□□ -0.67
GTF2H3-201ENST00000228955 ABCA6Q8N139 1617 aa10.89□□□□□ -0.67
GTF2H3-201ENST00000228955 DCAF8L1A6NGE4 600 aa10.88□□□□□ -0.67
GTF2H3-201ENST00000228955 SAMD9LQ8IVG5 1584 aa10.88□□□□□ -0.67
GTF2H3-201ENST00000228955 ABCC1P33527 1531 aa10.88□□□□□ -0.67
GTF2H3-201ENST00000228955 ITSN2Q9NZM3 1697 aa10.88□□□□□ -0.67
GTF2H3-201ENST00000228955 KANK4Q5T7N3 995 aaPredicted RBP10.87□□□□□ -0.67
GTF2H3-201ENST00000228955 DIP2CQ9Y2E4 1556 aa10.87□□□□□ -0.67
GTF2H3-201ENST00000228955 MAGI2Q86UL8 1455 aa10.87□□□□□ -0.67
GTF2H3-201ENST00000228955 RNF216Q9NWF9 866 aaPredicted RBP10.87□□□□□ -0.67
GTF2H3-201ENST00000228955 LMTK3Q96Q04 1460 aa10.86□□□□□ -0.67
GTF2H3-201ENST00000228955 PPARGC1BQ86YN6 1023 aaKnown RBP10.86□□□□□ -0.67
GTF2H3-201ENST00000228955 SUPT6HQ7KZ85 1726 aaKnown RBP10.86□□□□□ -0.67
GTF2H3-201ENST00000228955 HOXD11P31277 338 aaPredicted RBP10.85□□□□□ -0.67
GTF2H3-201ENST00000228955 KIDINS220Q9ULH0 1771 aa10.84□□□□□ -0.67
GTF2H3-201ENST00000228955 KDM5CP41229 1560 aa10.84□□□□□ -0.67
GTF2H3-201ENST00000228955 TIAM1Q13009 1591 aa10.83□□□□□ -0.68
GTF2H3-201ENST00000228955 NPM3O75607 178 aaKnown RBP10.83□□□□□ -0.68
GTF2H3-201ENST00000228955 NCOA2Q15596 1464 aa10.81□□□□□ -0.68
GTF2H3-201ENST00000228955 MLH3Q9UHC1 1453 aa10.81□□□□□ -0.68
GTF2H3-201ENST00000228955 EHBP1L1Q8N3D4 1523 aa10.8□□□□□ -0.68
GTF2H3-201ENST00000228955 KIF3BO15066 747 aa10.8□□□□□ -0.68
GTF2H3-201ENST00000228955 APLP2Q06481 763 aa10.8□□□□□ -0.68
GTF2H3-201ENST00000228955 ATP7AQ04656 1500 aa10.79□□□□□ -0.68
GTF2H3-201ENST00000228955 VPS8Q8N3P4 1428 aa10.79□□□□□ -0.68
GTF2H3-201ENST00000228955 C3P01024 1663 aa10.78□□□□□ -0.68
GTF2H3-201ENST00000228955 A2MP01023 1474 aa10.77□□□□□ -0.68
GTF2H3-201ENST00000228955 CAMSAP2Q08AD1 1489 aa10.77□□□□□ -0.68
GTF2H3-201ENST00000228955 NCKAP5LQ9HCH0 1330 aa10.77□□□□□ -0.69
GTF2H3-201ENST00000228955 FBXO31Q5XUX0 539 aaPredicted RBP10.77□□□□□ -0.69
GTF2H3-201ENST00000228955 CHIC2Q9UKJ5 165 aa10.77□□□□□ -0.69
GTF2H3-201ENST00000228955 UHRF1BP1Q6BDS2 1440 aa10.77□□□□□ -0.69
GTF2H3-201ENST00000228955 ZMYM3Q14202 1370 aa10.76□□□□□ -0.69
GTF2H3-201ENST00000228955 LRRC9Q6ZRR7 1453 aa10.76□□□□□ -0.69
GTF2H3-201ENST00000228955 CLTCQ00610 1675 aaKnown RBP10.76□□□□□ -0.69
GTF2H3-201ENST00000228955 TSPY4P0CV99 314 aa10.75□□□□□ -0.69
GTF2H3-201ENST00000228955 TSPY10P0CW01 314 aa10.75□□□□□ -0.69
GTF2H3-201ENST00000228955 MBD5Q9P267 1494 aa10.75□□□□□ -0.69
GTF2H3-201ENST00000228955 PLEKHH2Q8IVE3 1493 aa10.74□□□□□ -0.69
GTF2H3-201ENST00000228955 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.74□□□□□ -0.69
GTF2H3-201ENST00000228955 RRP7BPQ9NSQ0 103 aa10.74□□□□□ -0.69
GTF2H3-201ENST00000228955 KIAA1107Q9UPP5 1409 aa10.74□□□□□ -0.69
GTF2H3-201ENST00000228955 PREX1Q8TCU6 1659 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms