RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 POGZQ7Z3K3 1410 aa29.2■■■□□ 2.26
PFN1-201ENST00000225655 SCAPERQ9BY12 1400 aa29.2■■■□□ 2.26
PFN1-201ENST00000225655 EFCAB2Q5VUJ9 269 aa29.19■■■□□ 2.26
PFN1-201ENST00000225655 ZFYVE16Q7Z3T8 1539 aa29.18■■■□□ 2.26
PFN1-201ENST00000225655 ARID4BQ4LE39 1312 aaPredicted RBP29.17■■■□□ 2.26
PFN1-201ENST00000225655 FYCO1Q9BQS8 1478 aa29.17■■■□□ 2.26
PFN1-201ENST00000225655 PTPRMP28827 1452 aa29.15■■■□□ 2.26
PFN1-201ENST00000225655 YEATS2Q9ULM3 1422 aa29.13■■■□□ 2.25
PFN1-201ENST00000225655 ARHGAP5Q13017 1502 aa29.13■■■□□ 2.25
PFN1-201ENST00000225655 MADDQ8WXG6 1647 aa29.12■■■□□ 2.25
PFN1-201ENST00000225655 CDC42BPBQ9Y5S2 1711 aa29.09■■■□□ 2.25
PFN1-201ENST00000225655 SIGLEC1Q9BZZ2 1709 aa29.07■■■□□ 2.24
PFN1-201ENST00000225655 PREX2Q70Z35 1606 aa29.06■■■□□ 2.24
PFN1-201ENST00000225655 ZNF518AQ6AHZ1 1483 aa29.05■■■□□ 2.24
PFN1-201ENST00000225655 KDM5CP41229 1560 aa29.03■■■□□ 2.24
PFN1-201ENST00000225655 RIMS1Q86UR5 1692 aaKnown RBP29.02■■■□□ 2.24
PFN1-201ENST00000225655 ATP10AO60312 1499 aa29.01■■■□□ 2.23
PFN1-201ENST00000225655 CDC42BPAQ5VT25 1732 aa28.99■■■□□ 2.23
PFN1-201ENST00000225655 C9orf84Q5VXU9 1444 aa28.98■■■□□ 2.23
PFN1-201ENST00000225655 AFAP1Q8N556 730 aa28.97■■■□□ 2.23
PFN1-201ENST00000225655 ABCC1P33527 1531 aa28.96■■■□□ 2.23
PFN1-201ENST00000225655 ITSN2Q9NZM3 1697 aa28.93■■■□□ 2.22
PFN1-201ENST00000225655 ARHGEF12Q9NZN5 1544 aa28.92■■■□□ 2.22
PFN1-201ENST00000225655 FER1L4A9Z1Z3 1794 aa28.91■■■□□ 2.22
PFN1-201ENST00000225655 MLH3Q9UHC1 1453 aa28.91■■■□□ 2.22
PFN1-201ENST00000225655 CEP162Q5TB80 1403 aa28.9■■■□□ 2.22
PFN1-201ENST00000225655 TRAPPC8Q9Y2L5 1435 aa28.89■■■□□ 2.22
PFN1-201ENST00000225655 MLECQ14165 292 aa28.89■■■□□ 2.22
PFN1-201ENST00000225655 DIP2CQ9Y2E4 1556 aa28.88■■■□□ 2.21
PFN1-201ENST00000225655 GPATCH8Q9UKJ3 1502 aaKnown RBP28.88■■■□□ 2.21
PFN1-201ENST00000225655 REREQ9P2R6 1566 aa28.88■■■□□ 2.21
PFN1-201ENST00000225655 LMTK3Q96Q04 1460 aa28.85■■■□□ 2.21
PFN1-201ENST00000225655 ABCA6Q8N139 1617 aa28.85■■■□□ 2.21
PFN1-201ENST00000225655 MYT1LQ9UL68 1186 aa28.85■■■□□ 2.21
PFN1-201ENST00000225655 SAMD9LQ8IVG5 1584 aa28.84■■■□□ 2.21
PFN1-201ENST00000225655 MTUS2Q5JR59 1369 aa28.83■■■□□ 2.21
PFN1-201ENST00000225655 KIDINS220Q9ULH0 1771 aa28.8■■■□□ 2.2
PFN1-201ENST00000225655 ZNF777Q9ULD5 760 aaPredicted RBP28.79■■■□□ 2.2
PFN1-201ENST00000225655 CCNB3Q8WWL7 1395 aa28.78■■■□□ 2.2
PFN1-201ENST00000225655 SYCP2Q9BX26 1530 aa28.78■■■□□ 2.2
PFN1-201ENST00000225655 AGLP35573 1532 aa28.77■■■□□ 2.2
PFN1-201ENST00000225655 EHBP1L1Q8N3D4 1523 aa28.77■■■□□ 2.2
PFN1-201ENST00000225655 CFDP1Q9UEE9 299 aaPredicted RBP28.76■■■□□ 2.19
PFN1-201ENST00000225655 PLEKHH2Q8IVE3 1493 aa28.76■■■□□ 2.19
PFN1-201ENST00000225655 PLPPR3Q6T4P5 718 aa28.75■■■□□ 2.19
PFN1-201ENST00000225655 KIAA1107Q9UPP5 1409 aa28.75■■■□□ 2.19
PFN1-201ENST00000225655 TIAM1Q13009 1591 aa28.71■■■□□ 2.19
PFN1-201ENST00000225655 HNRNPMP52272 730 aaKnown RBP eCLIP28.7■■■□□ 2.18
PFN1-201ENST00000225655 ILDR1Q86SU0 546 aaPredicted RBP28.7■■■□□ 2.18
PFN1-201ENST00000225655 SPAG9O60271 1321 aaKnown RBP28.68■■■□□ 2.18
PFN1-201ENST00000225655 ATP7AQ04656 1500 aa28.65■■■□□ 2.18
PFN1-201ENST00000225655 PREX1Q8TCU6 1659 aa28.65■■■□□ 2.18
PFN1-201ENST00000225655 LOC105371045A0A1W2PR82 267 aa28.65■■■□□ 2.18
PFN1-201ENST00000225655 INO80Q9ULG1 1556 aaPredicted RBP28.65■■■□□ 2.18
PFN1-201ENST00000225655 CEBPAP49715 358 aaPredicted RBP28.63■■■□□ 2.17
PFN1-201ENST00000225655 HSPA2P54652 639 aa28.63■■■□□ 2.17
PFN1-201ENST00000225655 SUPT6HQ7KZ85 1726 aaKnown RBP28.61■■■□□ 2.17
PFN1-201ENST00000225655 VPS8Q8N3P4 1428 aa28.6■■■□□ 2.17
PFN1-201ENST00000225655 C3P01024 1663 aa28.59■■■□□ 2.17
PFN1-201ENST00000225655 ZNF644Q9H582 1327 aaPredicted RBP28.59■■■□□ 2.17
PFN1-201ENST00000225655 ESF1Q9H501 851 aaKnown RBP28.58■■■□□ 2.17
PFN1-201ENST00000225655 SETD1BQ9UPS6 1966 aaKnown RBP28.58■■■□□ 2.17
PFN1-201ENST00000225655 NCOA2Q15596 1464 aa28.58■■■□□ 2.17
PFN1-201ENST00000225655 PLXNC1O60486 1568 aa28.58■■■□□ 2.17
PFN1-201ENST00000225655 CNTLNQ9NXG0 1405 aa28.57■■■□□ 2.16
PFN1-201ENST00000225655 MBD5Q9P267 1494 aa28.57■■■□□ 2.16
PFN1-201ENST00000225655 A2MP01023 1474 aa28.54■■■□□ 2.16
PFN1-201ENST00000225655 ADGBQ8N7X0 1667 aa28.53■■■□□ 2.16
PFN1-201ENST00000225655 UHRF1BP1Q6BDS2 1440 aa28.52■■■□□ 2.16
PFN1-201ENST00000225655 MROH2AA6NES4 1674 aa28.51■■■□□ 2.16
PFN1-201ENST00000225655 LRRC9Q6ZRR7 1453 aa28.49■■■□□ 2.15
PFN1-201ENST00000225655 RTEL1-TNFRSF6BF6WH68 1400 aa28.49■■■□□ 2.15
PFN1-201ENST00000225655 CAMSAP2Q08AD1 1489 aa28.48■■■□□ 2.15
PFN1-201ENST00000225655 MAP3K1Q13233 1512 aa28.48■■■□□ 2.15
PFN1-201ENST00000225655 CCDC141Q6ZP82 1450 aa28.45■■■□□ 2.14
PFN1-201ENST00000225655 RSPH4AQ5TD94 716 aa28.43■■■□□ 2.14
PFN1-201ENST00000225655 NPATQ14207 1427 aa28.42■■■□□ 2.14
PFN1-201ENST00000225655 CLTCQ00610 1675 aaKnown RBP28.42■■■□□ 2.14
PFN1-201ENST00000225655 ZMYM3Q14202 1370 aa28.41■■■□□ 2.14
PFN1-201ENST00000225655 FBXO41Q8TF61 875 aa28.41■■■□□ 2.14
PFN1-201ENST00000225655 STRCQ7RTU9 1775 aa28.41■■■□□ 2.14
PFN1-201ENST00000225655 ARHGEF5Q12774 1597 aa28.4■■■□□ 2.14
PFN1-201ENST00000225655 PPP6R1Q9UPN7 881 aa28.38■■■□□ 2.13
PFN1-201ENST00000225655 DHX29Q7Z478 1369 aaKnown RBP28.37■■■□□ 2.13
PFN1-201ENST00000225655 GGT6Q6P531 493 aa28.37■■■□□ 2.13
PFN1-201ENST00000225655 KANK4Q5T7N3 995 aaPredicted RBP28.36■■■□□ 2.13
PFN1-201ENST00000225655 DMRT2Q9Y5R5 561 aa28.34■■■□□ 2.13
PFN1-201ENST00000225655 PTPRKQ15262 1439 aa28.29■■■□□ 2.12
PFN1-201ENST00000225655 MYOM3Q5VTT5 1437 aa28.29■■■□□ 2.12
PFN1-201ENST00000225655 MIA2Q96PC5 1412 aa28.29■■■□□ 2.12
PFN1-201ENST00000225655 TSPY4P0CV99 314 aa28.28■■■□□ 2.12
PFN1-201ENST00000225655 TSPY10P0CW01 314 aa28.28■■■□□ 2.12
PFN1-201ENST00000225655 MAST1Q9Y2H9 1570 aa28.26■■■□□ 2.11
PFN1-201ENST00000225655 PTPRTO14522 1441 aa28.26■■■□□ 2.11
PFN1-201ENST00000225655 MYO3AQ8NEV4 1616 aa28.25■■■□□ 2.11
PFN1-201ENST00000225655 FAM135AQ9P2D6 1515 aa28.25■■■□□ 2.11
PFN1-201ENST00000225655 KIF3BO15066 747 aa28.25■■■□□ 2.11
PFN1-201ENST00000225655 ZNF142P52746 1687 aaPredicted RBP28.25■■■□□ 2.11
PFN1-201ENST00000225655 NCOA1Q15788 1441 aa28.25■■■□□ 2.11
PFN1-201ENST00000225655 CERKQ8TCT0 537 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms