RNA–Protein interactions for RNA: ENST00000223073.6

RBM28-201, Transcript of RNA binding motif protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM28, Length 15,507 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-201ENST00000223073 CHMP4AQ9BY43 222 aa8.67□□□□□ -1.02
RBM28-201ENST00000223073 GOLGA6L4A6NEF3 574 aa8.66□□□□□ -1.02
RBM28-201ENST00000223073 MAPK8IP2Q13387 824 aaPredicted RBP8.66□□□□□ -1.02
RBM28-201ENST00000223073 MRE11P49959 708 aa8.66□□□□□ -1.02
RBM28-201ENST00000223073 DRC7Q8IY82 874 aa8.65□□□□□ -1.02
RBM28-201ENST00000223073 MEX3CQ5U5Q3 659 aaKnown RBP8.65□□□□□ -1.02
RBM28-201ENST00000223073 PLCD4Q9BRC7 762 aa8.64□□□□□ -1.03
RBM28-201ENST00000223073 PDCL3Q9H2J4 239 aa8.64□□□□□ -1.03
RBM28-201ENST00000223073 DHX37Q8IY37 1157 aaKnown RBP8.64□□□□□ -1.03
RBM28-201ENST00000223073 CLGNO14967 610 aa8.64□□□□□ -1.03
RBM28-201ENST00000223073 DIAPH3Q9NSV4 1193 aa8.64□□□□□ -1.03
RBM28-201ENST00000223073 CALD1Q05682 793 aaKnown RBP8.64□□□□□ -1.03
RBM28-201ENST00000223073 BCCIPQ9P287 314 aaKnown RBP eCLIP8.63□□□□□ -1.03
RBM28-201ENST00000223073 FBXO3Q9UK99 471 aa8.63□□□□□ -1.03
RBM28-201ENST00000223073 EEA1Q15075 1411 aa8.63□□□□□ -1.03
RBM28-201ENST00000223073 IL27Q8NEV9 243 aa8.62□□□□□ -1.03
RBM28-201ENST00000223073 TPM3P06753 285 aa8.62□□□□□ -1.03
RBM28-201ENST00000223073 PDCL2Q8N4E4 241 aa8.6□□□□□ -1.03
RBM28-201ENST00000223073 CLSTN1O94985 981 aa8.6□□□□□ -1.03
RBM28-201ENST00000223073 SSR1P43307 286 aaKnown RBP8.6□□□□□ -1.03
RBM28-201ENST00000223073 TPM4P67936 248 aa8.59□□□□□ -1.03
RBM28-201ENST00000223073 MCCP23508 829 aa8.59□□□□□ -1.03
RBM28-201ENST00000223073 PDE3BQ13370 1112 aa8.59□□□□□ -1.03
RBM28-201ENST00000223073 TAOK2Q9UL54 1235 aa8.59□□□□□ -1.03
RBM28-201ENST00000223073 PLCB2Q00722 1185 aa8.59□□□□□ -1.03
RBM28-201ENST00000223073 GZF1Q9H116 711 aaPredicted RBP8.59□□□□□ -1.03
RBM28-201ENST00000223073 DEF6Q9H4E7 631 aa8.59□□□□□ -1.03
RBM28-201ENST00000223073 USP8P40818 1118 aa8.59□□□□□ -1.04
RBM28-201ENST00000223073 AEBP1Q8IUX7 1158 aa8.59□□□□□ -1.04
RBM28-201ENST00000223073 CCDC39Q9UFE4 941 aa8.58□□□□□ -1.04
RBM28-201ENST00000223073 FTSJ3Q8IY81 847 aaKnown RBP8.58□□□□□ -1.04
RBM28-201ENST00000223073 ARGLU1Q9NWB6 273 aaPredicted RBP8.57□□□□□ -1.04
RBM28-201ENST00000223073 RDXP35241 583 aaKnown RBP8.57□□□□□ -1.04
RBM28-201ENST00000223073 FAM193AP78312 1265 aa8.57□□□□□ -1.04
RBM28-201ENST00000223073 CDCA8Q53HL2 280 aa8.56□□□□□ -1.04
RBM28-201ENST00000223073 CAVIN1Q6NZI2 390 aaKnown RBP8.56□□□□□ -1.04
RBM28-201ENST00000223073 ACBD3Q9H3P7 528 aa8.56□□□□□ -1.04
RBM28-201ENST00000223073 DHX8Q14562 1220 aaKnown RBP8.56□□□□□ -1.04
RBM28-201ENST00000223073 FAM161AQ3B820 660 aa8.55□□□□□ -1.04
RBM28-201ENST00000223073 AK7Q96M32 723 aa8.55□□□□□ -1.04
RBM28-201ENST00000223073 IPO4Q8TEX9 1081 aaKnown RBP8.55□□□□□ -1.04
RBM28-201ENST00000223073 RWDD1Q9H446 243 aaPredicted RBP8.54□□□□□ -1.04
RBM28-201ENST00000223073 PES1O00541 588 aaKnown RBP8.54□□□□□ -1.04
RBM28-201ENST00000223073 DNAJC2Q99543 621 aaKnown RBP8.54□□□□□ -1.04
RBM28-201ENST00000223073 CCDC173Q0VFZ6 552 aa8.54□□□□□ -1.04
RBM28-201ENST00000223073 PDE4AP27815 886 aa8.54□□□□□ -1.04
RBM28-201ENST00000223073 RCAN3Q9UKA8 241 aa8.54□□□□□ -1.04
RBM28-201ENST00000223073 RGS3P49796 1198 aa8.54□□□□□ -1.04
RBM28-201ENST00000223073 CALCOCO1Q9P1Z2 691 aa8.53□□□□□ -1.04
RBM28-201ENST00000223073 KIF16BQ96L93 1317 aa8.53□□□□□ -1.04
RBM28-201ENST00000223073 KIF3AQ9Y496 699 aa8.53□□□□□ -1.04
RBM28-201ENST00000223073 FAM107BQ9H098 131 aa8.53□□□□□ -1.04
RBM28-201ENST00000223073 CCDC70Q6NSX1 233 aa8.53□□□□□ -1.04
RBM28-201ENST00000223073 MAPK8IP3Q9UPT6 1336 aa8.52□□□□□ -1.05
RBM28-201ENST00000223073 CTR9Q6PD62 1173 aa8.52□□□□□ -1.05
RBM28-201ENST00000223073 NFKBIBQ15653 356 aa8.52□□□□□ -1.05
RBM28-201ENST00000223073 GTPBP4Q9BZE4 634 aaKnown RBP8.52□□□□□ -1.05
RBM28-201ENST00000223073 BRPF3Q9ULD4 1205 aa8.52□□□□□ -1.05
RBM28-201ENST00000223073 PLCD3Q8N3E9 789 aa8.52□□□□□ -1.05
RBM28-201ENST00000223073 ATP6V1DQ9Y5K8 247 aa8.51□□□□□ -1.05
RBM28-201ENST00000223073 ZBTB7CA1YPR0 619 aa8.51□□□□□ -1.05
RBM28-201ENST00000223073 CENPQQ7L2Z9 268 aaPredicted RBP8.51□□□□□ -1.05
RBM28-201ENST00000223073 AAMPQ13685 434 aa8.51□□□□□ -1.05
RBM28-201ENST00000223073 RBM28Q9NW13 759 aaKnown RBP8.51□□□□□ -1.05
RBM28-201ENST00000223073 PMFBP1Q8TBY8 1022 aa8.51□□□□□ -1.05
RBM28-201ENST00000223073 CCDC34Q96HJ3 373 aa8.51□□□□□ -1.05
RBM28-201ENST00000223073 E9PSI1 815 aa8.5□□□□□ -1.05
RBM28-201ENST00000223073 CHMP5Q9NZZ3 219 aa8.5□□□□□ -1.05
RBM28-201ENST00000223073 HSP90B2PQ58FF3 399 aa8.5□□□□□ -1.05
RBM28-201ENST00000223073 RALBP1Q15311 655 aa8.5□□□□□ -1.05
RBM28-201ENST00000223073 MCM5P33992 734 aa8.5□□□□□ -1.05
RBM28-201ENST00000223073 FRAT1Q92837 279 aaPredicted RBP8.5□□□□□ -1.05
RBM28-201ENST00000223073 SLKQ9H2G2 1235 aaPredicted RBP8.5□□□□□ -1.05
RBM28-201ENST00000223073 NOC3LQ8WTT2 800 aaKnown RBP8.49□□□□□ -1.05
RBM28-201ENST00000223073 NUDCQ9Y266 331 aa8.49□□□□□ -1.05
RBM28-201ENST00000223073 NASPP49321 788 aaPredicted RBP8.49□□□□□ -1.05
RBM28-201ENST00000223073 CNPY4Q8N129 248 aa8.49□□□□□ -1.05
RBM28-201ENST00000223073 LETM1O95202 739 aaPredicted RBP8.49□□□□□ -1.05
RBM28-201ENST00000223073 ZHX1Q9UKY1 873 aaPredicted RBP8.49□□□□□ -1.05
RBM28-201ENST00000223073 MNS1Q8NEH6 495 aa8.49□□□□□ -1.05
RBM28-201ENST00000223073 ERCC4Q92889 916 aaPredicted RBP8.49□□□□□ -1.05
RBM28-201ENST00000223073 CCP110O43303 1012 aa8.49□□□□□ -1.05
RBM28-201ENST00000223073 C11orf95C9JLR9 678 aaPredicted RBP8.49□□□□□ -1.05
RBM28-201ENST00000223073 IPO8O15397 1037 aaKnown RBP8.48□□□□□ -1.05
RBM28-201ENST00000223073 TMX4Q9H1E5 349 aaPredicted RBP8.48□□□□□ -1.05
RBM28-201ENST00000223073 LEKR1Q6ZMV7 388 aa8.48□□□□□ -1.05
RBM28-201ENST00000223073 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.48□□□□□ -1.05
RBM28-201ENST00000223073 ESPNB1AK53 854 aa8.48□□□□□ -1.05
RBM28-201ENST00000223073 HMMRO75330 724 aa8.48□□□□□ -1.05
RBM28-201ENST00000223073 ST18O60284 1047 aa8.48□□□□□ -1.05
RBM28-201ENST00000223073 PAIP2Q9BPZ3 127 aaKnown RBP8.48□□□□□ -1.05
RBM28-201ENST00000223073 CHMP4CQ96CF2 233 aa8.47□□□□□ -1.05
RBM28-201ENST00000223073 DYNC1I1O14576 645 aa8.47□□□□□ -1.05
RBM28-201ENST00000223073 DCTN1Q14203 1278 aa8.47□□□□□ -1.05
RBM28-201ENST00000223073 KNSTRNQ9Y448 316 aa8.46□□□□□ -1.05
RBM28-201ENST00000223073 TPM1P09493 284 aa8.46□□□□□ -1.05
RBM28-201ENST00000223073 RNF20Q5VTR2 975 aa8.46□□□□□ -1.05
RBM28-201ENST00000223073 GPATCH11Q8N954 259 aa8.46□□□□□ -1.06
RBM28-201ENST00000223073 HDAC5Q9UQL6 1122 aa8.46□□□□□ -1.06
RBM28-201ENST00000223073 CDR1P51861 262 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms