RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 ARHGAP5Q13017 1502 aa20.32■□□□□ 0.84
TIMP1-201ENST00000218388 CDC42BPBQ9Y5S2 1711 aa20.32■□□□□ 0.84
TIMP1-201ENST00000218388 MYOM3Q5VTT5 1437 aa20.31■□□□□ 0.84
TIMP1-201ENST00000218388 PPRC1Q5VV67 1664 aaKnown RBP20.3■□□□□ 0.84
TIMP1-201ENST00000218388 CFDP1Q9UEE9 299 aaPredicted RBP20.29■□□□□ 0.84
TIMP1-201ENST00000218388 FANCAO15360 1455 aa20.29■□□□□ 0.84
TIMP1-201ENST00000218388 EFCAB2Q5VUJ9 269 aa20.28■□□□□ 0.84
TIMP1-201ENST00000218388 PHLDB1Q86UU1 1377 aa20.28■□□□□ 0.84
TIMP1-201ENST00000218388 MIA2Q96PC5 1412 aa20.27■□□□□ 0.84
TIMP1-201ENST00000218388 NEO1Q92859 1461 aa20.27■□□□□ 0.84
TIMP1-201ENST00000218388 FGD6Q6ZV73 1430 aa20.23■□□□□ 0.83
TIMP1-201ENST00000218388 PLEKHH2Q8IVE3 1493 aa20.23■□□□□ 0.83
TIMP1-201ENST00000218388 ZNF777Q9ULD5 760 aaPredicted RBP20.22■□□□□ 0.83
TIMP1-201ENST00000218388 AKNAQ7Z591 1439 aa20.21■□□□□ 0.83
TIMP1-201ENST00000218388 SAMD9LQ8IVG5 1584 aa20.21■□□□□ 0.83
TIMP1-201ENST00000218388 PTPN23Q9H3S7 1636 aa20.2■□□□□ 0.82
TIMP1-201ENST00000218388 ADGRL1O94910 1474 aa20.19■□□□□ 0.82
TIMP1-201ENST00000218388 CAMSAP2Q08AD1 1489 aa20.18■□□□□ 0.82
TIMP1-201ENST00000218388 ABCC1P33527 1531 aa20.18■□□□□ 0.82
TIMP1-201ENST00000218388 KIAA1107Q9UPP5 1409 aa20.16■□□□□ 0.82
TIMP1-201ENST00000218388 TCOF1Q13428 1488 aaKnown RBP20.16■□□□□ 0.82
TIMP1-201ENST00000218388 SYCP2Q9BX26 1530 aa20.14■□□□□ 0.81
TIMP1-201ENST00000218388 SCAPERQ9BY12 1400 aa20.14■□□□□ 0.81
TIMP1-201ENST00000218388 RRBP1Q9P2E9 1410 aaKnown RBP20.14■□□□□ 0.81
TIMP1-201ENST00000218388 DENND4BO75064 1496 aaPredicted RBP20.13■□□□□ 0.81
TIMP1-201ENST00000218388 KDM6BO15054 1643 aa20.13■□□□□ 0.81
TIMP1-201ENST00000218388 ZNF644Q9H582 1327 aaPredicted RBP20.12■□□□□ 0.81
TIMP1-201ENST00000218388 FAM50AQ14320 339 aaKnown RBP20.11■□□□□ 0.81
TIMP1-201ENST00000218388 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.1■□□□□ 0.811e-10■■■□□ 16
TIMP1-201ENST00000218388 ARHGEF5Q12774 1597 aa20.1■□□□□ 0.81
TIMP1-201ENST00000218388 RSPH4AQ5TD94 716 aa20.1■□□□□ 0.81
TIMP1-201ENST00000218388 ZNF518AQ6AHZ1 1483 aa20.1■□□□□ 0.81
TIMP1-201ENST00000218388 POGZQ7Z3K3 1410 aa20.1■□□□□ 0.81
TIMP1-201ENST00000218388 ARHGEF12Q9NZN5 1544 aa20.08■□□□□ 0.81
TIMP1-201ENST00000218388 CCDC141Q6ZP82 1450 aa20.08■□□□□ 0.81
TIMP1-201ENST00000218388 HNRNPMP52272 730 aaKnown RBP eCLIP20.08■□□□□ 0.81
TIMP1-201ENST00000218388 RICTORQ6R327 1708 aa20.07■□□□□ 0.8
TIMP1-201ENST00000218388 MBD5Q9P267 1494 aa20.07■□□□□ 0.8
TIMP1-201ENST00000218388 DNMT1P26358 1616 aaKnown RBP20.06■□□□□ 0.8
TIMP1-201ENST00000218388 TRAPPC8Q9Y2L5 1435 aa20.04■□□□□ 0.8
TIMP1-201ENST00000218388 COL17A1Q9UMD9 1497 aaPredicted RBP20.04■□□□□ 0.8
TIMP1-201ENST00000218388 KDM5CP41229 1560 aa20.04■□□□□ 0.8
TIMP1-201ENST00000218388 FRMPD1Q5SYB0 1578 aa20.04■□□□□ 0.8
TIMP1-201ENST00000218388 RAPGEF3O95398 923 aa20.03■□□□□ 0.8
TIMP1-201ENST00000218388 CROCC2H7BZ55 1655 aa20.03■□□□□ 0.8
TIMP1-201ENST00000218388 DAPK1P53355 1430 aa20.02■□□□□ 0.8
TIMP1-201ENST00000218388 TSPY4P0CV99 314 aa20.02■□□□□ 0.8
TIMP1-201ENST00000218388 TSPY10P0CW01 314 aa20.02■□□□□ 0.8
TIMP1-201ENST00000218388 ZMYM4Q5VZL5 1548 aa20.02■□□□□ 0.79
TIMP1-201ENST00000218388 SHANK2Q9UPX8 1470 aa20.01■□□□□ 0.79
TIMP1-201ENST00000218388 AFAP1Q8N556 730 aa20.01■□□□□ 0.79
TIMP1-201ENST00000218388 HECW2Q9P2P5 1572 aa20■□□□□ 0.79
TIMP1-201ENST00000218388 PHF23Q9BUL5 403 aaPredicted RBP20■□□□□ 0.79
TIMP1-201ENST00000218388 ABCC5O15440 1437 aa20■□□□□ 0.79
TIMP1-201ENST00000218388 SPAG9O60271 1321 aaKnown RBP20■□□□□ 0.79
TIMP1-201ENST00000218388 MAGI2Q86UL8 1455 aa19.99■□□□□ 0.79
TIMP1-201ENST00000218388 MYT1LQ9UL68 1186 aa19.98■□□□□ 0.79
TIMP1-201ENST00000218388 MAST1Q9Y2H9 1570 aa19.98■□□□□ 0.79
TIMP1-201ENST00000218388 MLH3Q9UHC1 1453 aa19.98■□□□□ 0.79
TIMP1-201ENST00000218388 INO80Q9ULG1 1556 aaPredicted RBP19.97■□□□□ 0.79
TIMP1-201ENST00000218388 C9orf84Q5VXU9 1444 aa19.97■□□□□ 0.79
TIMP1-201ENST00000218388 ATP7AQ04656 1500 aa19.97■□□□□ 0.79
TIMP1-201ENST00000218388 RTEL1-TNFRSF6BF6WH68 1400 aa19.96■□□□□ 0.79
TIMP1-201ENST00000218388 ZFYVE16Q7Z3T8 1539 aa19.96■□□□□ 0.79
TIMP1-201ENST00000218388 ADGBQ8N7X0 1667 aa19.95■□□□□ 0.78
TIMP1-201ENST00000218388 ITGAEP38570 1179 aa19.94■□□□□ 0.78
TIMP1-201ENST00000218388 KIDINS220Q9ULH0 1771 aa19.93■□□□□ 0.78
TIMP1-201ENST00000218388 SENP3Q9H4L4 574 aaPredicted RBP19.92■□□□□ 0.78
TIMP1-201ENST00000218388 ARHGEF40Q8TER5 1519 aa19.92■□□□□ 0.78
TIMP1-201ENST00000218388 PLXNC1O60486 1568 aa19.91■□□□□ 0.78
TIMP1-201ENST00000218388 TRIM26Q12899 539 aaPredicted RBP19.91■□□□□ 0.78
TIMP1-201ENST00000218388 ANKRD30AQ9BXX3 1397 aa19.91■□□□□ 0.78
TIMP1-201ENST00000218388 ADGRL2O95490 1459 aa19.9■□□□□ 0.78
TIMP1-201ENST00000218388 CHIC2Q9UKJ5 165 aa19.89■□□□□ 0.77
TIMP1-201ENST00000218388 ABCA6Q8N139 1617 aa19.88■□□□□ 0.77
TIMP1-201ENST00000218388 PTPRKQ15262 1439 aa19.88■□□□□ 0.77
TIMP1-201ENST00000218388 ROCK1Q13464 1354 aa19.88■□□□□ 0.77
TIMP1-201ENST00000218388 DIP2CQ9Y2E4 1556 aa19.87■□□□□ 0.77
TIMP1-201ENST00000218388 YEATS2Q9ULM3 1422 aa19.87■□□□□ 0.77
TIMP1-201ENST00000218388 NCOA1Q15788 1441 aa19.85■□□□□ 0.77
TIMP1-201ENST00000218388 ATP10AO60312 1499 aa19.85■□□□□ 0.77
TIMP1-201ENST00000218388 KIF15Q9NS87 1388 aa19.84■□□□□ 0.77
TIMP1-201ENST00000218388 REREQ9P2R6 1566 aa19.83■□□□□ 0.77
TIMP1-201ENST00000218388 DUOX2Q9NRD8 1548 aa19.83■□□□□ 0.77
TIMP1-201ENST00000218388 A2MP01023 1474 aa19.82■□□□□ 0.76
TIMP1-201ENST00000218388 RRP7BPQ9NSQ0 103 aa19.81■□□□□ 0.76
TIMP1-201ENST00000218388 GCC2Q8IWJ2 1684 aa19.8■□□□□ 0.76
TIMP1-201ENST00000218388 DHX29Q7Z478 1369 aaKnown RBP19.79■□□□□ 0.76
TIMP1-201ENST00000218388 HFM1A2PYH4 1435 aa19.78■□□□□ 0.76
TIMP1-201ENST00000218388 ERBINQ96RT1 1412 aa19.78■□□□□ 0.76
TIMP1-201ENST00000218388 EIF2AK4Q9P2K8 1649 aaKnown RBP19.77■□□□□ 0.76
TIMP1-201ENST00000218388 AGLP35573 1532 aa19.76■□□□□ 0.75
TIMP1-201ENST00000218388 ANKRD50Q9ULJ7 1429 aa19.76■□□□□ 0.75
TIMP1-201ENST00000218388 NAIPQ13075 1403 aa19.75■□□□□ 0.75
TIMP1-201ENST00000218388 BCORL1Q5H9F3 1711 aa19.73■□□□□ 0.75
TIMP1-201ENST00000218388 ARID4BQ4LE39 1312 aaPredicted RBP19.73■□□□□ 0.75
TIMP1-201ENST00000218388 SETD5Q9C0A6 1442 aa19.7■□□□□ 0.74
TIMP1-201ENST00000218388 SIGLEC1Q9BZZ2 1709 aa19.7■□□□□ 0.74
TIMP1-201ENST00000218388 KIF3BO15066 747 aa19.69■□□□□ 0.74
TIMP1-201ENST00000218388 ACIN1Q9UKV3 1341 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms