RNA–Protein interactions for RNA: ENST00000217398.3

PXMP4-201, Transcript of peroxisomal membrane protein 4, humanhuman

TSL 2 BASIC

Gene PXMP4, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP4-201ENST00000217398 POGZQ7Z3K3 1410 aa30.01■■■□□ 2.39
PXMP4-201ENST00000217398 SCAPERQ9BY12 1400 aa30.01■■■□□ 2.39
PXMP4-201ENST00000217398 PCF11O94913 1555 aaKnown RBP29.99■■■□□ 2.39
PXMP4-201ENST00000217398 CDK11AQ9UQ88 783 aaPredicted RBP29.98■■■□□ 2.39
PXMP4-201ENST00000217398 CASKIN1Q8WXD9 1431 aa29.97■■■□□ 2.39
PXMP4-201ENST00000217398 ARID4BQ4LE39 1312 aaPredicted RBP29.96■■■□□ 2.39
PXMP4-201ENST00000217398 RIMS1Q86UR5 1692 aaKnown RBP29.95■■■□□ 2.38
PXMP4-201ENST00000217398 EFCAB2Q5VUJ9 269 aa29.93■■■□□ 2.38
PXMP4-201ENST00000217398 CDC42BPBQ9Y5S2 1711 aa29.93■■■□□ 2.38
PXMP4-201ENST00000217398 CLIP1P30622 1438 aa29.9■■■□□ 2.38
PXMP4-201ENST00000217398 CCDC18Q5T9S5 1454 aa29.9■■■□□ 2.38
PXMP4-201ENST00000217398 KDM5CP41229 1560 aa29.88■■■□□ 2.37
PXMP4-201ENST00000217398 ARHGAP5Q13017 1502 aa29.87■■■□□ 2.37
PXMP4-201ENST00000217398 PREX2Q70Z35 1606 aa29.86■■■□□ 2.37
PXMP4-201ENST00000217398 ILDR1Q86SU0 546 aaPredicted RBP29.86■■■□□ 2.37
PXMP4-201ENST00000217398 ATP10AO60312 1499 aa29.84■■■□□ 2.37
PXMP4-201ENST00000217398 FYCO1Q9BQS8 1478 aa29.84■■■□□ 2.37
PXMP4-201ENST00000217398 ZNF518AQ6AHZ1 1483 aa29.83■■■□□ 2.37
PXMP4-201ENST00000217398 LMTK3Q96Q04 1460 aa29.83■■■□□ 2.37
PXMP4-201ENST00000217398 FER1L4A9Z1Z3 1794 aa29.81■■■□□ 2.36
PXMP4-201ENST00000217398 CDC42BPAQ5VT25 1732 aa29.81■■■□□ 2.36
PXMP4-201ENST00000217398 C9orf84Q5VXU9 1444 aa29.8■■■□□ 2.36
PXMP4-201ENST00000217398 ARHGEF12Q9NZN5 1544 aa29.79■■■□□ 2.36
PXMP4-201ENST00000217398 ABCC1P33527 1531 aa29.77■■■□□ 2.36
PXMP4-201ENST00000217398 AFAP1Q8N556 730 aa29.77■■■□□ 2.36
PXMP4-201ENST00000217398 DIP2CQ9Y2E4 1556 aa29.76■■■□□ 2.35
PXMP4-201ENST00000217398 ITSN2Q9NZM3 1697 aa29.75■■■□□ 2.35
PXMP4-201ENST00000217398 REREQ9P2R6 1566 aa29.73■■■□□ 2.35
PXMP4-201ENST00000217398 MLH3Q9UHC1 1453 aa29.73■■■□□ 2.35
PXMP4-201ENST00000217398 ABCA6Q8N139 1617 aa29.72■■■□□ 2.35
PXMP4-201ENST00000217398 TRAPPC8Q9Y2L5 1435 aa29.71■■■□□ 2.35
PXMP4-201ENST00000217398 MLECQ14165 292 aa29.71■■■□□ 2.35
PXMP4-201ENST00000217398 KIDINS220Q9ULH0 1771 aa29.66■■■□□ 2.34
PXMP4-201ENST00000217398 GPATCH8Q9UKJ3 1502 aaKnown RBP29.65■■■□□ 2.34
PXMP4-201ENST00000217398 SAMD9LQ8IVG5 1584 aa29.64■■■□□ 2.34
PXMP4-201ENST00000217398 AGLP35573 1532 aa29.61■■■□□ 2.33
PXMP4-201ENST00000217398 PLPPR3Q6T4P5 718 aa29.58■■■□□ 2.33
PXMP4-201ENST00000217398 HSPA2P54652 639 aa29.57■■■□□ 2.32
PXMP4-201ENST00000217398 PREX1Q8TCU6 1659 aa29.55■■■□□ 2.32
PXMP4-201ENST00000217398 SYCP2Q9BX26 1530 aa29.55■■■□□ 2.32
PXMP4-201ENST00000217398 CEBPAP49715 358 aaPredicted RBP29.52■■■□□ 2.32
PXMP4-201ENST00000217398 MYT1LQ9UL68 1186 aa29.5■■■□□ 2.31
PXMP4-201ENST00000217398 C3P01024 1663 aa29.5■■■□□ 2.31
PXMP4-201ENST00000217398 CEP162Q5TB80 1403 aa29.49■■■□□ 2.31
PXMP4-201ENST00000217398 KIAA1107Q9UPP5 1409 aa29.49■■■□□ 2.31
PXMP4-201ENST00000217398 SETD1BQ9UPS6 1966 aaKnown RBP29.49■■■□□ 2.31
PXMP4-201ENST00000217398 TIAM1Q13009 1591 aa29.47■■■□□ 2.31
PXMP4-201ENST00000217398 ZNF777Q9ULD5 760 aaPredicted RBP29.46■■■□□ 2.31
PXMP4-201ENST00000217398 MTUS2Q5JR59 1369 aa29.46■■■□□ 2.31
PXMP4-201ENST00000217398 INO80Q9ULG1 1556 aaPredicted RBP29.46■■■□□ 2.31
PXMP4-201ENST00000217398 HNRNPMP52272 730 aaKnown RBP eCLIP29.45■■■□□ 2.31
PXMP4-201ENST00000217398 EHBP1L1Q8N3D4 1523 aa29.45■■■□□ 2.3
PXMP4-201ENST00000217398 PLEKHH2Q8IVE3 1493 aa29.44■■■□□ 2.3
PXMP4-201ENST00000217398 CCNB3Q8WWL7 1395 aa29.44■■■□□ 2.3
PXMP4-201ENST00000217398 FBXO41Q8TF61 875 aa29.43■■■□□ 2.3
PXMP4-201ENST00000217398 ATP7AQ04656 1500 aa29.42■■■□□ 2.3
PXMP4-201ENST00000217398 CFDP1Q9UEE9 299 aaPredicted RBP29.42■■■□□ 2.3
PXMP4-201ENST00000217398 PLXNC1O60486 1568 aa29.41■■■□□ 2.3
PXMP4-201ENST00000217398 STRCQ7RTU9 1775 aa29.4■■■□□ 2.3
PXMP4-201ENST00000217398 SPAG9O60271 1321 aaKnown RBP29.4■■■□□ 2.3
PXMP4-201ENST00000217398 SUPT6HQ7KZ85 1726 aaKnown RBP29.38■■■□□ 2.29
PXMP4-201ENST00000217398 MBD5Q9P267 1494 aa29.36■■■□□ 2.29
PXMP4-201ENST00000217398 MROH2AA6NES4 1674 aa29.36■■■□□ 2.29
PXMP4-201ENST00000217398 UHRF1BP1Q6BDS2 1440 aa29.35■■■□□ 2.29
PXMP4-201ENST00000217398 ZNF644Q9H582 1327 aaPredicted RBP29.34■■■□□ 2.29
PXMP4-201ENST00000217398 CNTLNQ9NXG0 1405 aa29.34■■■□□ 2.29
PXMP4-201ENST00000217398 A2MP01023 1474 aa29.31■■■□□ 2.28
PXMP4-201ENST00000217398 ADGBQ8N7X0 1667 aa29.29■■■□□ 2.28
PXMP4-201ENST00000217398 NCOA2Q15596 1464 aa29.27■■■□□ 2.28
PXMP4-201ENST00000217398 CLTCQ00610 1675 aaKnown RBP29.25■■■□□ 2.27
PXMP4-201ENST00000217398 ESF1Q9H501 851 aaKnown RBP29.24■■■□□ 2.27
PXMP4-201ENST00000217398 RTEL1-TNFRSF6BF6WH68 1400 aa29.23■■■□□ 2.27
PXMP4-201ENST00000217398 NPATQ14207 1427 aa29.23■■■□□ 2.27
PXMP4-201ENST00000217398 ZMYM3Q14202 1370 aa29.22■■■□□ 2.27
PXMP4-201ENST00000217398 LOC105371045A0A1W2PR82 267 aa29.21■■■□□ 2.27
PXMP4-201ENST00000217398 VPS8Q8N3P4 1428 aa29.2■■■□□ 2.27
PXMP4-201ENST00000217398 CAMSAP2Q08AD1 1489 aa29.18■■■□□ 2.26
PXMP4-201ENST00000217398 CERKQ8TCT0 537 aa29.18■■■□□ 2.26
PXMP4-201ENST00000217398 PTPRTO14522 1441 aa29.16■■■□□ 2.26
PXMP4-201ENST00000217398 CCDC141Q6ZP82 1450 aa29.16■■■□□ 2.26
PXMP4-201ENST00000217398 LRRC9Q6ZRR7 1453 aa29.15■■■□□ 2.26
PXMP4-201ENST00000217398 DMRT2Q9Y5R5 561 aa29.14■■■□□ 2.26
PXMP4-201ENST00000217398 DHX29Q7Z478 1369 aaKnown RBP29.13■■■□□ 2.25
PXMP4-201ENST00000217398 PTPRKQ15262 1439 aa29.13■■■□□ 2.25
PXMP4-201ENST00000217398 NCOA1Q15788 1441 aa29.13■■■□□ 2.25
PXMP4-201ENST00000217398 ARHGEF5Q12774 1597 aa29.13■■■□□ 2.25
PXMP4-201ENST00000217398 ZNF142P52746 1687 aaPredicted RBP29.12■■■□□ 2.25
PXMP4-201ENST00000217398 MAP3K1Q13233 1512 aa29.11■■■□□ 2.25
PXMP4-201ENST00000217398 MYO3AQ8NEV4 1616 aa29.11■■■□□ 2.25
PXMP4-201ENST00000217398 GGT6Q6P531 493 aa29.1■■■□□ 2.25
PXMP4-201ENST00000217398 PPP6R1Q9UPN7 881 aa29.1■■■□□ 2.25
PXMP4-201ENST00000217398 CAMSAP1Q5T5Y3 1602 aa29.09■■■□□ 2.25
PXMP4-201ENST00000217398 RSPH4AQ5TD94 716 aa29.06■■■□□ 2.24
PXMP4-201ENST00000217398 LTBP4Q8N2S1 1624 aa29.04■■■□□ 2.24
PXMP4-201ENST00000217398 CEP170BQ9Y4F5 1589 aaPredicted RBP29.04■■■□□ 2.24
PXMP4-201ENST00000217398 KANK4Q5T7N3 995 aaPredicted RBP29.03■■■□□ 2.24
PXMP4-201ENST00000217398 FAM135AQ9P2D6 1515 aa29.01■■■□□ 2.23
PXMP4-201ENST00000217398 MAST1Q9Y2H9 1570 aa29.01■■■□□ 2.23
PXMP4-201ENST00000217398 PLA2R1Q13018 1463 aa28.98■■■□□ 2.23
PXMP4-201ENST00000217398 TCOF1Q13428 1488 aaKnown RBP28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms