RNA–Protein interactions for RNA: ENST00000216274.9

RIPK3-201, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK3, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-201ENST00000216274 KIF14Q15058 1648 aa18.89■□□□□ 0.61
RIPK3-201ENST00000216274 FAM50AQ14320 339 aaKnown RBP18.88■□□□□ 0.61
RIPK3-201ENST00000216274 SETD5Q9C0A6 1442 aa18.87■□□□□ 0.61
RIPK3-201ENST00000216274 TTC37Q6PGP7 1564 aa18.87■□□□□ 0.61
RIPK3-201ENST00000216274 SUPT6HQ7KZ85 1726 aaKnown RBP18.87■□□□□ 0.61
RIPK3-201ENST00000216274 FGD6Q6ZV73 1430 aa18.86■□□□□ 0.61
RIPK3-201ENST00000216274 NEO1Q92859 1461 aa18.85■□□□□ 0.61
RIPK3-201ENST00000216274 ZNF316A6NFI3 1004 aaPredicted RBP18.85■□□□□ 0.61
RIPK3-201ENST00000216274 RAB3GAP2Q9H2M9 1393 aa18.84■□□□□ 0.61
RIPK3-201ENST00000216274 ARAP3Q8WWN8 1544 aa18.84■□□□□ 0.61
RIPK3-201ENST00000216274 CFAP74Q9C0B2 1584 aa18.84■□□□□ 0.61
RIPK3-201ENST00000216274 NCOA2Q15596 1464 aa18.83■□□□□ 0.61
RIPK3-201ENST00000216274 MYO5CQ9NQX4 1742 aa18.81■□□□□ 0.6
RIPK3-201ENST00000216274 PLCH2O75038 1416 aa18.8■□□□□ 0.6
RIPK3-201ENST00000216274 MYOM3Q5VTT5 1437 aa18.8■□□□□ 0.6
RIPK3-201ENST00000216274 DIEXFQ68CQ4 756 aaKnown RBP18.8■□□□□ 0.6
RIPK3-201ENST00000216274 COL17A1Q9UMD9 1497 aaPredicted RBP18.8■□□□□ 0.6
RIPK3-201ENST00000216274 FANCAO15360 1455 aa18.78■□□□□ 0.6
RIPK3-201ENST00000216274 AKNAQ7Z591 1439 aa18.74■□□□□ 0.59
RIPK3-201ENST00000216274 PREX2Q70Z35 1606 aa18.73■□□□□ 0.59
RIPK3-201ENST00000216274 CDC42BPBQ9Y5S2 1711 aa18.72■□□□□ 0.59
RIPK3-201ENST00000216274 PTPN23Q9H3S7 1636 aa18.71■□□□□ 0.59
RIPK3-201ENST00000216274 EFCAB2Q5VUJ9 269 aa18.71■□□□□ 0.59
RIPK3-201ENST00000216274 CDC42BPAQ5VT25 1732 aa18.71■□□□□ 0.59
RIPK3-201ENST00000216274 TCOF1Q13428 1488 aaKnown RBP18.7■□□□□ 0.58
RIPK3-201ENST00000216274 ARHGAP5Q13017 1502 aa18.7■□□□□ 0.58
RIPK3-201ENST00000216274 DENND4BO75064 1496 aaPredicted RBP18.69■□□□□ 0.58
RIPK3-201ENST00000216274 RICTORQ6R327 1708 aa18.68■□□□□ 0.58
RIPK3-201ENST00000216274 ADGRL1O94910 1474 aa18.68■□□□□ 0.58
RIPK3-201ENST00000216274 MIA2Q96PC5 1412 aa18.67■□□□□ 0.58
RIPK3-201ENST00000216274 FRMPD1Q5SYB0 1578 aa18.67■□□□□ 0.58
RIPK3-201ENST00000216274 HFM1A2PYH4 1435 aa18.67■□□□□ 0.58
RIPK3-201ENST00000216274 GPATCH8Q9UKJ3 1502 aaKnown RBP18.66■□□□□ 0.58
RIPK3-201ENST00000216274 ITSN2Q9NZM3 1697 aa18.65■□□□□ 0.58
RIPK3-201ENST00000216274 ZMYM4Q5VZL5 1548 aa18.64■□□□□ 0.57
RIPK3-201ENST00000216274 SCAPERQ9BY12 1400 aa18.63■□□□□ 0.57
RIPK3-201ENST00000216274 POGZQ7Z3K3 1410 aa18.63■□□□□ 0.57
RIPK3-201ENST00000216274 PTPRKQ15262 1439 aa18.62■□□□□ 0.57
RIPK3-201ENST00000216274 RAPGEF3O95398 923 aa18.62■□□□□ 0.57
RIPK3-201ENST00000216274 ABCC1P33527 1531 aa18.62■□□□□ 0.57
RIPK3-201ENST00000216274 MAGI2Q86UL8 1455 aa18.6■□□□□ 0.57
RIPK3-201ENST00000216274 ZNF518AQ6AHZ1 1483 aa18.6■□□□□ 0.57
RIPK3-201ENST00000216274 PLEKHH2Q8IVE3 1493 aa18.59■□□□□ 0.57
RIPK3-201ENST00000216274 KDM5CP41229 1560 aa18.58■□□□□ 0.56
RIPK3-201ENST00000216274 NAIPQ13075 1403 aa18.58■□□□□ 0.56
RIPK3-201ENST00000216274 SAMD9LQ8IVG5 1584 aa18.58■□□□□ 0.56
RIPK3-201ENST00000216274 TIMELESSQ9UNS1 1208 aa18.58■□□□□ 0.56
RIPK3-201ENST00000216274 CFDP1Q9UEE9 299 aaPredicted RBP18.57■□□□□ 0.56
RIPK3-201ENST00000216274 ARHGEF40Q8TER5 1519 aa18.57■□□□□ 0.56
RIPK3-201ENST00000216274 KIAA1107Q9UPP5 1409 aa18.57■□□□□ 0.56
RIPK3-201ENST00000216274 GCC2Q8IWJ2 1684 aa18.55■□□□□ 0.56
RIPK3-201ENST00000216274 ZFYVE16Q7Z3T8 1539 aa18.53■□□□□ 0.56
RIPK3-201ENST00000216274 ARHGEF12Q9NZN5 1544 aa18.53■□□□□ 0.56
RIPK3-201ENST00000216274 SYCP2Q9BX26 1530 aa18.52■□□□□ 0.55
RIPK3-201ENST00000216274 MLH3Q9UHC1 1453 aa18.51■□□□□ 0.55
RIPK3-201ENST00000216274 HECW2Q9P2P5 1572 aa18.51■□□□□ 0.55
RIPK3-201ENST00000216274 ACIN1Q9UKV3 1341 aaKnown RBP18.51■□□□□ 0.55
RIPK3-201ENST00000216274 TRAPPC8Q9Y2L5 1435 aa18.5■□□□□ 0.55
RIPK3-201ENST00000216274 ZNF777Q9ULD5 760 aaPredicted RBP18.5■□□□□ 0.55
RIPK3-201ENST00000216274 DNMT1P26358 1616 aaKnown RBP18.47■□□□□ 0.55
RIPK3-201ENST00000216274 AFAP1Q8N556 730 aa18.47■□□□□ 0.55
RIPK3-201ENST00000216274 YEATS2Q9ULM3 1422 aa18.47■□□□□ 0.55
RIPK3-201ENST00000216274 ROCK1Q13464 1354 aa18.47■□□□□ 0.55
RIPK3-201ENST00000216274 CAMSAP2Q08AD1 1489 aa18.46■□□□□ 0.55
RIPK3-201ENST00000216274 DAPK1P53355 1430 aa18.46■□□□□ 0.55
RIPK3-201ENST00000216274 SIN3AQ96ST3 1273 aa18.46■□□□□ 0.55
RIPK3-201ENST00000216274 MBD5Q9P267 1494 aa18.46■□□□□ 0.55
RIPK3-201ENST00000216274 NEUROD1Q13562 356 aa18.45■□□□□ 0.54
RIPK3-201ENST00000216274 ATP10AO60312 1499 aa18.45■□□□□ 0.54
RIPK3-201ENST00000216274 REREQ9P2R6 1566 aa18.44■□□□□ 0.54
RIPK3-201ENST00000216274 RSPH4AQ5TD94 716 aa18.44■□□□□ 0.54
RIPK3-201ENST00000216274 RRP7BPQ9NSQ0 103 aa18.44■□□□□ 0.54
RIPK3-201ENST00000216274 C9orf84Q5VXU9 1444 aa18.44■□□□□ 0.54
RIPK3-201ENST00000216274 KIDINS220Q9ULH0 1771 aa18.44■□□□□ 0.54
RIPK3-201ENST00000216274 ARHGEF5Q12774 1597 aa18.43■□□□□ 0.54
RIPK3-201ENST00000216274 HNRNPMP52272 730 aaKnown RBP eCLIP18.43■□□□□ 0.54
RIPK3-201ENST00000216274 CHIC2Q9UKJ5 165 aa18.43■□□□□ 0.54
RIPK3-201ENST00000216274 ZNF644Q9H582 1327 aaPredicted RBP18.43■□□□□ 0.54
RIPK3-201ENST00000216274 INO80Q9ULG1 1556 aaPredicted RBP18.42■□□□□ 0.54
RIPK3-201ENST00000216274 DIP2CQ9Y2E4 1556 aa18.42■□□□□ 0.54
RIPK3-201ENST00000216274 CENPBP07199 599 aaPredicted RBP18.42■□□□□ 0.54
RIPK3-201ENST00000216274 ABCC5O15440 1437 aa18.42■□□□□ 0.54
RIPK3-201ENST00000216274 CCDC141Q6ZP82 1450 aa18.41■□□□□ 0.54
RIPK3-201ENST00000216274 ABCA6Q8N139 1617 aa18.41■□□□□ 0.54
RIPK3-201ENST00000216274 KDM4FA0A1W2PPD8 638 aa18.41■□□□□ 0.54
RIPK3-201ENST00000216274 ATP7AQ04656 1500 aa18.4■□□□□ 0.54
RIPK3-201ENST00000216274 RTEL1-TNFRSF6BF6WH68 1400 aa18.4■□□□□ 0.54
RIPK3-201ENST00000216274 SPAG9O60271 1321 aaKnown RBP18.4■□□□□ 0.54
RIPK3-201ENST00000216274 BCORL1Q5H9F3 1711 aa18.39■□□□□ 0.53
RIPK3-201ENST00000216274 TONSLQ96HA7 1378 aa18.39■□□□□ 0.53
RIPK3-201ENST00000216274 MIER1Q8N108 512 aa18.39■□□□□ 0.53
RIPK3-201ENST00000216274 ADAMTSL3P82987 1691 aa18.37■□□□□ 0.53
RIPK3-201ENST00000216274 SIGLEC1Q9BZZ2 1709 aa18.37■□□□□ 0.53
RIPK3-201ENST00000216274 PPP1R15AO75807 674 aaPredicted RBP18.37■□□□□ 0.53
RIPK3-201ENST00000216274 MYT1LQ9UL68 1186 aa18.37■□□□□ 0.53
RIPK3-201ENST00000216274 AGLP35573 1532 aa18.36■□□□□ 0.53
RIPK3-201ENST00000216274 TRIM52Q96A61 297 aa18.35■□□□□ 0.53
RIPK3-201ENST00000216274 ADGBQ8N7X0 1667 aa18.35■□□□□ 0.53
RIPK3-201ENST00000216274 ARID4BQ4LE39 1312 aaPredicted RBP18.35■□□□□ 0.53
RIPK3-201ENST00000216274 MAST1Q9Y2H9 1570 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms