RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 ATP1B4Q9UN42 357 aaPredicted RBP32.55■■■□□ 2.8
SYNGR1-201ENST00000216155 MAGI2Q86UL8 1455 aa32.54■■■□□ 2.8
SYNGR1-201ENST00000216155 LRRIQ1Q96JM4 1722 aa32.53■■■□□ 2.8
SYNGR1-201ENST00000216155 SCAPERQ9BY12 1400 aa32.52■■■□□ 2.8
SYNGR1-201ENST00000216155 PCF11O94913 1555 aaKnown RBP32.5■■■□□ 2.79
SYNGR1-201ENST00000216155 TROQ12816 1431 aaPredicted RBP32.49■■■□□ 2.79
SYNGR1-201ENST00000216155 LMTK3Q96Q04 1460 aa32.48■■■□□ 2.79
SYNGR1-201ENST00000216155 CDK11AQ9UQ88 783 aaPredicted RBP32.47■■■□□ 2.79
SYNGR1-201ENST00000216155 EFCAB2Q5VUJ9 269 aa32.41■■■□□ 2.78
SYNGR1-201ENST00000216155 CLIP1P30622 1438 aa32.41■■■□□ 2.78
SYNGR1-201ENST00000216155 ARHGAP5Q13017 1502 aa32.39■■■□□ 2.78
SYNGR1-201ENST00000216155 FER1L4A9Z1Z3 1794 aa32.38■■■□□ 2.77
SYNGR1-201ENST00000216155 C9orf84Q5VXU9 1444 aa32.36■■■□□ 2.77
SYNGR1-201ENST00000216155 ZNF518AQ6AHZ1 1483 aa32.35■■■□□ 2.77
SYNGR1-201ENST00000216155 KDM5CP41229 1560 aa32.35■■■□□ 2.77
SYNGR1-201ENST00000216155 ATP10AO60312 1499 aa32.35■■■□□ 2.77
SYNGR1-201ENST00000216155 CASKIN1Q8WXD9 1431 aa32.34■■■□□ 2.77
SYNGR1-201ENST00000216155 CDC42BPBQ9Y5S2 1711 aa32.32■■■□□ 2.76
SYNGR1-201ENST00000216155 CCDC18Q5T9S5 1454 aa32.32■■■□□ 2.76
SYNGR1-201ENST00000216155 MLECQ14165 292 aa32.32■■■□□ 2.76
SYNGR1-201ENST00000216155 ARHGEF12Q9NZN5 1544 aa32.31■■■□□ 2.76
SYNGR1-201ENST00000216155 PREX2Q70Z35 1606 aa32.29■■■□□ 2.76
SYNGR1-201ENST00000216155 PLPPR3Q6T4P5 718 aa32.28■■■□□ 2.76
SYNGR1-201ENST00000216155 AFAP1Q8N556 730 aa32.24■■■□□ 2.75
SYNGR1-201ENST00000216155 ABCC1P33527 1531 aa32.24■■■□□ 2.75
SYNGR1-201ENST00000216155 DIP2CQ9Y2E4 1556 aa32.24■■■□□ 2.75
SYNGR1-201ENST00000216155 FYCO1Q9BQS8 1478 aa32.23■■■□□ 2.75
SYNGR1-201ENST00000216155 HSPA2P54652 639 aa32.21■■■□□ 2.75
SYNGR1-201ENST00000216155 ABCA6Q8N139 1617 aa32.2■■■□□ 2.75
SYNGR1-201ENST00000216155 ITSN2Q9NZM3 1697 aa32.19■■■□□ 2.74
SYNGR1-201ENST00000216155 REREQ9P2R6 1566 aa32.19■■■□□ 2.74
SYNGR1-201ENST00000216155 CDC42BPAQ5VT25 1732 aa32.18■■■□□ 2.74
SYNGR1-201ENST00000216155 MLH3Q9UHC1 1453 aa32.17■■■□□ 2.74
SYNGR1-201ENST00000216155 FBXO41Q8TF61 875 aa32.17■■■□□ 2.74
SYNGR1-201ENST00000216155 TRAPPC8Q9Y2L5 1435 aa32.16■■■□□ 2.74
SYNGR1-201ENST00000216155 PREX1Q8TCU6 1659 aa32.12■■■□□ 2.73
SYNGR1-201ENST00000216155 MYT1LQ9UL68 1186 aa32.1■■■□□ 2.73
SYNGR1-201ENST00000216155 KIDINS220Q9ULH0 1771 aa32.07■■■□□ 2.72
SYNGR1-201ENST00000216155 AGLP35573 1532 aa32.06■■■□□ 2.72
SYNGR1-201ENST00000216155 CEBPAP49715 358 aaPredicted RBP32.06■■■□□ 2.72
SYNGR1-201ENST00000216155 SAMD9LQ8IVG5 1584 aa32.05■■■□□ 2.72
SYNGR1-201ENST00000216155 GPATCH8Q9UKJ3 1502 aaKnown RBP32.01■■■□□ 2.72
SYNGR1-201ENST00000216155 SYCP2Q9BX26 1530 aa32■■■□□ 2.71
SYNGR1-201ENST00000216155 C3P01024 1663 aa31.99■■■□□ 2.71
SYNGR1-201ENST00000216155 UHRF1BP1Q6BDS2 1440 aa31.95■■■□□ 2.71
SYNGR1-201ENST00000216155 ZNF777Q9ULD5 760 aaPredicted RBP31.94■■■□□ 2.7
SYNGR1-201ENST00000216155 SETD1BQ9UPS6 1966 aaKnown RBP31.91■■■□□ 2.7
SYNGR1-201ENST00000216155 STRCQ7RTU9 1775 aa31.91■■■□□ 2.7
SYNGR1-201ENST00000216155 KIAA1107Q9UPP5 1409 aa31.88■■■□□ 2.69
SYNGR1-201ENST00000216155 INO80Q9ULG1 1556 aaPredicted RBP31.87■■■□□ 2.69
SYNGR1-201ENST00000216155 ATP7AQ04656 1500 aa31.87■■■□□ 2.69
SYNGR1-201ENST00000216155 PLEKHH2Q8IVE3 1493 aa31.86■■■□□ 2.69
SYNGR1-201ENST00000216155 MTUS2Q5JR59 1369 aa31.86■■■□□ 2.69
SYNGR1-201ENST00000216155 CCNB3Q8WWL7 1395 aa31.86■■■□□ 2.69
SYNGR1-201ENST00000216155 CNTLNQ9NXG0 1405 aa31.85■■■□□ 2.69
SYNGR1-201ENST00000216155 SPAG9O60271 1321 aaKnown RBP31.85■■■□□ 2.69
SYNGR1-201ENST00000216155 HNRNPMP52272 730 aaKnown RBP eCLIP31.85■■■□□ 2.69
SYNGR1-201ENST00000216155 ESF1Q9H501 851 aaKnown RBP31.84■■■□□ 2.69
SYNGR1-201ENST00000216155 CFDP1Q9UEE9 299 aaPredicted RBP31.84■■■□□ 2.69
SYNGR1-201ENST00000216155 PLXNC1O60486 1568 aa31.83■■■□□ 2.69
SYNGR1-201ENST00000216155 TIAM1Q13009 1591 aa31.83■■■□□ 2.69
SYNGR1-201ENST00000216155 EHBP1L1Q8N3D4 1523 aa31.82■■■□□ 2.68
SYNGR1-201ENST00000216155 CERKQ8TCT0 537 aa31.82■■■□□ 2.68
SYNGR1-201ENST00000216155 SUPT6HQ7KZ85 1726 aaKnown RBP31.82■■■□□ 2.68
SYNGR1-201ENST00000216155 MROH2AA6NES4 1674 aa31.82■■■□□ 2.68
SYNGR1-201ENST00000216155 CEP162Q5TB80 1403 aa31.77■■■□□ 2.68
SYNGR1-201ENST00000216155 A2MP01023 1474 aa31.76■■■□□ 2.67
SYNGR1-201ENST00000216155 DMRT2Q9Y5R5 561 aa31.73■■■□□ 2.67
SYNGR1-201ENST00000216155 NPATQ14207 1427 aa31.72■■■□□ 2.67
SYNGR1-201ENST00000216155 CLTCQ00610 1675 aaKnown RBP31.71■■■□□ 2.67
SYNGR1-201ENST00000216155 MBD5Q9P267 1494 aa31.7■■■□□ 2.66
SYNGR1-201ENST00000216155 ZNF644Q9H582 1327 aaPredicted RBP31.7■■■□□ 2.66
SYNGR1-201ENST00000216155 ADGBQ8N7X0 1667 aa31.7■■■□□ 2.66
SYNGR1-201ENST00000216155 ZMYM3Q14202 1370 aa31.69■■■□□ 2.66
SYNGR1-201ENST00000216155 PTPRTO14522 1441 aa31.69■■■□□ 2.66
SYNGR1-201ENST00000216155 NCOA1Q15788 1441 aa31.67■■■□□ 2.66
SYNGR1-201ENST00000216155 MYO3AQ8NEV4 1616 aa31.62■■■□□ 2.65
SYNGR1-201ENST00000216155 CAMSAP1Q5T5Y3 1602 aa31.61■■■□□ 2.65
SYNGR1-201ENST00000216155 ZNF142P52746 1687 aaPredicted RBP31.6■■■□□ 2.65
SYNGR1-201ENST00000216155 NCOA2Q15596 1464 aa31.59■■■□□ 2.65
SYNGR1-201ENST00000216155 RTEL1-TNFRSF6BF6WH68 1400 aa31.59■■■□□ 2.65
SYNGR1-201ENST00000216155 PTPRKQ15262 1439 aa31.58■■■□□ 2.65
SYNGR1-201ENST00000216155 GGT6Q6P531 493 aa31.58■■■□□ 2.65
SYNGR1-201ENST00000216155 CAMSAP2Q08AD1 1489 aa31.56■■■□□ 2.64
SYNGR1-201ENST00000216155 LTBP4Q8N2S1 1624 aa31.56■■■□□ 2.64
SYNGR1-201ENST00000216155 CCDC141Q6ZP82 1450 aa31.55■■■□□ 2.64
SYNGR1-201ENST00000216155 CEP170BQ9Y4F5 1589 aaPredicted RBP31.53■■■□□ 2.64
SYNGR1-201ENST00000216155 PPP6R1Q9UPN7 881 aa31.5■■■□□ 2.63
SYNGR1-201ENST00000216155 DHX29Q7Z478 1369 aaKnown RBP31.5■■■□□ 2.63
SYNGR1-201ENST00000216155 PLA2R1Q13018 1463 aa31.48■■■□□ 2.63
SYNGR1-201ENST00000216155 VPS8Q8N3P4 1428 aa31.45■■■□□ 2.63
SYNGR1-201ENST00000216155 ARHGEF5Q12774 1597 aa31.44■■■□□ 2.62
SYNGR1-201ENST00000216155 TCOF1Q13428 1488 aaKnown RBP31.43■■■□□ 2.62
SYNGR1-201ENST00000216155 NCKAP5LQ9HCH0 1330 aa31.43■■■□□ 2.62
SYNGR1-201ENST00000216155 IQSEC2Q5JU85 1478 aa31.42■■■□□ 2.62
SYNGR1-201ENST00000216155 KDM5DQ9BY66 1539 aa31.42■■■□□ 2.62
SYNGR1-201ENST00000216155 LRRC9Q6ZRR7 1453 aa31.41■■■□□ 2.62
SYNGR1-201ENST00000216155 FAM135AQ9P2D6 1515 aa31.41■■■□□ 2.62
SYNGR1-201ENST00000216155 RSPH4AQ5TD94 716 aa31.39■■■□□ 2.62
SYNGR1-201ENST00000216155 KIF3BO15066 747 aa31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms