RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 FANCAO15360 1455 aa31.24■■■□□ 2.59
RHBDD3-201ENST00000216085 NEO1Q92859 1461 aa31.23■■■□□ 2.59
RHBDD3-201ENST00000216085 EFCAB2Q5VUJ9 269 aa31.22■■■□□ 2.59
RHBDD3-201ENST00000216085 PHLDB1Q86UU1 1377 aa31.22■■■□□ 2.59
RHBDD3-201ENST00000216085 CFDP1Q9UEE9 299 aaPredicted RBP31.2■■■□□ 2.59
RHBDD3-201ENST00000216085 CDC42BPBQ9Y5S2 1711 aa31.19■■■□□ 2.58
RHBDD3-201ENST00000216085 PPARGC1BQ86YN6 1023 aaKnown RBP31.17■■■□□ 2.58
RHBDD3-201ENST00000216085 MYOM3Q5VTT5 1437 aa31.17■■■□□ 2.58
RHBDD3-201ENST00000216085 AKNAQ7Z591 1439 aa31.13■■■□□ 2.57
RHBDD3-201ENST00000216085 MIA2Q96PC5 1412 aa31.11■■■□□ 2.57
RHBDD3-201ENST00000216085 ZNF777Q9ULD5 760 aaPredicted RBP31.11■■■□□ 2.57
RHBDD3-201ENST00000216085 ADGRL1O94910 1474 aa31.1■■■□□ 2.57
RHBDD3-201ENST00000216085 PLEKHH2Q8IVE3 1493 aa31.08■■■□□ 2.57
RHBDD3-201ENST00000216085 KDM6BO15054 1643 aa31.05■■■□□ 2.56
RHBDD3-201ENST00000216085 SAMD9LQ8IVG5 1584 aa31.04■■■□□ 2.56
RHBDD3-201ENST00000216085 FGD6Q6ZV73 1430 aa31.04■■■□□ 2.56
RHBDD3-201ENST00000216085 ABCC1P33527 1531 aa31.02■■■□□ 2.56
RHBDD3-201ENST00000216085 SCAPERQ9BY12 1400 aa31.02■■■□□ 2.56
RHBDD3-201ENST00000216085 DENND4BO75064 1496 aaPredicted RBP31.01■■■□□ 2.55
RHBDD3-201ENST00000216085 CAMSAP2Q08AD1 1489 aa31.01■■■□□ 2.55
RHBDD3-201ENST00000216085 KIAA1107Q9UPP5 1409 aa31■■■□□ 2.55
RHBDD3-201ENST00000216085 PTPN23Q9H3S7 1636 aa30.98■■■□□ 2.55
RHBDD3-201ENST00000216085 SYCP2Q9BX26 1530 aa30.96■■■□□ 2.55
RHBDD3-201ENST00000216085 ZNF644Q9H582 1327 aaPredicted RBP30.95■■■□□ 2.54
RHBDD3-201ENST00000216085 POGZQ7Z3K3 1410 aa30.94■■■□□ 2.54
RHBDD3-201ENST00000216085 ZNF518AQ6AHZ1 1483 aa30.93■■■□□ 2.54
RHBDD3-201ENST00000216085 TCOF1Q13428 1488 aaKnown RBP30.92■■■□□ 2.54
RHBDD3-201ENST00000216085 COL17A1Q9UMD9 1497 aaPredicted RBP30.92■■■□□ 2.54
RHBDD3-201ENST00000216085 RSPH4AQ5TD94 716 aa30.89■■■□□ 2.54
RHBDD3-201ENST00000216085 ARHGEF12Q9NZN5 1544 aa30.89■■■□□ 2.54
RHBDD3-201ENST00000216085 RAPGEF3O95398 923 aa30.89■■■□□ 2.54
RHBDD3-201ENST00000216085 HNRNPMP52272 730 aaKnown RBP eCLIP30.89■■■□□ 2.54
RHBDD3-201ENST00000216085 RICTORQ6R327 1708 aa30.88■■■□□ 2.53
RHBDD3-201ENST00000216085 FAM50AQ14320 339 aaKnown RBP30.87■■■□□ 2.53
RHBDD3-201ENST00000216085 ARHGEF5Q12774 1597 aa30.86■■■□□ 2.53
RHBDD3-201ENST00000216085 CCDC141Q6ZP82 1450 aa30.85■■■□□ 2.53
RHBDD3-201ENST00000216085 MBD5Q9P267 1494 aa30.85■■■□□ 2.53
RHBDD3-201ENST00000216085 TRAPPC8Q9Y2L5 1435 aa30.85■■■□□ 2.53
RHBDD3-201ENST00000216085 FRMPD1Q5SYB0 1578 aa30.85■■■□□ 2.53
RHBDD3-201ENST00000216085 RRBP1Q9P2E9 1410 aaKnown RBP30.84■■■□□ 2.53
RHBDD3-201ENST00000216085 KDM5CP41229 1560 aa30.82■■■□□ 2.53
RHBDD3-201ENST00000216085 ZMYM4Q5VZL5 1548 aa30.82■■■□□ 2.52
RHBDD3-201ENST00000216085 AFAP1Q8N556 730 aa30.82■■■□□ 2.52
RHBDD3-201ENST00000216085 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.81■■■□□ 2.52
RHBDD3-201ENST00000216085 MYT1LQ9UL68 1186 aa30.79■■■□□ 2.52
RHBDD3-201ENST00000216085 MAGI2Q86UL8 1455 aa30.78■■■□□ 2.52
RHBDD3-201ENST00000216085 TSPY4P0CV99 314 aa30.78■■■□□ 2.52
RHBDD3-201ENST00000216085 TSPY10P0CW01 314 aa30.78■■■□□ 2.52
RHBDD3-201ENST00000216085 SPAG9O60271 1321 aaKnown RBP30.77■■■□□ 2.52
RHBDD3-201ENST00000216085 HECW2Q9P2P5 1572 aa30.77■■■□□ 2.52
RHBDD3-201ENST00000216085 DNMT1P26358 1616 aaKnown RBP30.76■■■□□ 2.51
RHBDD3-201ENST00000216085 MLH3Q9UHC1 1453 aa30.75■■■□□ 2.51
RHBDD3-201ENST00000216085 DAPK1P53355 1430 aa30.73■■■□□ 2.51
RHBDD3-201ENST00000216085 ZFYVE16Q7Z3T8 1539 aa30.72■■■□□ 2.51
RHBDD3-201ENST00000216085 SHANK2Q9UPX8 1470 aa30.72■■■□□ 2.51
RHBDD3-201ENST00000216085 ABCC5O15440 1437 aa30.7■■■□□ 2.51
RHBDD3-201ENST00000216085 CROCC2H7BZ55 1655 aa30.7■■■□□ 2.51
RHBDD3-201ENST00000216085 ATP7AQ04656 1500 aa30.7■■■□□ 2.51
RHBDD3-201ENST00000216085 RTEL1-TNFRSF6BF6WH68 1400 aa30.7■■■□□ 2.5
RHBDD3-201ENST00000216085 C9orf84Q5VXU9 1444 aa30.69■■■□□ 2.5
RHBDD3-201ENST00000216085 INO80Q9ULG1 1556 aaPredicted RBP30.69■■■□□ 2.5
RHBDD3-201ENST00000216085 ARHGEF40Q8TER5 1519 aa30.68■■■□□ 2.5
RHBDD3-201ENST00000216085 MAST1Q9Y2H9 1570 aa30.67■■■□□ 2.5
RHBDD3-201ENST00000216085 KIDINS220Q9ULH0 1771 aa30.64■■■□□ 2.5
RHBDD3-201ENST00000216085 YEATS2Q9ULM3 1422 aa30.62■■■□□ 2.49
RHBDD3-201ENST00000216085 ITGAEP38570 1179 aa30.61■■■□□ 2.49
RHBDD3-201ENST00000216085 ABCA6Q8N139 1617 aa30.59■■■□□ 2.49
RHBDD3-201ENST00000216085 DIP2CQ9Y2E4 1556 aa30.59■■■□□ 2.49
RHBDD3-201ENST00000216085 ATP10AO60312 1499 aa30.58■■■□□ 2.49
RHBDD3-201ENST00000216085 ANKRD30AQ9BXX3 1397 aa30.57■■■□□ 2.48
RHBDD3-201ENST00000216085 PLXNC1O60486 1568 aa30.57■■■□□ 2.48
RHBDD3-201ENST00000216085 ADGBQ8N7X0 1667 aa30.56■■■□□ 2.48
RHBDD3-201ENST00000216085 CHIC2Q9UKJ5 165 aa30.56■■■□□ 2.48
RHBDD3-201ENST00000216085 ADGRL2O95490 1459 aa30.54■■■□□ 2.48
RHBDD3-201ENST00000216085 REREQ9P2R6 1566 aa30.52■■■□□ 2.48
RHBDD3-201ENST00000216085 PTPRKQ15262 1439 aa30.51■■■□□ 2.47
RHBDD3-201ENST00000216085 ROCK1Q13464 1354 aa30.51■■■□□ 2.47
RHBDD3-201ENST00000216085 KIF15Q9NS87 1388 aa30.5■■■□□ 2.47
RHBDD3-201ENST00000216085 A2MP01023 1474 aa30.5■■■□□ 2.47
RHBDD3-201ENST00000216085 NCOA1Q15788 1441 aa30.49■■■□□ 2.47
RHBDD3-201ENST00000216085 RRP7BPQ9NSQ0 103 aa30.46■■■□□ 2.47
RHBDD3-201ENST00000216085 DUOX2Q9NRD8 1548 aa30.46■■■□□ 2.47
RHBDD3-201ENST00000216085 ARID4BQ4LE39 1312 aaPredicted RBP30.45■■■□□ 2.46
RHBDD3-201ENST00000216085 DHX29Q7Z478 1369 aaKnown RBP30.45■■■□□ 2.46
RHBDD3-201ENST00000216085 AGLP35573 1532 aa30.41■■■□□ 2.46
RHBDD3-201ENST00000216085 ERBINQ96RT1 1412 aa30.4■■■□□ 2.46
RHBDD3-201ENST00000216085 TRIM26Q12899 539 aaPredicted RBP30.38■■■□□ 2.45
RHBDD3-201ENST00000216085 EIF2AK4Q9P2K8 1649 aaKnown RBP30.36■■■□□ 2.45
RHBDD3-201ENST00000216085 ANKRD50Q9ULJ7 1429 aa30.34■■■□□ 2.45
RHBDD3-201ENST00000216085 HFM1A2PYH4 1435 aa30.33■■■□□ 2.45
RHBDD3-201ENST00000216085 SIGLEC1Q9BZZ2 1709 aa30.31■■■□□ 2.44
RHBDD3-201ENST00000216085 KIF3BO15066 747 aa30.31■■■□□ 2.44
RHBDD3-201ENST00000216085 GCC2Q8IWJ2 1684 aa30.3■■■□□ 2.44
RHBDD3-201ENST00000216085 BCORL1Q5H9F3 1711 aa30.3■■■□□ 2.44
RHBDD3-201ENST00000216085 NAIPQ13075 1403 aa30.28■■■□□ 2.44
RHBDD3-201ENST00000216085 MLECQ14165 292 aa30.26■■■□□ 2.43
RHBDD3-201ENST00000216085 GGT6Q6P531 493 aa30.23■■■□□ 2.43
RHBDD3-201ENST00000216085 RNF17Q9BXT8 1623 aaKnown RBP30.22■■■□□ 2.43
RHBDD3-201ENST00000216085 ESF1Q9H501 851 aaKnown RBP30.21■■■□□ 2.43
RHBDD3-201ENST00000216085 PPP6R1Q9UPN7 881 aa30.2■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms