RNA–Protein interactions for RNA: ENST00000157812.6

PSMC4-201, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMC4, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-201ENST00000157812 PREX2Q70Z35 1606 aa19.56■□□□□ 0.72
PSMC4-201ENST00000157812 MYOM3Q5VTT5 1437 aa19.56■□□□□ 0.72
PSMC4-201ENST00000157812 SETD5Q9C0A6 1442 aa19.56■□□□□ 0.72
PSMC4-201ENST00000157812 CDC42BPBQ9Y5S2 1711 aa19.55■□□□□ 0.72
PSMC4-201ENST00000157812 MAP3K4Q9Y6R4 1608 aa19.53■□□□□ 0.72
PSMC4-201ENST00000157812 GPATCH8Q9UKJ3 1502 aaKnown RBP19.53■□□□□ 0.72
PSMC4-201ENST00000157812 RAB3GAP2Q9H2M9 1393 aa19.52■□□□□ 0.71
PSMC4-201ENST00000157812 FAM69CQ0P6D2 419 aa19.51■□□□□ 0.71
PSMC4-201ENST00000157812 TSPOAP1O95153 1857 aa19.51■□□□□ 0.71
PSMC4-201ENST00000157812 FGD6Q6ZV73 1430 aa19.51■□□□□ 0.71
PSMC4-201ENST00000157812 ARHGAP5Q13017 1502 aa19.5■□□□□ 0.71
PSMC4-201ENST00000157812 MIA2Q96PC5 1412 aa19.5■□□□□ 0.71
PSMC4-201ENST00000157812 CFDP1Q9UEE9 299 aaPredicted RBP19.49■□□□□ 0.71
PSMC4-201ENST00000157812 PTPN23Q9H3S7 1636 aa19.49■□□□□ 0.71
PSMC4-201ENST00000157812 ARAP3Q8WWN8 1544 aa19.49■□□□□ 0.71
PSMC4-201ENST00000157812 CD109Q6YHK3 1445 aa19.49■□□□□ 0.71
PSMC4-201ENST00000157812 PLCH2O75038 1416 aa19.48■□□□□ 0.71
PSMC4-201ENST00000157812 CFAP74Q9C0B2 1584 aa19.47■□□□□ 0.71
PSMC4-201ENST00000157812 FAM50AQ14320 339 aaKnown RBP19.44■□□□□ 0.7
PSMC4-201ENST00000157812 EFCAB2Q5VUJ9 269 aa19.43■□□□□ 0.7
PSMC4-201ENST00000157812 ZNF777Q9ULD5 760 aaPredicted RBP19.43■□□□□ 0.7
PSMC4-201ENST00000157812 FANCAO15360 1455 aa19.43■□□□□ 0.7
PSMC4-201ENST00000157812 TRHP20396 242 aaPredicted RBP19.42■□□□□ 0.7
PSMC4-201ENST00000157812 ITGAEP38570 1179 aa19.41■□□□□ 0.7
PSMC4-201ENST00000157812 CAMSAP2Q08AD1 1489 aa19.41■□□□□ 0.7
PSMC4-201ENST00000157812 TCOF1Q13428 1488 aaKnown RBP19.41■□□□□ 0.7
PSMC4-201ENST00000157812 SAMD9LQ8IVG5 1584 aa19.41■□□□□ 0.7
PSMC4-201ENST00000157812 PPRC1Q5VV67 1664 aaKnown RBP19.41■□□□□ 0.7
PSMC4-201ENST00000157812 TEX14Q8IWB6 1497 aa19.4■□□□□ 0.7
PSMC4-201ENST00000157812 TIMELESSQ9UNS1 1208 aa19.39■□□□□ 0.69
PSMC4-201ENST00000157812 PLEKHH2Q8IVE3 1493 aa19.38■□□□□ 0.69
PSMC4-201ENST00000157812 ZNF644Q9H582 1327 aaPredicted RBP19.37■□□□□ 0.69
PSMC4-201ENST00000157812 NEO1Q92859 1461 aa19.36■□□□□ 0.69
PSMC4-201ENST00000157812 HFM1A2PYH4 1435 aa19.36■□□□□ 0.69
PSMC4-201ENST00000157812 ABCC1P33527 1531 aa19.35■□□□□ 0.69
PSMC4-201ENST00000157812 CENPBP07199 599 aaPredicted RBP19.34■□□□□ 0.69
PSMC4-201ENST00000157812 AKNAQ7Z591 1439 aa19.34■□□□□ 0.69
PSMC4-201ENST00000157812 SYCP2Q9BX26 1530 aa19.34■□□□□ 0.69
PSMC4-201ENST00000157812 DNMT1P26358 1616 aaKnown RBP19.33■□□□□ 0.69
PSMC4-201ENST00000157812 ADGRL1O94910 1474 aa19.33■□□□□ 0.69
PSMC4-201ENST00000157812 KIAA1107Q9UPP5 1409 aa19.32■□□□□ 0.68
PSMC4-201ENST00000157812 CROCC2H7BZ55 1655 aa19.32■□□□□ 0.68
PSMC4-201ENST00000157812 ARHGEF5Q12774 1597 aa19.32■□□□□ 0.68
PSMC4-201ENST00000157812 ACIN1Q9UKV3 1341 aaKnown RBP19.31■□□□□ 0.68
PSMC4-201ENST00000157812 HNRNPMP52272 730 aaKnown RBP eCLIP19.29■□□□□ 0.68
PSMC4-201ENST00000157812 RSPH4AQ5TD94 716 aa19.28■□□□□ 0.68
PSMC4-201ENST00000157812 SCAPERQ9BY12 1400 aa19.28■□□□□ 0.68
PSMC4-201ENST00000157812 DAPK1P53355 1430 aa19.27■□□□□ 0.68
PSMC4-201ENST00000157812 CCDC141Q6ZP82 1450 aa19.27■□□□□ 0.68
PSMC4-201ENST00000157812 MBD5Q9P267 1494 aa19.27■□□□□ 0.68
PSMC4-201ENST00000157812 ARHGEF12Q9NZN5 1544 aa19.27■□□□□ 0.68
PSMC4-201ENST00000157812 ADGBQ8N7X0 1667 aa19.26■□□□□ 0.67
PSMC4-201ENST00000157812 GCC2Q8IWJ2 1684 aa19.25■□□□□ 0.67
PSMC4-201ENST00000157812 ABCC5O15440 1437 aa19.24■□□□□ 0.67
PSMC4-201ENST00000157812 NAIPQ13075 1403 aa19.24■□□□□ 0.67
PSMC4-201ENST00000157812 RICTORQ6R327 1708 aa19.24■□□□□ 0.67
PSMC4-201ENST00000157812 DENND4BO75064 1496 aaPredicted RBP19.24■□□□□ 0.67
PSMC4-201ENST00000157812 TSPY4P0CV99 314 aa19.23■□□□□ 0.67
PSMC4-201ENST00000157812 TSPY10P0CW01 314 aa19.23■□□□□ 0.67
PSMC4-201ENST00000157812 ZNF518AQ6AHZ1 1483 aa19.23■□□□□ 0.67
PSMC4-201ENST00000157812 SHANK2Q9UPX8 1470 aa19.22■□□□□ 0.67
PSMC4-201ENST00000157812 PTPRKQ15262 1439 aa19.22■□□□□ 0.67
PSMC4-201ENST00000157812 TRAPPC8Q9Y2L5 1435 aa19.22■□□□□ 0.67
PSMC4-201ENST00000157812 POGZQ7Z3K3 1410 aa19.21■□□□□ 0.67
PSMC4-201ENST00000157812 MAST1Q9Y2H9 1570 aa19.2■□□□□ 0.66
PSMC4-201ENST00000157812 C9orf84Q5VXU9 1444 aa19.19■□□□□ 0.66
PSMC4-201ENST00000157812 AFAP1Q8N556 730 aa19.19■□□□□ 0.66
PSMC4-201ENST00000157812 KDM5CP41229 1560 aa19.18■□□□□ 0.66
PSMC4-201ENST00000157812 CHIC2Q9UKJ5 165 aa19.18■□□□□ 0.66
PSMC4-201ENST00000157812 KDM6BO15054 1643 aa19.16■□□□□ 0.66
PSMC4-201ENST00000157812 SPAG9O60271 1321 aaKnown RBP19.16■□□□□ 0.66
PSMC4-201ENST00000157812 FRMPD1Q5SYB0 1578 aa19.16■□□□□ 0.66
PSMC4-201ENST00000157812 HECW2Q9P2P5 1572 aa19.16■□□□□ 0.66
PSMC4-201ENST00000157812 INO80Q9ULG1 1556 aaPredicted RBP19.16■□□□□ 0.66
PSMC4-201ENST00000157812 RAPGEF3O95398 923 aa19.15■□□□□ 0.66
PSMC4-201ENST00000157812 MYT1LQ9UL68 1186 aa19.15■□□□□ 0.66
PSMC4-201ENST00000157812 ATP7AQ04656 1500 aa19.15■□□□□ 0.66
PSMC4-201ENST00000157812 ADGRL2O95490 1459 aa19.15■□□□□ 0.66
PSMC4-201ENST00000157812 PLXNC1O60486 1568 aa19.14■□□□□ 0.65
PSMC4-201ENST00000157812 ROCK1Q13464 1354 aa19.14■□□□□ 0.65
PSMC4-201ENST00000157812 ANKRD30AQ9BXX3 1397 aa19.14■□□□□ 0.65
PSMC4-201ENST00000157812 ZFYVE16Q7Z3T8 1539 aa19.14■□□□□ 0.65
PSMC4-201ENST00000157812 MIER1Q8N108 512 aa19.14■□□□□ 0.65
PSMC4-201ENST00000157812 KIDINS220Q9ULH0 1771 aa19.14■□□□□ 0.65
PSMC4-201ENST00000157812 RTEL1-TNFRSF6BF6WH68 1400 aa19.14■□□□□ 0.65
PSMC4-201ENST00000157812 ZMYM4Q5VZL5 1548 aa19.13■□□□□ 0.65
PSMC4-201ENST00000157812 MLH3Q9UHC1 1453 aa19.12■□□□□ 0.65
PSMC4-201ENST00000157812 SCAF1Q9H7N4 1312 aaKnown RBP19.11■□□□□ 0.65
PSMC4-201ENST00000157812 NCOA1Q15788 1441 aa19.11■□□□□ 0.65
PSMC4-201ENST00000157812 COL17A1Q9UMD9 1497 aaPredicted RBP19.1■□□□□ 0.65
PSMC4-201ENST00000157812 NEUROD1Q13562 356 aa19.09■□□□□ 0.65
PSMC4-201ENST00000157812 RRP7BPQ9NSQ0 103 aa19.09■□□□□ 0.65
PSMC4-201ENST00000157812 MAGI2Q86UL8 1455 aa19.08■□□□□ 0.65
PSMC4-201ENST00000157812 ABCA6Q8N139 1617 aa19.07■□□□□ 0.64
PSMC4-201ENST00000157812 TONSLQ96HA7 1378 aa19.07■□□□□ 0.64
PSMC4-201ENST00000157812 KIF15Q9NS87 1388 aa19.07■□□□□ 0.64
PSMC4-201ENST00000157812 PPP1R15AO75807 674 aaPredicted RBP19.06■□□□□ 0.64
PSMC4-201ENST00000157812 SIN3AQ96ST3 1273 aa19.06■□□□□ 0.64
PSMC4-201ENST00000157812 DUOX2Q9NRD8 1548 aa19.05■□□□□ 0.64
PSMC4-201ENST00000157812 DIP2CQ9Y2E4 1556 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms