RNA–Protein interactions for RNA: ENSMUST00000210789.1

Prpf40a-208, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 3,773 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-208ENSMUST00000210789 Samd9lQ69Z37 1561 aa11.91□□□□□ -0.5
Prpf40a-208ENSMUST00000210789 Ift140E9PY46 1464 aa11.91□□□□□ -0.5
Prpf40a-208ENSMUST00000210789 SynmQ70IV5 1561 aa11.89□□□□□ -0.51
Prpf40a-208ENSMUST00000210789 Sart3Q9JLI8 962 aaKnown RBP11.89□□□□□ -0.51
Prpf40a-208ENSMUST00000210789 Tcerg1Q8CGF7 1100 aaKnown RBP11.87□□□□□ -0.51
Prpf40a-208ENSMUST00000210789 Disp1Q3TDN0 1521 aa11.86□□□□□ -0.51
Prpf40a-208ENSMUST00000210789 ArxO35085 564 aa11.86□□□□□ -0.51
Prpf40a-208ENSMUST00000210789 AqrQ8CFQ3 1481 aaKnown RBP11.85□□□□□ -0.51
Prpf40a-208ENSMUST00000210789 BlmO88700 1416 aa11.84□□□□□ -0.51
Prpf40a-208ENSMUST00000210789 Eif4g1Q6NZJ6 1600 aaKnown RBP11.84□□□□□ -0.51
Prpf40a-208ENSMUST00000210789 Grin2aP35436 1464 aa11.84□□□□□ -0.51
Prpf40a-208ENSMUST00000210789 Mrs2Q5NCE8 434 aa11.84□□□□□ -0.51
Prpf40a-208ENSMUST00000210789 Mroh3A0A1D5RM54 893 aa11.83□□□□□ -0.51
Prpf40a-208ENSMUST00000210789 Lrriq1Q0P5X1 1673 aa11.83□□□□□ -0.52
Prpf40a-208ENSMUST00000210789 Aebp1Q640N1 1128 aa11.83□□□□□ -0.52
Prpf40a-208ENSMUST00000210789 Fyco1Q8VDC1 1437 aa11.82□□□□□ -0.52
Prpf40a-208ENSMUST00000210789 DekQ7TNV0 380 aaKnown RBP11.82□□□□□ -0.52
Prpf40a-208ENSMUST00000210789 Plcd3Q8K2J0 785 aa11.82□□□□□ -0.52
Prpf40a-208ENSMUST00000210789 EprsQ8CGC7 1512 aaKnown RBP11.81□□□□□ -0.52
Prpf40a-208ENSMUST00000210789 Cc2d2bA0A286YDU8 1405 aa11.81□□□□□ -0.52
Prpf40a-208ENSMUST00000210789 Paxip1Q6NZQ4 1056 aa11.81□□□□□ -0.52
Prpf40a-208ENSMUST00000210789 Irf5P56477 497 aa11.8□□□□□ -0.52
Prpf40a-208ENSMUST00000210789 Trim26Q99PN3 545 aa11.8□□□□□ -0.52
Prpf40a-208ENSMUST00000210789 Polr1aO35134 1717 aaKnown RBP11.8□□□□□ -0.52
Prpf40a-208ENSMUST00000210789 Tshz2Q68FE9 1030 aa11.79□□□□□ -0.52
Prpf40a-208ENSMUST00000210789 Anp32bQ9EST5 272 aaKnown RBP11.79□□□□□ -0.52
Prpf40a-208ENSMUST00000210789 Pla2r1Q62028 1487 aa11.79□□□□□ -0.52
Prpf40a-208ENSMUST00000210789 Arap1Q4LDD4 1452 aa11.78□□□□□ -0.52
Prpf40a-208ENSMUST00000210789 Magi3Q9EQJ9 1476 aa11.78□□□□□ -0.52
Prpf40a-208ENSMUST00000210789 Dhx30Q99PU8 1217 aaKnown RBP11.77□□□□□ -0.52
Prpf40a-208ENSMUST00000210789 CadpsQ80TJ1 1355 aa11.77□□□□□ -0.52
Prpf40a-208ENSMUST00000210789 Cux1P53564 1515 aa11.77□□□□□ -0.52
Prpf40a-208ENSMUST00000210789 Fkbp15Q6P9Q6 1216 aaKnown RBP11.77□□□□□ -0.53
Prpf40a-208ENSMUST00000210789 CntlnA2AM05 1397 aa11.76□□□□□ -0.53
Prpf40a-208ENSMUST00000210789 Dusp27Q148W8 1138 aa11.76□□□□□ -0.53
Prpf40a-208ENSMUST00000210789 B4galnt3Q6L8S8 986 aa11.76□□□□□ -0.53
Prpf40a-208ENSMUST00000210789 Chmp4bQ9D8B3 224 aaKnown RBP11.76□□□□□ -0.53
Prpf40a-208ENSMUST00000210789 Nup160Q9Z0W3 1402 aaKnown RBP11.76□□□□□ -0.53
Prpf40a-208ENSMUST00000210789 Gm7298A0A0N4SVU1 1476 aa11.75□□□□□ -0.53
Prpf40a-208ENSMUST00000210789 Wwc2Q6NXJ0 1187 aa11.75□□□□□ -0.53
Prpf40a-208ENSMUST00000210789 Kif27Q7M6Z4 1394 aa11.74□□□□□ -0.53
Prpf40a-208ENSMUST00000210789 AknaQ80VW7 1404 aa11.74□□□□□ -0.53
Prpf40a-208ENSMUST00000210789 Fam50aQ9WV03 339 aaKnown RBP11.73□□□□□ -0.53
Prpf40a-208ENSMUST00000210789 Smg6P61406 1418 aaKnown RBP11.73□□□□□ -0.53
Prpf40a-208ENSMUST00000210789 Fam43aQ8BUP8 424 aa11.73□□□□□ -0.53
Prpf40a-208ENSMUST00000210789 Ankrd26Q811D2 1581 aa11.72□□□□□ -0.53
Prpf40a-208ENSMUST00000210789 Ythdc1E9Q5K9 736 aaKnown RBP11.72□□□□□ -0.53
Prpf40a-208ENSMUST00000210789 WrnO09053 1401 aa11.72□□□□□ -0.53
Prpf40a-208ENSMUST00000210789 Arhgef5E9Q7D5 1581 aa11.71□□□□□ -0.53
Prpf40a-208ENSMUST00000210789 Dbr1Q923B1 550 aa11.71□□□□□ -0.53
Prpf40a-208ENSMUST00000210789 TchhA0A0B4J1F9 1599 aa11.69□□□□□ -0.54
Prpf40a-208ENSMUST00000210789 Naip1Q9QWK5 1403 aa11.69□□□□□ -0.54
Prpf40a-208ENSMUST00000210789 Lmod3E9QA62 571 aa11.69□□□□□ -0.54
Prpf40a-208ENSMUST00000210789 Cers3Q1A3B0 383 aa11.69□□□□□ -0.54
Prpf40a-208ENSMUST00000210789 Ube2uB1AUC4 352 aa11.68□□□□□ -0.54
Prpf40a-208ENSMUST00000210789 Slc4a2P13808 1237 aaKnown RBP11.68□□□□□ -0.54
Prpf40a-208ENSMUST00000210789 Fgd6Q69ZL1 1399 aa11.68□□□□□ -0.54
Prpf40a-208ENSMUST00000210789 Nkx1-2P42580 305 aa11.67□□□□□ -0.54
Prpf40a-208ENSMUST00000210789 PxdnQ3UQ28 1475 aa11.67□□□□□ -0.54
Prpf40a-208ENSMUST00000210789 Pbrm1Q8BSQ9 1634 aaKnown RBP11.67□□□□□ -0.54
Prpf40a-208ENSMUST00000210789 Dnai1Q8C0M8 701 aa11.67□□□□□ -0.54
Prpf40a-208ENSMUST00000210789 WizO88286 1684 aaKnown RBP11.66□□□□□ -0.54
Prpf40a-208ENSMUST00000210789 Tnnt2P50752 301 aa11.66□□□□□ -0.54
Prpf40a-208ENSMUST00000210789 AcrbpQ3V140 540 aa11.66□□□□□ -0.54
Prpf40a-208ENSMUST00000210789 Rusc2Q80U22 1514 aa11.66□□□□□ -0.54
Prpf40a-208ENSMUST00000210789 Pcf11G3X9Z4 1553 aa11.66□□□□□ -0.54
Prpf40a-208ENSMUST00000210789 Soga1E1U8D0 1418 aa11.66□□□□□ -0.54
Prpf40a-208ENSMUST00000210789 Ncapd3Q6ZQK0 1506 aa11.65□□□□□ -0.54
Prpf40a-208ENSMUST00000210789 Hspa5P20029 655 aaKnown RBP11.65□□□□□ -0.54
Prpf40a-208ENSMUST00000210789 PogkQ80TC5 607 aa11.65□□□□□ -0.54
Prpf40a-208ENSMUST00000210789 Ofd1Q80Z25 1017 aa11.65□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 Eif4g3Q80XI3 1579 aaKnown RBP11.64□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 Tiam1Q60610 1591 aa11.64□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 L3mbtl2P59178 703 aa11.64□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 Jph4Q80WT0 628 aa11.63□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 Exoc6Q8R313 802 aa11.63□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 Gpatch8A2A6A1 1505 aa11.62□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 Gm13697A2AK42 830 aa11.62□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 Mre11Q61216 706 aa11.62□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 Adamts12Q811B3 1600 aa11.62□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 Pdia4P08003 638 aaKnown RBP11.61□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 Erich3F6QRE9 1637 aa11.61□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 MpndQ3TV65 487 aa11.61□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 Znf326O88291 580 aa11.6□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 Ttll13A4Q9F6 804 aa11.6□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 Fbxo2Q80UW2 297 aa11.6□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 Eif2s2Q99L45 331 aaKnown RBP11.59□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 Tex2Q6ZPJ0 1128 aaKnown RBP11.59□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 Pabpn1Q8CCS6 302 aaKnown RBP11.58□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 Dnajc14Q921R4 703 aa11.58□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 Tmem132aQ922P8 1018 aa11.58□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 Phf14Q9D4H9 881 aa11.58□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 Neo1P97798 1493 aa11.58□□□□□ -0.55
Prpf40a-208ENSMUST00000210789 Rrp12Q6P5B0 1295 aaKnown RBP11.58□□□□□ -0.56
Prpf40a-208ENSMUST00000210789 Arhgap31A6X8Z5 1425 aa11.58□□□□□ -0.56
Prpf40a-208ENSMUST00000210789 Rsph4aQ8BYM7 716 aa11.57□□□□□ -0.56
Prpf40a-208ENSMUST00000210789 Shroom2A2ALU4 1481 aa11.57□□□□□ -0.56
Prpf40a-208ENSMUST00000210789 Gm6268A2A3U9 297 aa11.56□□□□□ -0.56
Prpf40a-208ENSMUST00000210789 Zhx1P70121 873 aa11.56□□□□□ -0.56
Prpf40a-208ENSMUST00000210789 Chic2Q9D9G3 165 aa11.56□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms