RNA–Protein interactions for RNA: ENSMUST00000188338.6

Msh4-203, Transcript of MutS protein homolog 4, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Msh4, Length 2,802 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4-203ENSMUST00000188338 NexmifQ5DTT1 1515 aa13.32□□□□□ -0.28
Msh4-203ENSMUST00000188338 Pkd2O35245 966 aa13.31□□□□□ -0.28
Msh4-203ENSMUST00000188338 BC005561E9Q5E2 1589 aa13.31□□□□□ -0.28
Msh4-203ENSMUST00000188338 Zbtb7cQ8VCZ7 619 aa13.31□□□□□ -0.28
Msh4-203ENSMUST00000188338 Pla2r1Q62028 1487 aa13.31□□□□□ -0.28
Msh4-203ENSMUST00000188338 Anp32aO35381 247 aa13.3□□□□□ -0.28
Msh4-203ENSMUST00000188338 Polr1aO35134 1717 aaKnown RBP13.29□□□□□ -0.28
Msh4-203ENSMUST00000188338 Usp47Q8BY87 1376 aa13.29□□□□□ -0.28
Msh4-203ENSMUST00000188338 Zbtb4Q5F293 982 aa13.28□□□□□ -0.28
Msh4-203ENSMUST00000188338 Rgl3Q3UYI5 709 aa13.27□□□□□ -0.29
Msh4-203ENSMUST00000188338 Exoc6Q8R313 802 aa13.27□□□□□ -0.29
Msh4-203ENSMUST00000188338 Fgd1P52734 960 aa13.26□□□□□ -0.29
Msh4-203ENSMUST00000188338 Kif21aQ9QXL2 1672 aa13.26□□□□□ -0.29
Msh4-203ENSMUST00000188338 Ppp4r2Q0VGB7 417 aa13.26□□□□□ -0.29
Msh4-203ENSMUST00000188338 WizO88286 1684 aaKnown RBP13.25□□□□□ -0.29
Msh4-203ENSMUST00000188338 Arhgap27A2AB59 869 aa13.25□□□□□ -0.29
Msh4-203ENSMUST00000188338 Fkbp15Q6P9Q6 1216 aaKnown RBP13.25□□□□□ -0.29
Msh4-203ENSMUST00000188338 Slc4a2P13808 1237 aaKnown RBP13.24□□□□□ -0.29
Msh4-203ENSMUST00000188338 Lmtk2Q3TYD6 1471 aa13.23□□□□□ -0.29
Msh4-203ENSMUST00000188338 Magi3Q9EQJ9 1476 aa13.23□□□□□ -0.29
Msh4-203ENSMUST00000188338 WrnO09053 1401 aa13.23□□□□□ -0.29
Msh4-203ENSMUST00000188338 PxdnQ3UQ28 1475 aa13.23□□□□□ -0.29
Msh4-203ENSMUST00000188338 Grin2aP35436 1464 aa13.23□□□□□ -0.29
Msh4-203ENSMUST00000188338 Plb1Q3TTY0 1478 aa13.22□□□□□ -0.29
Msh4-203ENSMUST00000188338 NrdcQ8BHG1 1161 aa13.21□□□□□ -0.29
Msh4-203ENSMUST00000188338 Cul7Q8VE73 1689 aa13.21□□□□□ -0.29
Msh4-203ENSMUST00000188338 Abcc5Q9R1X5 1436 aa13.21□□□□□ -0.29
Msh4-203ENSMUST00000188338 Arhgef40Q3UPH7 1517 aa13.2□□□□□ -0.3
Msh4-203ENSMUST00000188338 Ift140E9PY46 1464 aa13.2□□□□□ -0.3
Msh4-203ENSMUST00000188338 Abca5Q8K448 1642 aa13.2□□□□□ -0.3
Msh4-203ENSMUST00000188338 Mug1P28665 1476 aa13.2□□□□□ -0.3
Msh4-203ENSMUST00000188338 Grwd1Q810D6 446 aaKnown RBP13.2□□□□□ -0.3
Msh4-203ENSMUST00000188338 Col17a1Q07563 1470 aa13.19□□□□□ -0.3
Msh4-203ENSMUST00000188338 Ncoa3O09000 1398 aa13.19□□□□□ -0.3
Msh4-203ENSMUST00000188338 Slc4a3P16283 1227 aa13.19□□□□□ -0.3
Msh4-203ENSMUST00000188338 Dhx9O70133 1380 aaKnown RBP13.19□□□□□ -0.3
Msh4-203ENSMUST00000188338 Kdm6bQ5NCY0 1641 aa13.18□□□□□ -0.3
Msh4-203ENSMUST00000188338 Plekhh2Q8C115 1491 aa13.18□□□□□ -0.3
Msh4-203ENSMUST00000188338 Mtus2Q3UHD3 1353 aa13.17□□□□□ -0.3
Msh4-203ENSMUST00000188338 Trak1Q6PD31 939 aa13.17□□□□□ -0.3
Msh4-203ENSMUST00000188338 Camsap2Q8C1B1 1461 aa13.16□□□□□ -0.3
Msh4-203ENSMUST00000188338 Supt16hQ920B9 1047 aa13.16□□□□□ -0.3
Msh4-203ENSMUST00000188338 Scaf1Q5U4C3 1256 aaKnown RBP13.16□□□□□ -0.3
Msh4-203ENSMUST00000188338 Pprc1Q6NZN1 1644 aa13.16□□□□□ -0.3
Msh4-203ENSMUST00000188338 Gcc2Q8CHG3 1679 aa13.15□□□□□ -0.3
Msh4-203ENSMUST00000188338 Ncoa1P70365 1447 aa13.15□□□□□ -0.3
Msh4-203ENSMUST00000188338 Wdr43Q6ZQL4 677 aaKnown RBP13.15□□□□□ -0.3
Msh4-203ENSMUST00000188338 Adgrb2Q8CGM1 1561 aa13.15□□□□□ -0.31
Msh4-203ENSMUST00000188338 Pbrm1Q8BSQ9 1634 aaKnown RBP13.14□□□□□ -0.31
Msh4-203ENSMUST00000188338 Q8BT18 775 aa13.14□□□□□ -0.31
Msh4-203ENSMUST00000188338 Disp1Q3TDN0 1521 aa13.14□□□□□ -0.31
Msh4-203ENSMUST00000188338 Rundc1Q0VDN7 615 aa13.13□□□□□ -0.31
Msh4-203ENSMUST00000188338 Rprd2Q6NXI6 1469 aaKnown RBP13.13□□□□□ -0.31
Msh4-203ENSMUST00000188338 SphkapQ6NSW3 1687 aa13.13□□□□□ -0.31
Msh4-203ENSMUST00000188338 Kcnh8P59111 1102 aa13.12□□□□□ -0.31
Msh4-203ENSMUST00000188338 Ttll5Q8CHB8 1328 aa13.11□□□□□ -0.31
Msh4-203ENSMUST00000188338 Gm13695A2AK44 830 aa13.11□□□□□ -0.31
Msh4-203ENSMUST00000188338 Soga1E1U8D0 1418 aa13.11□□□□□ -0.31
Msh4-203ENSMUST00000188338 Pak3Q61036 559 aa13.1□□□□□ -0.31
Msh4-203ENSMUST00000188338 Adamts12Q811B3 1600 aa13.09□□□□□ -0.31
Msh4-203ENSMUST00000188338 Fhod3Q76LL6 1578 aa13.08□□□□□ -0.31
Msh4-203ENSMUST00000188338 Setd1bQ8CFT2 1985 aa13.08□□□□□ -0.32
Msh4-203ENSMUST00000188338 Cc2d2bA0A286YDU8 1405 aa13.08□□□□□ -0.32
Msh4-203ENSMUST00000188338 Dapk1Q80YE7 1442 aa13.08□□□□□ -0.32
Msh4-203ENSMUST00000188338 Slc4a1apE9PX68 744 aa13.08□□□□□ -0.32
Msh4-203ENSMUST00000188338 Card11Q8CIS0 1159 aa13.08□□□□□ -0.32
Msh4-203ENSMUST00000188338 Ofd1Q80Z25 1017 aa13.08□□□□□ -0.32
Msh4-203ENSMUST00000188338 Tdrd9Q14BI7 1383 aa13.07□□□□□ -0.32
Msh4-203ENSMUST00000188338 Washc2Q6PGL7 1334 aa13.07□□□□□ -0.32
Msh4-203ENSMUST00000188338 Dhx57Q6P5D3 1388 aaKnown RBP13.07□□□□□ -0.32
Msh4-203ENSMUST00000188338 Abca16E9PWJ7 1678 aa13.07□□□□□ -0.32
Msh4-203ENSMUST00000188338 Adcy10Q8C0T9 1614 aa13.06□□□□□ -0.32
Msh4-203ENSMUST00000188338 Setbp1Q9Z180 1582 aa13.06□□□□□ -0.32
Msh4-203ENSMUST00000188338 Rfx7F8VPJ6 1459 aa13.06□□□□□ -0.32
Msh4-203ENSMUST00000188338 Ncbp3Q8BZR9 615 aaKnown RBP13.06□□□□□ -0.32
Msh4-203ENSMUST00000188338 Kif14L0N7N1 1674 aaKnown RBP13.05□□□□□ -0.32
Msh4-203ENSMUST00000188338 PnisrA2AJT4 805 aaKnown RBP13.05□□□□□ -0.32
Msh4-203ENSMUST00000188338 Arhgap31A6X8Z5 1425 aa13.05□□□□□ -0.32
Msh4-203ENSMUST00000188338 AlkP97793 1621 aa13.05□□□□□ -0.32
Msh4-203ENSMUST00000188338 Rapgef6Q5NCJ1 1609 aa13.04□□□□□ -0.32
Msh4-203ENSMUST00000188338 Supt6hQ62383 1726 aaKnown RBP13.03□□□□□ -0.32
Msh4-203ENSMUST00000188338 Pik3c2gO70167 1506 aa13.03□□□□□ -0.32
Msh4-203ENSMUST00000188338 Kdm3bQ6ZPY7 1562 aa13.02□□□□□ -0.33
Msh4-203ENSMUST00000188338 Rusc2Q80U22 1514 aa13.01□□□□□ -0.33
Msh4-203ENSMUST00000188338 Rad21Q61550 635 aaKnown RBP13.01□□□□□ -0.33
Msh4-203ENSMUST00000188338 Map4P27546 1125 aaKnown RBP13□□□□□ -0.33
Msh4-203ENSMUST00000188338 L3mbtl2P59178 703 aa13□□□□□ -0.33
Msh4-203ENSMUST00000188338 Znf316Q6PGE4 1016 aa13□□□□□ -0.33
Msh4-203ENSMUST00000188338 Cdk13Q69ZA1 1511 aaKnown RBP13□□□□□ -0.33
Msh4-203ENSMUST00000188338 Arhgef11Q68FM7 1552 aa13□□□□□ -0.33
Msh4-203ENSMUST00000188338 Mug2P28666 1451 aa13□□□□□ -0.33
Msh4-203ENSMUST00000188338 Nup155Q99P88 1391 aaKnown RBP12.99□□□□□ -0.33
Msh4-203ENSMUST00000188338 Prex2Q3LAC4 1598 aa12.99□□□□□ -0.33
Msh4-203ENSMUST00000188338 Zfp777B9EKF4 885 aa12.99□□□□□ -0.33
Msh4-203ENSMUST00000188338 Hdac5Q9Z2V6 1113 aa12.99□□□□□ -0.33
Msh4-203ENSMUST00000188338 Liat1Q810M6 228 aa12.98□□□□□ -0.33
Msh4-203ENSMUST00000188338 Cdc42bpaQ3UU96 1719 aa12.98□□□□□ -0.33
Msh4-203ENSMUST00000188338 Rrp7aQ9D1C9 280 aaKnown RBP12.97□□□□□ -0.33
Msh4-203ENSMUST00000188338 Il16O54824 1322 aa12.96□□□□□ -0.33
Msh4-203ENSMUST00000188338 Cwc22Q8C5N3 908 aaKnown RBP12.96□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms