RNA–Protein interactions for RNA: ENSMUST00000067284.9

Cpsf3-201, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf3, Length 2,499 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-201ENSMUST00000067284 Pelp1Q9DBD5 1123 aaKnown RBP13.47□□□□□ -0.25
Cpsf3-201ENSMUST00000067284 Abcc5Q9R1X5 1436 aa13.46□□□□□ -0.25
Cpsf3-201ENSMUST00000067284 Abcc2Q8VI47 1543 aa13.46□□□□□ -0.25
Cpsf3-201ENSMUST00000067284 Fhod3Q76LL6 1578 aa13.45□□□□□ -0.26
Cpsf3-201ENSMUST00000067284 Ift140E9PY46 1464 aa13.45□□□□□ -0.26
Cpsf3-201ENSMUST00000067284 Rapgef6Q5NCJ1 1609 aa13.45□□□□□ -0.26
Cpsf3-201ENSMUST00000067284 Hnrnpul2Q00PI9 745 aaKnown RBP13.45□□□□□ -0.26
Cpsf3-201ENSMUST00000067284 SphkapQ6NSW3 1687 aa13.43□□□□□ -0.26
Cpsf3-201ENSMUST00000067284 Cdc42bpaQ3UU96 1719 aa13.43□□□□□ -0.26
Cpsf3-201ENSMUST00000067284 Lrriq1Q0P5X1 1673 aa13.43□□□□□ -0.26
Cpsf3-201ENSMUST00000067284 Shroom2A2ALU4 1481 aa13.42□□□□□ -0.26
Cpsf3-201ENSMUST00000067284 Arhgef11Q68FM7 1552 aa13.42□□□□□ -0.26
Cpsf3-201ENSMUST00000067284 Setbp1Q9Z180 1582 aa13.41□□□□□ -0.26
Cpsf3-201ENSMUST00000067284 Adcy10Q8C0T9 1614 aa13.41□□□□□ -0.26
Cpsf3-201ENSMUST00000067284 Anp32aO35381 247 aa13.4□□□□□ -0.26
Cpsf3-201ENSMUST00000067284 Pbrm1Q8BSQ9 1634 aaKnown RBP13.4□□□□□ -0.26
Cpsf3-201ENSMUST00000067284 Camsap2Q8C1B1 1461 aa13.39□□□□□ -0.27
Cpsf3-201ENSMUST00000067284 Rfx7F8VPJ6 1459 aa13.39□□□□□ -0.27
Cpsf3-201ENSMUST00000067284 Plekhh2Q8C115 1491 aa13.39□□□□□ -0.27
Cpsf3-201ENSMUST00000067284 Pkd2O35245 966 aa13.38□□□□□ -0.27
Cpsf3-201ENSMUST00000067284 Adgrb2Q8CGM1 1561 aa13.38□□□□□ -0.27
Cpsf3-201ENSMUST00000067284 Arhgap31A6X8Z5 1425 aa13.38□□□□□ -0.27
Cpsf3-201ENSMUST00000067284 Usp47Q8BY87 1376 aa13.36□□□□□ -0.27
Cpsf3-201ENSMUST00000067284 SafbD3YXK2 937 aaKnown RBP13.36□□□□□ -0.27
Cpsf3-201ENSMUST00000067284 Znf710Q3U288 666 aa13.36□□□□□ -0.27
Cpsf3-201ENSMUST00000067284 Kiaa1551Q5DTW7 1521 aa13.35□□□□□ -0.27
Cpsf3-201ENSMUST00000067284 Zcchc11B2RX14 1644 aaKnown RBP13.35□□□□□ -0.27
Cpsf3-201ENSMUST00000067284 Mroh2aD3Z750 1679 aa13.35□□□□□ -0.27
Cpsf3-201ENSMUST00000067284 Mtus2Q3UHD3 1353 aa13.35□□□□□ -0.27
Cpsf3-201ENSMUST00000067284 Cc2d2bA0A286YDU8 1405 aa13.34□□□□□ -0.27
Cpsf3-201ENSMUST00000067284 Ifnlr1Q8CGK5 535 aa13.34□□□□□ -0.27
Cpsf3-201ENSMUST00000067284 Pprc1Q6NZN1 1644 aa13.33□□□□□ -0.27
Cpsf3-201ENSMUST00000067284 Kdm3bQ6ZPY7 1562 aa13.33□□□□□ -0.28
Cpsf3-201ENSMUST00000067284 Fkbp15Q6P9Q6 1216 aaKnown RBP13.33□□□□□ -0.28
Cpsf3-201ENSMUST00000067284 Prex2Q3LAC4 1598 aa13.33□□□□□ -0.28
Cpsf3-201ENSMUST00000067284 Ccdc9Q8VC31 543 aaKnown RBP13.33□□□□□ -0.28
Cpsf3-201ENSMUST00000067284 AlkP97793 1621 aa13.33□□□□□ -0.28
Cpsf3-201ENSMUST00000067284 Rprd2Q6NXI6 1469 aaKnown RBP13.32□□□□□ -0.28
Cpsf3-201ENSMUST00000067284 Smg6P61406 1418 aaKnown RBP13.3□□□□□ -0.28
Cpsf3-201ENSMUST00000067284 Magi1Q6RHR9 1471 aa13.3□□□□□ -0.28
Cpsf3-201ENSMUST00000067284 Supt6hQ62383 1726 aaKnown RBP13.3□□□□□ -0.28
Cpsf3-201ENSMUST00000067284 NrdcQ8BHG1 1161 aa13.3□□□□□ -0.28
Cpsf3-201ENSMUST00000067284 Dhx9O70133 1380 aaKnown RBP13.29□□□□□ -0.28
Cpsf3-201ENSMUST00000067284 Tdrd9Q14BI7 1383 aa13.28□□□□□ -0.28
Cpsf3-201ENSMUST00000067284 Fgd1P52734 960 aa13.28□□□□□ -0.28
Cpsf3-201ENSMUST00000067284 Slc24a1Q91WD8 1130 aa13.28□□□□□ -0.28
Cpsf3-201ENSMUST00000067284 Il16O54824 1322 aa13.28□□□□□ -0.28
Cpsf3-201ENSMUST00000067284 Ccdc141E9Q8Q6 1531 aa13.27□□□□□ -0.28
Cpsf3-201ENSMUST00000067284 Kif14L0N7N1 1674 aaKnown RBP13.27□□□□□ -0.29
Cpsf3-201ENSMUST00000067284 Mapkbp1Q6NS57 1503 aa13.27□□□□□ -0.29
Cpsf3-201ENSMUST00000067284 Ttll5Q8CHB8 1328 aa13.27□□□□□ -0.29
Cpsf3-201ENSMUST00000067284 Hdac5Q9Z2V6 1113 aa13.27□□□□□ -0.29
Cpsf3-201ENSMUST00000067284 Kif21bQ9QXL1 1668 aa13.26□□□□□ -0.29
Cpsf3-201ENSMUST00000067284 Neo1P97798 1493 aa13.26□□□□□ -0.29
Cpsf3-201ENSMUST00000067284 Lamc1P02468 1607 aaKnown RBP13.25□□□□□ -0.29
Cpsf3-201ENSMUST00000067284 Dnmt1P13864 1620 aaKnown RBP13.25□□□□□ -0.29
Cpsf3-201ENSMUST00000067284 Map3k4O08648 1597 aa13.25□□□□□ -0.29
Cpsf3-201ENSMUST00000067284 Pik3c2gO70167 1506 aa13.25□□□□□ -0.29
Cpsf3-201ENSMUST00000067284 Fam163aQ8CAA5 168 aa13.24□□□□□ -0.29
Cpsf3-201ENSMUST00000067284 Ncoa1P70365 1447 aa13.24□□□□□ -0.29
Cpsf3-201ENSMUST00000067284 Rusc2Q80U22 1514 aa13.24□□□□□ -0.29
Cpsf3-201ENSMUST00000067284 Rgl3Q3UYI5 709 aa13.24□□□□□ -0.29
Cpsf3-201ENSMUST00000067284 Trak1Q6PD31 939 aa13.24□□□□□ -0.29
Cpsf3-201ENSMUST00000067284 Dhx57Q6P5D3 1388 aaKnown RBP13.23□□□□□ -0.29
Cpsf3-201ENSMUST00000067284 Jph4Q80WT0 628 aa13.21□□□□□ -0.29
Cpsf3-201ENSMUST00000067284 AknaQ80VW7 1404 aa13.2□□□□□ -0.3
Cpsf3-201ENSMUST00000067284 Stra8P70278 393 aa13.19□□□□□ -0.3
Cpsf3-201ENSMUST00000067284 Zbtb7cQ8VCZ7 619 aa13.19□□□□□ -0.3
Cpsf3-201ENSMUST00000067284 Arhgef12Q8R4H2 1543 aaKnown RBP13.19□□□□□ -0.3
Cpsf3-201ENSMUST00000067284 Wwc2Q6NXJ0 1187 aa13.19□□□□□ -0.3
Cpsf3-201ENSMUST00000067284 Mlh3A0A1Y7VMP7 1443 aa13.17□□□□□ -0.3
Cpsf3-201ENSMUST00000067284 Trpm2Q91YD4 1506 aa13.17□□□□□ -0.3
Cpsf3-201ENSMUST00000067284 Nup155Q99P88 1391 aaKnown RBP13.17□□□□□ -0.3
Cpsf3-201ENSMUST00000067284 Wdr7Q920I9 1489 aa13.16□□□□□ -0.3
Cpsf3-201ENSMUST00000067284 Mrs2Q5NCE8 434 aa13.16□□□□□ -0.3
Cpsf3-201ENSMUST00000067284 Slc4a2P13808 1237 aaKnown RBP13.15□□□□□ -0.3
Cpsf3-201ENSMUST00000067284 Grwd1Q810D6 446 aaKnown RBP13.15□□□□□ -0.3
Cpsf3-201ENSMUST00000067284 Pknox2Q8BG99 474 aa13.15□□□□□ -0.3
Cpsf3-201ENSMUST00000067284 Dapk1Q80YE7 1442 aa13.15□□□□□ -0.31
Cpsf3-201ENSMUST00000067284 Mbd5B1AYB6 1498 aa13.15□□□□□ -0.31
Cpsf3-201ENSMUST00000067284 Mug2P28666 1451 aa13.15□□□□□ -0.31
Cpsf3-201ENSMUST00000067284 Rundc1Q0VDN7 615 aa13.14□□□□□ -0.31
Cpsf3-201ENSMUST00000067284 Map4P27546 1125 aaKnown RBP13.14□□□□□ -0.31
Cpsf3-201ENSMUST00000067284 Fam208aQ69ZR9 1610 aaKnown RBP13.14□□□□□ -0.31
Cpsf3-201ENSMUST00000067284 Exoc6Q8R313 802 aa13.14□□□□□ -0.31
Cpsf3-201ENSMUST00000067284 Fancd2Q80V62 1450 aa13.13□□□□□ -0.31
Cpsf3-201ENSMUST00000067284 Caskin1Q6P9K8 1431 aa13.13□□□□□ -0.31
Cpsf3-201ENSMUST00000067284 Eif4g3Q80XI3 1579 aaKnown RBP13.12□□□□□ -0.31
Cpsf3-201ENSMUST00000067284 Cdk13Q69ZA1 1511 aaKnown RBP13.12□□□□□ -0.31
Cpsf3-201ENSMUST00000067284 Trappc8E9PWG2 1437 aa13.12□□□□□ -0.31
Cpsf3-201ENSMUST00000067284 Rrbp1Q99PL5 1605 aaKnown RBP13.11□□□□□ -0.31
Cpsf3-201ENSMUST00000067284 Asxl1P59598 1514 aa13.11□□□□□ -0.31
Cpsf3-201ENSMUST00000067284 Rrp7aQ9D1C9 280 aaKnown RBP13.1□□□□□ -0.31
Cpsf3-201ENSMUST00000067284 Fmn2Q9JL04 1578 aa13.1□□□□□ -0.31
Cpsf3-201ENSMUST00000067284 Upf2A2AT37 1269 aaKnown RBP13.1□□□□□ -0.31
Cpsf3-201ENSMUST00000067284 Ssh2Q5SW75 1423 aa13.09□□□□□ -0.31
Cpsf3-201ENSMUST00000067284 Gm13695A2AK44 830 aa13.09□□□□□ -0.31
Cpsf3-201ENSMUST00000067284 Fgd6Q69ZL1 1399 aa13.09□□□□□ -0.31
Cpsf3-201ENSMUST00000067284 Gtf3c3Q3TMP1 882 aa13.08□□□□□ -0.31
Cpsf3-201ENSMUST00000067284 Card11Q8CIS0 1159 aa13.08□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms