RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Ankrd36D3Z4K0 1415 aa13.11□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 A2mQ6GQT1 1474 aa13.1□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 Trak1Q6PD31 939 aa13.1□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 Card11Q8CIS0 1159 aa13.1□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 Naip2Q9QUK4 1447 aa13.1□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 Gm1043A0A140LJC2 1431 aa13.09□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 UacaQ8CGB3 1411 aa13.09□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 Erich3F6QRE9 1637 aa13.09□□□□□ -0.31
Pcdh1-201ENSMUST00000057185 Crocc2F6XLV1 1638 aa13.08□□□□□ -0.32
Pcdh1-201ENSMUST00000057185 Usp47Q8BY87 1376 aa13.08□□□□□ -0.32
Pcdh1-201ENSMUST00000057185 Plekhh2Q8C115 1491 aa13.07□□□□□ -0.32
Pcdh1-201ENSMUST00000057185 Kdm5bQ80Y84 1544 aa13.07□□□□□ -0.32
Pcdh1-201ENSMUST00000057185 Rundc1Q0VDN7 615 aa13.07□□□□□ -0.32
Pcdh1-201ENSMUST00000057185 DaxxO35613 739 aa13.06□□□□□ -0.32
Pcdh1-201ENSMUST00000057185 Rrp7aQ9D1C9 280 aaKnown RBP13.06□□□□□ -0.32
Pcdh1-201ENSMUST00000057185 Pabpn1Q8CCS6 302 aaKnown RBP13.05□□□□□ -0.32
Pcdh1-201ENSMUST00000057185 AknaQ80VW7 1404 aa13.03□□□□□ -0.32
Pcdh1-201ENSMUST00000057185 ArxO35085 564 aa13.03□□□□□ -0.32
Pcdh1-201ENSMUST00000057185 Lmo7E9PYF4 1699 aaKnown RBP13.02□□□□□ -0.32
Pcdh1-201ENSMUST00000057185 Gpatch8A2A6A1 1505 aa13.02□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 NexmifQ5DTT1 1515 aa13.02□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Kif21aQ9QXL2 1672 aa13.02□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Grin2aP35436 1464 aa13.02□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Map4P27546 1125 aaKnown RBP13.02□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Gm13695A2AK44 830 aa13.01□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Slc4a2P13808 1237 aaKnown RBP13.01□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Tdrd9Q14BI7 1383 aa13□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Cwc22Q8C5N3 908 aaKnown RBP12.99□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Pla2r1Q62028 1487 aa12.99□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Cc2d2bA0A286YDU8 1405 aa12.98□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Apbb1Q9QXJ1 710 aa12.98□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Ift140E9PY46 1464 aa12.98□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Plppr3Q7TPB0 716 aa12.97□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Pak3Q61036 559 aa12.96□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 BC005561E9Q5E2 1589 aa12.96□□□□□ -0.33
Pcdh1-201ENSMUST00000057185 Polr3glQ8R0C0 218 aa12.96□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Nlrp6Q91WS2 869 aa12.96□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Arhgap31A6X8Z5 1425 aa12.95□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Kdm2aP59997 1161 aa12.95□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Clstn2Q9ER65 966 aa12.94□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Nup155Q99P88 1391 aaKnown RBP12.94□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Abcc5Q9R1X5 1436 aa12.94□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 PxdnQ3UQ28 1475 aa12.94□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Naip5Q9R016 1403 aa12.94□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Mug1P28665 1476 aa12.94□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Ncoa2Q61026 1462 aa12.93□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 WizO88286 1684 aaKnown RBP12.93□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 B4galnt3Q6L8S8 986 aa12.93□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Dbr1Q923B1 550 aa12.93□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Dhx9O70133 1380 aaKnown RBP12.93□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Rangap1P46061 589 aaKnown RBP12.92□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Kcnh8P59111 1102 aa12.92□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Disp1Q3TDN0 1521 aa12.91□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Lrriq1Q0P5X1 1673 aa12.91□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Ncoa3O09000 1398 aa12.91□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Magi3Q9EQJ9 1476 aa12.9□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Soga1E1U8D0 1418 aa12.9□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Ttll5Q8CHB8 1328 aa12.9□□□□□ -0.34
Pcdh1-201ENSMUST00000057185 Jph4Q80WT0 628 aa12.89□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Peg3Q3URU2 1571 aa12.89□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Mroh3A0A1D5RM54 893 aa12.89□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Neurod2Q62414 383 aa12.89□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Dhx57Q6P5D3 1388 aaKnown RBP12.89□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Sart1Q9Z315 806 aaKnown RBP12.88□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Dapk1Q80YE7 1442 aa12.88□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Upf2A2AT37 1269 aaKnown RBP12.88□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Tcerg1Q8CGF7 1100 aaKnown RBP12.88□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 CanxP35564 591 aaKnown RBP12.87□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Ifit1bl1D3Z6F0 470 aa12.87□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Ccdc27Q3V036 639 aa12.87□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Washc2Q6PGL7 1334 aa12.85□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Arid3cA6PWV5 409 aa12.85□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 ChgaP26339 463 aaKnown RBP12.84□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Zscan21Q07231 555 aa12.84□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 Trim26Q99PN3 545 aa12.84□□□□□ -0.35
Pcdh1-201ENSMUST00000057185 PnisrA2AJT4 805 aaKnown RBP12.83□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Lmtk2Q3TYD6 1471 aa12.83□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Hsp90aa1P07901 733 aaKnown RBP12.82□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Rpgrip1lQ8CG73 1264 aa12.82□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Arhgef40Q3UPH7 1517 aa12.81□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Ppp1r18Q8BQ30 594 aa12.81□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Mak16Q8BGS0 296 aaKnown RBP12.8□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Trim30dE9PWL0 497 aa12.8□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 CrbnQ8C7D2 445 aa12.8□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Stk24Q99KH8 431 aa12.79□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Il16O54824 1322 aa12.79□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Abca5Q8K448 1642 aa12.79□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Rprd2Q6NXI6 1469 aaKnown RBP12.79□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Q7TT23 1179 aa12.79□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Fam163aQ8CAA5 168 aa12.79□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Ccdc141E9Q8Q6 1531 aa12.78□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Atp1b4Q99ME6 356 aa12.78□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Fgd6Q69ZL1 1399 aa12.78□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Ipo9Q91YE6 1041 aa12.78□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Rfx7F8VPJ6 1459 aa12.78□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Magi1Q6RHR9 1471 aa12.78□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Cnga1P29974 684 aa12.78□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 PrkcshO08795 521 aa12.77□□□□□ -0.36
Pcdh1-201ENSMUST00000057185 Neo1P97798 1493 aa12.77□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 L3mbtl2P59178 703 aa12.77□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 48.9 ms