RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Calr4Q3TQS0 420 aa26.51■■□□□ 1.83
Ccdc50-201ENSMUST00000039443 BC005561E9Q5E2 1589 aa26.5■■□□□ 1.83
Ccdc50-201ENSMUST00000039443 Dennd4bQ3U1Y4 1499 aa26.49■■□□□ 1.83
Ccdc50-201ENSMUST00000039443 Abcc1O35379 1528 aa26.49■■□□□ 1.83
Ccdc50-201ENSMUST00000039443 Rtl5Q5DTT4 599 aa26.48■■□□□ 1.83
Ccdc50-201ENSMUST00000039443 Neo1P97798 1493 aa26.48■■□□□ 1.83
Ccdc50-201ENSMUST00000039443 Pprc1Q6NZN1 1644 aa26.47■■□□□ 1.83
Ccdc50-201ENSMUST00000039443 Gcc2Q8CHG3 1679 aa26.45■■□□□ 1.82
Ccdc50-201ENSMUST00000039443 Ccnb3Q810T2 1396 aa26.44■■□□□ 1.82
Ccdc50-201ENSMUST00000039443 Setbp1Q9Z180 1582 aa26.4■■□□□ 1.82
Ccdc50-201ENSMUST00000039443 WrnO09053 1401 aa26.4■■□□□ 1.82
Ccdc50-201ENSMUST00000039443 Rfx7F8VPJ6 1459 aa26.4■■□□□ 1.82
Ccdc50-201ENSMUST00000039443 Chd1P40201 1711 aa26.4■■□□□ 1.82
Ccdc50-201ENSMUST00000039443 Ube2uB1AUC4 352 aa26.37■■□□□ 1.81
Ccdc50-201ENSMUST00000039443 Gm14025A2AP89 1413 aa26.37■■□□□ 1.81
Ccdc50-201ENSMUST00000039443 Col17a1Q07563 1470 aa26.33■■□□□ 1.81
Ccdc50-201ENSMUST00000039443 Gapvd1Q6PAR5 1458 aa26.33■■□□□ 1.81
Ccdc50-201ENSMUST00000039443 Sin3aQ60520 1274 aaKnown RBP26.33■■□□□ 1.81
Ccdc50-201ENSMUST00000039443 Arhgef12Q8R4H2 1543 aaKnown RBP26.32■■□□□ 1.8
Ccdc50-201ENSMUST00000039443 Jph4Q80WT0 628 aa26.31■■□□□ 1.8
Ccdc50-201ENSMUST00000039443 Zcchc11B2RX14 1644 aaKnown RBP26.3■■□□□ 1.8
Ccdc50-201ENSMUST00000039443 Washc2Q6PGL7 1334 aa26.29■■□□□ 1.8
Ccdc50-201ENSMUST00000039443 Mphosph9A6H5Y1 991 aa26.27■■□□□ 1.8
Ccdc50-201ENSMUST00000039443 Ythdc2B2RR83 1445 aaKnown RBP26.27■■□□□ 1.8
Ccdc50-201ENSMUST00000039443 Ncoa1P70365 1447 aa26.27■■□□□ 1.8
Ccdc50-201ENSMUST00000039443 Cep170Q6A065 1588 aa26.27■■□□□ 1.8
Ccdc50-201ENSMUST00000039443 Chic2Q9D9G3 165 aa26.26■■□□□ 1.79
Ccdc50-201ENSMUST00000039443 Kif27Q7M6Z4 1394 aa26.26■■□□□ 1.79
Ccdc50-201ENSMUST00000039443 Rrbp1Q99PL5 1605 aaKnown RBP26.25■■□□□ 1.79
Ccdc50-201ENSMUST00000039443 NexmifQ5DTT1 1515 aa26.25■■□□□ 1.79
Ccdc50-201ENSMUST00000039443 Nolc1E9Q5C9 702 aaKnown RBP26.22■■□□□ 1.79
Ccdc50-201ENSMUST00000039443 Rprd2Q6NXI6 1469 aaKnown RBP26.21■■□□□ 1.79
Ccdc50-201ENSMUST00000039443 Gm13695A2AK44 830 aa26.2■■□□□ 1.79
Ccdc50-201ENSMUST00000039443 Mug1P28665 1476 aa26.19■■□□□ 1.78
Ccdc50-201ENSMUST00000039443 PtprtQ99M80 1454 aa26.17■■□□□ 1.78
Ccdc50-201ENSMUST00000039443 Dnajc5P60904 198 aa26.17■■□□□ 1.78
Ccdc50-201ENSMUST00000039443 Arhgap31A6X8Z5 1425 aa26.17■■□□□ 1.78
Ccdc50-201ENSMUST00000039443 Rapgef6Q5NCJ1 1609 aa26.15■■□□□ 1.78
Ccdc50-201ENSMUST00000039443 Slc24a1Q91WD8 1130 aa26.14■■□□□ 1.77
Ccdc50-201ENSMUST00000039443 Lamc1P02468 1607 aaKnown RBP26.13■■□□□ 1.77
Ccdc50-201ENSMUST00000039443 Usp47Q8BY87 1376 aa26.13■■□□□ 1.77
Ccdc50-201ENSMUST00000039443 Adgrl3Q80TS3 1537 aa26.13■■□□□ 1.77
Ccdc50-201ENSMUST00000039443 Ccdc141E9Q8Q6 1531 aa26.12■■□□□ 1.77
Ccdc50-201ENSMUST00000039443 Gm156Q58A37 223 aa26.11■■□□□ 1.77
Ccdc50-201ENSMUST00000039443 Wdr43Q6ZQL4 677 aaKnown RBP26.11■■□□□ 1.77
Ccdc50-201ENSMUST00000039443 Mrs2Q5NCE8 434 aa26.1■■□□□ 1.77
Ccdc50-201ENSMUST00000039443 Supt16hQ920B9 1047 aa26.09■■□□□ 1.77
Ccdc50-201ENSMUST00000039443 Plekhh2Q8C115 1491 aa26.09■■□□□ 1.77
Ccdc50-201ENSMUST00000039443 Pik3c2gO70167 1506 aa26.08■■□□□ 1.77
Ccdc50-201ENSMUST00000039443 NrdcQ8BHG1 1161 aa26.07■■□□□ 1.76
Ccdc50-201ENSMUST00000039443 Pkd2O35245 966 aa26.06■■□□□ 1.76
Ccdc50-201ENSMUST00000039443 Kif21bQ9QXL1 1668 aa26.06■■□□□ 1.76
Ccdc50-201ENSMUST00000039443 Abcc5Q9R1X5 1436 aa26.05■■□□□ 1.76
Ccdc50-201ENSMUST00000039443 AI481877A2ALV5 1481 aa26.04■■□□□ 1.76
Ccdc50-201ENSMUST00000039443 Fkbp15Q6P9Q6 1216 aaKnown RBP26.04■■□□□ 1.76
Ccdc50-201ENSMUST00000039443 Slc4a2P13808 1237 aaKnown RBP26.02■■□□□ 1.76
Ccdc50-201ENSMUST00000039443 DiexfQ8BTT6 772 aaKnown RBP26.02■■□□□ 1.76
Ccdc50-201ENSMUST00000039443 Cabp1Q9JLK7 227 aa26.02■■□□□ 1.76
Ccdc50-201ENSMUST00000039443 Mroh2aD3Z750 1679 aa26.01■■□□□ 1.75
Ccdc50-201ENSMUST00000039443 Ppp4r2Q0VGB7 417 aa26■■□□□ 1.75
Ccdc50-201ENSMUST00000039443 Arhgef11Q68FM7 1552 aa26■■□□□ 1.75
Ccdc50-201ENSMUST00000039443 Igf1rQ60751 1373 aa25.99■■□□□ 1.75
Ccdc50-201ENSMUST00000039443 Cwc22Q8C5N3 908 aaKnown RBP25.98■■□□□ 1.75
Ccdc50-201ENSMUST00000039443 PnisrA2AJT4 805 aaKnown RBP25.97■■□□□ 1.75
Ccdc50-201ENSMUST00000039443 Il16O54824 1322 aa25.96■■□□□ 1.75
Ccdc50-201ENSMUST00000039443 Bcl11aQ9QYE3 773 aa25.96■■□□□ 1.75
Ccdc50-201ENSMUST00000039443 Magi1Q6RHR9 1471 aa25.95■■□□□ 1.75
Ccdc50-201ENSMUST00000039443 Eif5bQ05D44 1216 aaKnown RBP25.95■■□□□ 1.74
Ccdc50-201ENSMUST00000039443 Plekhg5Q66T02 1073 aa25.95■■□□□ 1.74
Ccdc50-201ENSMUST00000039443 NhsB1AV60 1647 aa25.95■■□□□ 1.74
Ccdc50-201ENSMUST00000039443 Exoc6Q8R313 802 aa25.94■■□□□ 1.74
Ccdc50-201ENSMUST00000039443 Ncoa3O09000 1398 aa25.93■■□□□ 1.74
Ccdc50-201ENSMUST00000039443 Mtus2Q3UHD3 1353 aa25.93■■□□□ 1.74
Ccdc50-201ENSMUST00000039443 Kdm3bQ6ZPY7 1562 aa25.92■■□□□ 1.74
Ccdc50-201ENSMUST00000039443 Fancd2Q80V62 1450 aa25.91■■□□□ 1.74
Ccdc50-201ENSMUST00000039443 Wwc2Q6NXJ0 1187 aa25.91■■□□□ 1.74
Ccdc50-201ENSMUST00000039443 Kiaa1210E9Q0C6 1637 aa25.89■■□□□ 1.74
Ccdc50-201ENSMUST00000039443 Dhx57Q6P5D3 1388 aaKnown RBP25.89■■□□□ 1.74
Ccdc50-201ENSMUST00000039443 Mbd5B1AYB6 1498 aa25.89■■□□□ 1.73
Ccdc50-201ENSMUST00000039443 Arhgef40Q3UPH7 1517 aa25.89■■□□□ 1.73
Ccdc50-201ENSMUST00000039443 Fam163aQ8CAA5 168 aa25.89■■□□□ 1.73
Ccdc50-201ENSMUST00000039443 SphkapQ6NSW3 1687 aa25.88■■□□□ 1.73
Ccdc50-201ENSMUST00000039443 DroshaQ5HZJ0 1373 aaKnown RBP25.86■■□□□ 1.73
Ccdc50-201ENSMUST00000039443 Kiaa1551Q5DTW7 1521 aa25.85■■□□□ 1.73
Ccdc50-201ENSMUST00000039443 Zfp644E9QA22 1323 aa25.85■■□□□ 1.73
Ccdc50-201ENSMUST00000039443 Lrrc9Q8CDN9 1456 aa25.84■■□□□ 1.73
Ccdc50-201ENSMUST00000039443 AlkP97793 1621 aa25.84■■□□□ 1.73
Ccdc50-201ENSMUST00000039443 Wdr7Q920I9 1489 aa25.83■■□□□ 1.73
Ccdc50-201ENSMUST00000039443 Cdc42bpaQ3UU96 1719 aa25.83■■□□□ 1.73
Ccdc50-201ENSMUST00000039443 Kdm6bQ5NCY0 1641 aa25.83■■□□□ 1.72
Ccdc50-201ENSMUST00000039443 Adcy10Q8C0T9 1614 aa25.83■■□□□ 1.72
Ccdc50-201ENSMUST00000039443 Prex2Q3LAC4 1598 aa25.82■■□□□ 1.72
Ccdc50-201ENSMUST00000039443 Mapkbp1Q6NS57 1503 aa25.81■■□□□ 1.72
Ccdc50-201ENSMUST00000039443 Ak9G3UYQ4 1894 aa25.81■■□□□ 1.72
Ccdc50-201ENSMUST00000039443 Dapk1Q80YE7 1442 aa25.81■■□□□ 1.72
Ccdc50-201ENSMUST00000039443 Ifnlr1Q8CGK5 535 aa25.8■■□□□ 1.72
Ccdc50-201ENSMUST00000039443 Atp10dQ8K2X1 1416 aa25.8■■□□□ 1.72
Ccdc50-201ENSMUST00000039443 Naip6Q9JIB6 1403 aa25.78■■□□□ 1.72
Ccdc50-201ENSMUST00000039443 Znf608Q56A10 1511 aa25.77■■□□□ 1.72
Ccdc50-201ENSMUST00000039443 Kif14L0N7N1 1674 aaKnown RBP25.75■■□□□ 1.71
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms