RNA–Protein interactions for RNA: ENSMUST00000028288.4

Notch1-201, Transcript of Neurogenic locus notch homolog protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Notch1, Length 9,488 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1-201ENSMUST00000028288 Cttnbp2B9EJA2 1648 aa17.15■□□□□ 0.34
Notch1-201ENSMUST00000028288 Kif27Q7M6Z4 1394 aa17.15■□□□□ 0.34
Notch1-201ENSMUST00000028288 Chmp5Q9D7S9 219 aa17.14■□□□□ 0.33
Notch1-201ENSMUST00000028288 Pkd2O35245 966 aa17.14■□□□□ 0.33
Notch1-201ENSMUST00000028288 Tnnt2P50752 301 aa17.14■□□□□ 0.33
Notch1-201ENSMUST00000028288 EspnQ9ET47 871 aa17.14■□□□□ 0.33
Notch1-201ENSMUST00000028288 Ipo9Q91YE6 1041 aa17.13■□□□□ 0.33
Notch1-201ENSMUST00000028288 Sh3bp5Q9Z131 463 aa17.13■□□□□ 0.33
Notch1-201ENSMUST00000028288 Exoc6Q8R313 802 aa17.13■□□□□ 0.33
Notch1-201ENSMUST00000028288 AU015836B2RUM3 263 aa17.13■□□□□ 0.33
Notch1-201ENSMUST00000028288 Synj1Q8CHC4 1574 aa17.1■□□□□ 0.33
Notch1-201ENSMUST00000028288 Speer4f1Q9D5Q6 258 aa17.09■□□□□ 0.33
Notch1-201ENSMUST00000028288 HnrnpuQ8VEK3 800 aaKnown RBP17.08■□□□□ 0.33
Notch1-201ENSMUST00000028288 Pcmtd1P59913 357 aa17.08■□□□□ 0.33
Notch1-201ENSMUST00000028288 Ifit1bl1D3Z6F0 470 aa17.08■□□□□ 0.32
Notch1-201ENSMUST00000028288 Rassf8Q8CJ96 419 aa17.07■□□□□ 0.32
Notch1-201ENSMUST00000028288 Plekhh2Q8C115 1491 aa17.07■□□□□ 0.32
Notch1-201ENSMUST00000028288 Rpap1Q80TE0 1409 aa17.07■□□□□ 0.32
Notch1-201ENSMUST00000028288 Znf316Q6PGE4 1016 aa17.07■□□□□ 0.32
Notch1-201ENSMUST00000028288 Sin3aQ60520 1274 aaKnown RBP17.06■□□□□ 0.32
Notch1-201ENSMUST00000028288 Zfp777B9EKF4 885 aa17.05■□□□□ 0.32
Notch1-201ENSMUST00000028288 Smarca2Q6DIC0 1577 aa17.05■□□□□ 0.32
Notch1-201ENSMUST00000028288 PtmsQ9D0J8 101 aaKnown RBP17.05■□□□□ 0.32
Notch1-201ENSMUST00000028288 Rock2P70336 1388 aa17.05■□□□□ 0.32
Notch1-201ENSMUST00000028288 U2surpQ6NV83 1029 aaKnown RBP17.05■□□□□ 0.32
Notch1-201ENSMUST00000028288 Map4P27546 1125 aaKnown RBP17.04■□□□□ 0.32
Notch1-201ENSMUST00000028288 Zscan21Q07231 555 aa17.03■□□□□ 0.32
Notch1-201ENSMUST00000028288 MsnP26041 577 aaKnown RBP17.02■□□□□ 0.31
Notch1-201ENSMUST00000028288 Trak1Q6PD31 939 aa17.01■□□□□ 0.31
Notch1-201ENSMUST00000028288 Plin1Q8CGN5 517 aa17.01■□□□□ 0.31
Notch1-201ENSMUST00000028288 Gm973E9Q295 1059 aa17.01■□□□□ 0.31
Notch1-201ENSMUST00000028288 Mak16Q8BGS0 296 aaKnown RBP17.01■□□□□ 0.31
Notch1-201ENSMUST00000028288 Rtf1A2AQ19 715 aaKnown RBP17■□□□□ 0.31
Notch1-201ENSMUST00000028288 Mfap1aC0HKD8 439 aaKnown RBP17■□□□□ 0.31
Notch1-201ENSMUST00000028288 Mfap1bC0HKD9 439 aaKnown RBP17■□□□□ 0.31
Notch1-201ENSMUST00000028288 Ipo8Q7TMY7 1010 aa17■□□□□ 0.31
Notch1-201ENSMUST00000028288 Golga2Q921M4 999 aa17■□□□□ 0.31
Notch1-201ENSMUST00000028288 Mphosph9A6H5Y1 991 aa16.99■□□□□ 0.31
Notch1-201ENSMUST00000028288 CntlnA2AM05 1397 aa16.98■□□□□ 0.31
Notch1-201ENSMUST00000028288 Rapgef2Q8CHG7 1496 aa16.98■□□□□ 0.31
Notch1-201ENSMUST00000028288 Tmco5bQ80X59 307 aa16.98■□□□□ 0.31
Notch1-201ENSMUST00000028288 Ecm2Q5FW85 670 aa16.98■□□□□ 0.31
Notch1-201ENSMUST00000028288 Gtf2e1Q9D0D5 440 aa16.98■□□□□ 0.31
Notch1-201ENSMUST00000028288 U2af1Q9D883 239 aaKnown RBP16.98■□□□□ 0.31
Notch1-201ENSMUST00000028288 Calcoco2A2A6M5 331 aa16.97■□□□□ 0.31
Notch1-201ENSMUST00000028288 Anapc15P60007 132 aa16.97■□□□□ 0.31
Notch1-201ENSMUST00000028288 Sart3Q9JLI8 962 aaKnown RBP16.96■□□□□ 0.31
Notch1-201ENSMUST00000028288 MyclP10166 368 aa16.96■□□□□ 0.31
Notch1-201ENSMUST00000028288 Aebp1Q640N1 1128 aa16.96■□□□□ 0.31
Notch1-201ENSMUST00000028288 Stk26Q99JT2 416 aa16.96■□□□□ 0.31
Notch1-201ENSMUST00000028288 AknaQ80VW7 1404 aa16.95■□□□□ 0.3
Notch1-201ENSMUST00000028288 Znf330Q922H9 316 aa16.95■□□□□ 0.3
Notch1-201ENSMUST00000028288 CrbnQ8C7D2 445 aa16.95■□□□□ 0.3
Notch1-201ENSMUST00000028288 Cluap1Q8R3P7 413 aa16.95■□□□□ 0.3
Notch1-201ENSMUST00000028288 ScribQ80U72 1612 aa16.95■□□□□ 0.3
Notch1-201ENSMUST00000028288 Pds5bQ4VA53 1446 aaKnown RBP16.94■□□□□ 0.3
Notch1-201ENSMUST00000028288 Smarca4Q3TKT4 1613 aaKnown RBP16.94■□□□□ 0.3
Notch1-201ENSMUST00000028288 GorabQ8BRM2 368 aa16.93■□□□□ 0.3
Notch1-201ENSMUST00000028288 Smg6P61406 1418 aaKnown RBP16.92■□□□□ 0.3
Notch1-201ENSMUST00000028288 Cald1E9QA15 768 aaKnown RBP16.92■□□□□ 0.3
Notch1-201ENSMUST00000028288 Sycp2Q9CUU3 1500 aa16.91■□□□□ 0.3
Notch1-201ENSMUST00000028288 Nup155Q99P88 1391 aaKnown RBP16.91■□□□□ 0.3
Notch1-201ENSMUST00000028288 Ylpm1Q9R0I7 1386 aaKnown RBP16.9■□□□□ 0.3
Notch1-201ENSMUST00000028288 Iffo2Q8R2V2 512 aa16.9■□□□□ 0.3
Notch1-201ENSMUST00000028288 CgnP59242 1191 aa16.89■□□□□ 0.3
Notch1-201ENSMUST00000028288 Dcaf11Q91VU6 549 aa16.89■□□□□ 0.29
Notch1-201ENSMUST00000028288 Cux1P53564 1515 aa16.89■□□□□ 0.29
Notch1-201ENSMUST00000028288 ChgaP26339 463 aaKnown RBP16.89■□□□□ 0.29
Notch1-201ENSMUST00000028288 Tnnt1O88346 262 aa16.89■□□□□ 0.29
Notch1-201ENSMUST00000028288 Polr1aO35134 1717 aaKnown RBP16.88■□□□□ 0.29
Notch1-201ENSMUST00000028288 Rrp12Q6P5B0 1295 aaKnown RBP16.88■□□□□ 0.29
Notch1-201ENSMUST00000028288 Cabp1Q9JLK7 227 aa16.88■□□□□ 0.29
Notch1-201ENSMUST00000028288 Spag9Q58A65 1321 aaKnown RBP16.87■□□□□ 0.29
Notch1-201ENSMUST00000028288 Usp47Q8BY87 1376 aa16.87■□□□□ 0.29
Notch1-201ENSMUST00000028288 Senp3Q9EP97 568 aaKnown RBP16.87■□□□□ 0.29
Notch1-201ENSMUST00000028288 RdxP26043 583 aaKnown RBP16.87■□□□□ 0.29
Notch1-201ENSMUST00000028288 Tpm3-rs7D3Z2H9 248 aa16.86■□□□□ 0.29
Notch1-201ENSMUST00000028288 Smarce1O54941 411 aaKnown RBP16.86■□□□□ 0.29
Notch1-201ENSMUST00000028288 Pde3bQ61409 1100 aa16.86■□□□□ 0.29
Notch1-201ENSMUST00000028288 Birc3O08863 600 aa16.85■□□□□ 0.29
Notch1-201ENSMUST00000028288 Ksr2Q3UVC0 959 aa16.85■□□□□ 0.29
Notch1-201ENSMUST00000028288 Nolc1E9Q5C9 702 aaKnown RBP16.85■□□□□ 0.29
Notch1-201ENSMUST00000028288 Q3TQI7 289 aaKnown RBP16.84■□□□□ 0.29
Notch1-201ENSMUST00000028288 Ccar1Q8CH18 1146 aaKnown RBP16.84■□□□□ 0.29
Notch1-201ENSMUST00000028288 CftrP26361 1476 aa16.84■□□□□ 0.29
Notch1-201ENSMUST00000028288 SlkO54988 1233 aa16.83■□□□□ 0.28
Notch1-201ENSMUST00000028288 MecomP14404 1042 aa16.83■□□□□ 0.28
Notch1-201ENSMUST00000028288 Nol10Q5RJG1 687 aaKnown RBP16.83■□□□□ 0.28
Notch1-201ENSMUST00000028288 R3hcc1Q8BSI6 488 aa16.83■□□□□ 0.28
Notch1-201ENSMUST00000028288 UacaQ8CGB3 1411 aa16.82■□□□□ 0.28
Notch1-201ENSMUST00000028288 Eif4g2Q62448 906 aaKnown RBP16.81■□□□□ 0.28
Notch1-201ENSMUST00000028288 Dhx57Q6P5D3 1388 aaKnown RBP16.81■□□□□ 0.28
Notch1-201ENSMUST00000028288 Taok2Q6ZQ29 1240 aa16.8■□□□□ 0.28
Notch1-201ENSMUST00000028288 Kiaa0754Q69ZZ9 979 aa16.8■□□□□ 0.28
Notch1-201ENSMUST00000028288 Gpatch11Q3UFS4 262 aa16.8■□□□□ 0.28
Notch1-201ENSMUST00000028288 Srcin1Q9QWI6 1250 aa16.79■□□□□ 0.28
Notch1-201ENSMUST00000028288 Gtf3c3Q3TMP1 882 aa16.79■□□□□ 0.28
Notch1-201ENSMUST00000028288 Ccnb3Q810T2 1396 aa16.79■□□□□ 0.28
Notch1-201ENSMUST00000028288 Rsph3aQ3UFY4 516 aa16.79■□□□□ 0.28
Notch1-201ENSMUST00000028288 Brpf1B2RRD7 1212 aa16.78■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms