RNA–Protein interactions for RNA: ENSMUST00000020258.9

Herc4-201, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Herc4, Length 3,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-201ENSMUST00000020258 Polr3glQ8R0C0 218 aa15.37■□□□□ 0.05
Herc4-201ENSMUST00000020258 Gm13695A2AK44 830 aa15.37■□□□□ 0.05
Herc4-201ENSMUST00000020258 Dbr1Q923B1 550 aa15.37■□□□□ 0.05
Herc4-201ENSMUST00000020258 WrnO09053 1401 aa15.36■□□□□ 0.05
Herc4-201ENSMUST00000020258 UacaQ8CGB3 1411 aa15.36■□□□□ 0.05
Herc4-201ENSMUST00000020258 Map4P27546 1125 aaKnown RBP15.36■□□□□ 0.05
Herc4-201ENSMUST00000020258 Naip2Q9QUK4 1447 aa15.36■□□□□ 0.05
Herc4-201ENSMUST00000020258 B4galnt3Q6L8S8 986 aa15.36■□□□□ 0.05
Herc4-201ENSMUST00000020258 Kdm5bQ80Y84 1544 aa15.36■□□□□ 0.05
Herc4-201ENSMUST00000020258 TnnQ80Z71 1560 aa15.36■□□□□ 0.05
Herc4-201ENSMUST00000020258 PogzQ8BZH4 1409 aaKnown RBP15.35■□□□□ 0.05
Herc4-201ENSMUST00000020258 Ecm2Q5FW85 670 aa15.34■□□□□ 0.05
Herc4-201ENSMUST00000020258 Dhx9O70133 1380 aaKnown RBP15.31■□□□□ 0.04
Herc4-201ENSMUST00000020258 Neurod2Q62414 383 aa15.31■□□□□ 0.04
Herc4-201ENSMUST00000020258 Nlrp6Q91WS2 869 aa15.31■□□□□ 0.04
Herc4-201ENSMUST00000020258 Cwc22Q8C5N3 908 aaKnown RBP15.3■□□□□ 0.04
Herc4-201ENSMUST00000020258 Plekhh2Q8C115 1491 aa15.3■□□□□ 0.04
Herc4-201ENSMUST00000020258 Ifit1bl1D3Z6F0 470 aa15.28■□□□□ 0.04
Herc4-201ENSMUST00000020258 Gm1043A0A140LJC2 1431 aa15.27■□□□□ 0.04
Herc4-201ENSMUST00000020258 Trim26Q99PN3 545 aa15.27■□□□□ 0.04
Herc4-201ENSMUST00000020258 Naip5Q9R016 1403 aa15.27■□□□□ 0.04
Herc4-201ENSMUST00000020258 Tdrd9Q14BI7 1383 aa15.26■□□□□ 0.03
Herc4-201ENSMUST00000020258 Dapk1Q80YE7 1442 aa15.26■□□□□ 0.03
Herc4-201ENSMUST00000020258 Mroh3A0A1D5RM54 893 aa15.25■□□□□ 0.03
Herc4-201ENSMUST00000020258 CadpsQ80TJ1 1355 aa15.25■□□□□ 0.03
Herc4-201ENSMUST00000020258 ChgaP26339 463 aaKnown RBP15.24■□□□□ 0.03
Herc4-201ENSMUST00000020258 EprsQ8CGC7 1512 aaKnown RBP15.23■□□□□ 0.03
Herc4-201ENSMUST00000020258 Cnga1P29974 684 aa15.23■□□□□ 0.03
Herc4-201ENSMUST00000020258 Q7TT23 1179 aa15.23■□□□□ 0.03
Herc4-201ENSMUST00000020258 Rpgrip1lQ8CG73 1264 aa15.23■□□□□ 0.03
Herc4-201ENSMUST00000020258 Urb2E9Q7L1 1524 aaKnown RBP15.23■□□□□ 0.03
Herc4-201ENSMUST00000020258 Ttll5Q8CHB8 1328 aa15.22■□□□□ 0.03
Herc4-201ENSMUST00000020258 Ift140E9PY46 1464 aa15.22■□□□□ 0.03
Herc4-201ENSMUST00000020258 Nup155Q99P88 1391 aaKnown RBP15.22■□□□□ 0.03
Herc4-201ENSMUST00000020258 CrbnQ8C7D2 445 aa15.22■□□□□ 0.03
Herc4-201ENSMUST00000020258 Ncoa2Q61026 1462 aa15.21■□□□□ 0.03
Herc4-201ENSMUST00000020258 PnisrA2AJT4 805 aaKnown RBP15.19■□□□□ 0.02
Herc4-201ENSMUST00000020258 NexmifQ5DTT1 1515 aa15.19■□□□□ 0.02
Herc4-201ENSMUST00000020258 Washc2Q6PGL7 1334 aa15.18■□□□□ 0.02
Herc4-201ENSMUST00000020258 CanxP35564 591 aaKnown RBP15.18■□□□□ 0.02
Herc4-201ENSMUST00000020258 L3mbtl2P59178 703 aa15.18■□□□□ 0.02
Herc4-201ENSMUST00000020258 Atp1b4Q99ME6 356 aa15.18■□□□□ 0.02
Herc4-201ENSMUST00000020258 Armcx1Q9CX83 456 aa15.18■□□□□ 0.02
Herc4-201ENSMUST00000020258 Inpp5dQ9ES52 1191 aa15.18■□□□□ 0.02
Herc4-201ENSMUST00000020258 Zscan21Q07231 555 aa15.18■□□□□ 0.02
Herc4-201ENSMUST00000020258 Stk24Q99KH8 431 aa15.18■□□□□ 0.02
Herc4-201ENSMUST00000020258 Cc2d2bA0A286YDU8 1405 aa15.17■□□□□ 0.02
Herc4-201ENSMUST00000020258 SynmQ70IV5 1561 aa15.17■□□□□ 0.02
Herc4-201ENSMUST00000020258 Tcerg1Q8CGF7 1100 aaKnown RBP15.17■□□□□ 0.02
Herc4-201ENSMUST00000020258 Dnajc5bQ9CQ94 199 aa15.17■□□□□ 0.02
Herc4-201ENSMUST00000020258 AknaQ80VW7 1404 aa15.16■□□□□ 0.02
Herc4-201ENSMUST00000020258 Pank3Q8R2W9 370 aa15.16■□□□□ 0.02
Herc4-201ENSMUST00000020258 Esx1O88933 382 aa15.16■□□□□ 0.02
Herc4-201ENSMUST00000020258 Samd9lQ69Z37 1561 aa15.16■□□□□ 0.02
Herc4-201ENSMUST00000020258 Abcc5Q9R1X5 1436 aa15.15■□□□□ 0.02
Herc4-201ENSMUST00000020258 PrkcshO08795 521 aa15.15■□□□□ 0.02
Herc4-201ENSMUST00000020258 4930567H17RikQ3V0K5 233 aa15.14■□□□□ 0.01
Herc4-201ENSMUST00000020258 Clstn2Q9ER65 966 aa15.14■□□□□ 0.01
Herc4-201ENSMUST00000020258 Gpatch8A2A6A1 1505 aa15.14■□□□□ 0.01
Herc4-201ENSMUST00000020258 Slc4a1apE9PX68 744 aa15.13■□□□□ 0.01
Herc4-201ENSMUST00000020258 Mak16Q8BGS0 296 aaKnown RBP15.13■□□□□ 0.01
Herc4-201ENSMUST00000020258 Sart1Q9Z315 806 aaKnown RBP15.13■□□□□ 0.01
Herc4-201ENSMUST00000020258 Trim30dE9PWL0 497 aa15.12■□□□□ 0.01
Herc4-201ENSMUST00000020258 Thoc2B1AZI6 1594 aaKnown RBP15.12■□□□□ 0.01
Herc4-201ENSMUST00000020258 Plb1Q3TTY0 1478 aa15.12■□□□□ 0.01
Herc4-201ENSMUST00000020258 BC005561E9Q5E2 1589 aa15.11■□□□□ 0.01
Herc4-201ENSMUST00000020258 Ccdc27Q3V036 639 aa15.11■□□□□ 0.01
Herc4-201ENSMUST00000020258 Erich3F6QRE9 1637 aa15.11■□□□□ 0.01
Herc4-201ENSMUST00000020258 Gm20521D3Z5F7 333 aa15.1■□□□□ 0.01
Herc4-201ENSMUST00000020258 Polr1aO35134 1717 aaKnown RBP15.1■□□□□ 0.01
Herc4-201ENSMUST00000020258 Liat1Q810M6 228 aa15.09■□□□□ 0.01
Herc4-201ENSMUST00000020258 Upf2A2AT37 1269 aaKnown RBP15.09■□□□□ 0.01
Herc4-201ENSMUST00000020258 Zfp444Q3TDV8 331 aaKnown RBP15.08■□□□□ 0.01
Herc4-201ENSMUST00000020258 Ncoa1P70365 1447 aa15.08■□□□□ 0
Herc4-201ENSMUST00000020258 Speer4f1Q9D5Q6 258 aa15.08■□□□□ 0
Herc4-201ENSMUST00000020258 Arhgap31A6X8Z5 1425 aa15.07■□□□□ 0
Herc4-201ENSMUST00000020258 Lmo7E9PYF4 1699 aaKnown RBP15.07■□□□□ 0
Herc4-201ENSMUST00000020258 Arid3cA6PWV5 409 aa15.07■□□□□ 0
Herc4-201ENSMUST00000020258 Ncoa3O09000 1398 aa15.07■□□□□ 0
Herc4-201ENSMUST00000020258 Mug1P28665 1476 aa15.06■□□□□ 0
Herc4-201ENSMUST00000020258 Senp3Q9EP97 568 aaKnown RBP15.06■□□□□ 0
Herc4-201ENSMUST00000020258 Hsp90aa1P07901 733 aaKnown RBP15.05■□□□□ 0
Herc4-201ENSMUST00000020258 Arid4bA2CG63 1314 aaKnown RBP15.05■□□□□ 0
Herc4-201ENSMUST00000020258 Ipo9Q91YE6 1041 aa15.04■□□□□ -0
Herc4-201ENSMUST00000020258 Rock2P70336 1388 aa15.04■□□□□ -0
Herc4-201ENSMUST00000020258 Dcaf11Q91VU6 549 aa15.03■□□□□ -0
Herc4-201ENSMUST00000020258 Chmp5Q9D7S9 219 aa15.02■□□□□ -0
Herc4-201ENSMUST00000020258 Grin2aP35436 1464 aa15.02■□□□□ -0
Herc4-201ENSMUST00000020258 PxdnQ3UQ28 1475 aa15.02■□□□□ -0
Herc4-201ENSMUST00000020258 Rprd2Q6NXI6 1469 aaKnown RBP15.01□□□□□ -0.01
Herc4-201ENSMUST00000020258 Srcin1Q9QWI6 1250 aa15.01□□□□□ -0.01
Herc4-201ENSMUST00000020258 Spryd3E9Q9B3 442 aa15.01□□□□□ -0.01
Herc4-201ENSMUST00000020258 Srpk2O54781 681 aaKnown RBP15.01□□□□□ -0.01
Herc4-201ENSMUST00000020258 Crocc2F6XLV1 1638 aa15.01□□□□□ -0.01
Herc4-201ENSMUST00000020258 Pla2r1Q62028 1487 aa15□□□□□ -0.01
Herc4-201ENSMUST00000020258 Tmf1B9EKI3 1091 aa14.99□□□□□ -0.01
Herc4-201ENSMUST00000020258 Fan1Q69ZT1 1020 aa14.99□□□□□ -0.01
Herc4-201ENSMUST00000020258 Rwdd1Q9CQK7 243 aa14.99□□□□□ -0.01
Herc4-201ENSMUST00000020258 Unc13aQ4KUS2 1712 aa14.99□□□□□ -0.01
Herc4-201ENSMUST00000020258 Arhgef40Q3UPH7 1517 aa14.98□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms