RNA–Protein interactions for RNA: ENSMUST00000020163.6

Nedd1-201, Transcript of Protein NEDD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nedd1, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1-201ENSMUST00000020163 Urb2E9Q7L1 1524 aaKnown RBP13.44□□□□□ -0.26
Nedd1-201ENSMUST00000020163 Iqcf3Q9D498 203 aa13.43□□□□□ -0.26
Nedd1-201ENSMUST00000020163 Mink1Q9JM52 1308 aa13.43□□□□□ -0.26
Nedd1-201ENSMUST00000020163 Plcd4Q8K3R3 807 aa13.43□□□□□ -0.26
Nedd1-201ENSMUST00000020163 Slc4a3P16283 1227 aa13.42□□□□□ -0.26
Nedd1-201ENSMUST00000020163 Carmil1Q6EDY6 1374 aa13.42□□□□□ -0.26
Nedd1-201ENSMUST00000020163 Npm1Q61937 292 aaKnown RBP13.4□□□□□ -0.26
Nedd1-201ENSMUST00000020163 Lrriq1Q0P5X1 1673 aa13.4□□□□□ -0.26
Nedd1-201ENSMUST00000020163 SynmQ70IV5 1561 aa13.4□□□□□ -0.26
Nedd1-201ENSMUST00000020163 Arhgap27A2AB59 869 aa13.38□□□□□ -0.27
Nedd1-201ENSMUST00000020163 L3mbtl2P59178 703 aa13.37□□□□□ -0.27
Nedd1-201ENSMUST00000020163 Ofd1Q80Z25 1017 aa13.36□□□□□ -0.27
Nedd1-201ENSMUST00000020163 Ipo4Q8VI75 1082 aa13.35□□□□□ -0.27
Nedd1-201ENSMUST00000020163 Kif21aQ9QXL2 1672 aa13.35□□□□□ -0.27
Nedd1-201ENSMUST00000020163 Lmtk2Q3TYD6 1471 aa13.35□□□□□ -0.27
Nedd1-201ENSMUST00000020163 Rprd2Q6NXI6 1469 aaKnown RBP13.35□□□□□ -0.27
Nedd1-201ENSMUST00000020163 Mphosph9A6H5Y1 991 aa13.34□□□□□ -0.27
Nedd1-201ENSMUST00000020163 Kcnh8P59111 1102 aa13.34□□□□□ -0.27
Nedd1-201ENSMUST00000020163 Plekhg5Q66T02 1073 aa13.33□□□□□ -0.28
Nedd1-201ENSMUST00000020163 Arhgef12Q8R4H2 1543 aaKnown RBP13.32□□□□□ -0.28
Nedd1-201ENSMUST00000020163 Dnajc5P60904 198 aa13.32□□□□□ -0.28
Nedd1-201ENSMUST00000020163 Rfx7F8VPJ6 1459 aa13.32□□□□□ -0.28
Nedd1-201ENSMUST00000020163 Kank1E9Q238 1360 aa13.32□□□□□ -0.28
Nedd1-201ENSMUST00000020163 Aebp1Q640N1 1128 aa13.31□□□□□ -0.28
Nedd1-201ENSMUST00000020163 Ube2uB1AUC4 352 aa13.31□□□□□ -0.28
Nedd1-201ENSMUST00000020163 Abca5Q8K448 1642 aa13.31□□□□□ -0.28
Nedd1-201ENSMUST00000020163 Usp47Q8BY87 1376 aa13.31□□□□□ -0.28
Nedd1-201ENSMUST00000020163 Mug1P28665 1476 aa13.3□□□□□ -0.28
Nedd1-201ENSMUST00000020163 TnikP83510 1323 aa13.3□□□□□ -0.28
Nedd1-201ENSMUST00000020163 Pknox2Q8BG99 474 aa13.29□□□□□ -0.28
Nedd1-201ENSMUST00000020163 Ccnb3Q810T2 1396 aa13.29□□□□□ -0.28
Nedd1-201ENSMUST00000020163 Polr1aO35134 1717 aaKnown RBP13.29□□□□□ -0.28
Nedd1-201ENSMUST00000020163 Gcc2Q8CHG3 1679 aa13.28□□□□□ -0.28
Nedd1-201ENSMUST00000020163 Myom3A2ABU4 1439 aa13.27□□□□□ -0.29
Nedd1-201ENSMUST00000020163 Cwc22Q8C5N3 908 aaKnown RBP13.26□□□□□ -0.29
Nedd1-201ENSMUST00000020163 Chic2Q9D9G3 165 aa13.26□□□□□ -0.29
Nedd1-201ENSMUST00000020163 Prkrip1Q9CWV6 186 aaKnown RBP13.26□□□□□ -0.29
Nedd1-201ENSMUST00000020163 ChgaP26339 463 aaKnown RBP13.26□□□□□ -0.29
Nedd1-201ENSMUST00000020163 4933416C03RikQ3V063 378 aa13.26□□□□□ -0.29
Nedd1-201ENSMUST00000020163 Pik3c2gO70167 1506 aa13.25□□□□□ -0.29
Nedd1-201ENSMUST00000020163 Erbb3Q61526 1339 aa13.25□□□□□ -0.29
Nedd1-201ENSMUST00000020163 Eif4g3Q80XI3 1579 aaKnown RBP13.25□□□□□ -0.29
Nedd1-201ENSMUST00000020163 DaxxO35613 739 aa13.24□□□□□ -0.29
Nedd1-201ENSMUST00000020163 Lamc1P02468 1607 aaKnown RBP13.24□□□□□ -0.29
Nedd1-201ENSMUST00000020163 Mbd5B1AYB6 1498 aa13.23□□□□□ -0.29
Nedd1-201ENSMUST00000020163 Kif21bQ9QXL1 1668 aa13.22□□□□□ -0.29
Nedd1-201ENSMUST00000020163 Pkd2O35245 966 aa13.22□□□□□ -0.29
Nedd1-201ENSMUST00000020163 Nkx1-2P42580 305 aa13.22□□□□□ -0.29
Nedd1-201ENSMUST00000020163 Rock2P70336 1388 aa13.21□□□□□ -0.29
Nedd1-201ENSMUST00000020163 Ift140E9PY46 1464 aa13.21□□□□□ -0.3
Nedd1-201ENSMUST00000020163 LrpprcQ6PB66 1392 aaKnown RBP13.2□□□□□ -0.3
Nedd1-201ENSMUST00000020163 Naip6Q9JIB6 1403 aa13.2□□□□□ -0.3
Nedd1-201ENSMUST00000020163 Kcnn1Q9EQR3 537 aa13.18□□□□□ -0.3
Nedd1-201ENSMUST00000020163 NeflP08551 543 aa13.18□□□□□ -0.3
Nedd1-201ENSMUST00000020163 Shroom2A2ALU4 1481 aa13.17□□□□□ -0.3
Nedd1-201ENSMUST00000020163 Plb1Q3TTY0 1478 aa13.17□□□□□ -0.3
Nedd1-201ENSMUST00000020163 Ttll13A4Q9F6 804 aa13.17□□□□□ -0.3
Nedd1-201ENSMUST00000020163 Pdlim2Q8R1G6 349 aa13.17□□□□□ -0.3
Nedd1-201ENSMUST00000020163 Dapk1Q80YE7 1442 aa13.17□□□□□ -0.3
Nedd1-201ENSMUST00000020163 Mre11Q61216 706 aa13.16□□□□□ -0.3
Nedd1-201ENSMUST00000020163 NexmifQ5DTT1 1515 aa13.15□□□□□ -0.3
Nedd1-201ENSMUST00000020163 Anp32bQ9EST5 272 aaKnown RBP13.14□□□□□ -0.31
Nedd1-201ENSMUST00000020163 Duox2A2AQ99 1517 aa13.14□□□□□ -0.31
Nedd1-201ENSMUST00000020163 CanxP35564 591 aaKnown RBP13.13□□□□□ -0.31
Nedd1-201ENSMUST00000020163 PogzQ8BZH4 1409 aaKnown RBP13.13□□□□□ -0.31
Nedd1-201ENSMUST00000020163 Mug2P28666 1451 aa13.13□□□□□ -0.31
Nedd1-201ENSMUST00000020163 Zfp444Q3TDV8 331 aaKnown RBP13.13□□□□□ -0.31
Nedd1-201ENSMUST00000020163 Pdcl3Q8BVF2 240 aa13.13□□□□□ -0.31
Nedd1-201ENSMUST00000020163 Sart3Q9JLI8 962 aaKnown RBP13.12□□□□□ -0.31
Nedd1-201ENSMUST00000020163 Kif14L0N7N1 1674 aaKnown RBP13.12□□□□□ -0.31
Nedd1-201ENSMUST00000020163 Mbd3Q9Z2D8 285 aaKnown RBP13.12□□□□□ -0.31
Nedd1-201ENSMUST00000020163 Map3k4O08648 1597 aa13.11□□□□□ -0.31
Nedd1-201ENSMUST00000020163 Zfp644E9QA22 1323 aa13.1□□□□□ -0.31
Nedd1-201ENSMUST00000020163 Zmym3Q9JLM4 1370 aa13.1□□□□□ -0.31
Nedd1-201ENSMUST00000020163 Abcc5Q9R1X5 1436 aa13.1□□□□□ -0.31
Nedd1-201ENSMUST00000020163 Gpatch8A2A6A1 1505 aa13.1□□□□□ -0.31
Nedd1-201ENSMUST00000020163 Cabp1Q9JLK7 227 aa13.1□□□□□ -0.31
Nedd1-201ENSMUST00000020163 BC005561E9Q5E2 1589 aa13.1□□□□□ -0.31
Nedd1-201ENSMUST00000020163 Mtus2Q3UHD3 1353 aa13.1□□□□□ -0.31
Nedd1-201ENSMUST00000020163 Zmym4A2A791 1549 aaKnown RBP13.09□□□□□ -0.31
Nedd1-201ENSMUST00000020163 Dnai1Q8C0M8 701 aa13.09□□□□□ -0.31
Nedd1-201ENSMUST00000020163 Samd9lQ69Z37 1561 aa13.09□□□□□ -0.31
Nedd1-201ENSMUST00000020163 Ttc41Q692V3 1318 aa13.09□□□□□ -0.31
Nedd1-201ENSMUST00000020163 Rundc1Q0VDN7 615 aa13.09□□□□□ -0.31
Nedd1-201ENSMUST00000020163 Mak16Q8BGS0 296 aaKnown RBP13.09□□□□□ -0.31
Nedd1-201ENSMUST00000020163 Ak9G3UYQ4 1894 aa13.09□□□□□ -0.31
Nedd1-201ENSMUST00000020163 Plekhh2Q8C115 1491 aa13.08□□□□□ -0.32
Nedd1-201ENSMUST00000020163 Dhx57Q6P5D3 1388 aaKnown RBP13.07□□□□□ -0.32
Nedd1-201ENSMUST00000020163 Kdm2bQ6P1G2 1309 aa13.07□□□□□ -0.32
Nedd1-201ENSMUST00000020163 Zscan21Q07231 555 aa13.07□□□□□ -0.32
Nedd1-201ENSMUST00000020163 RalgapbQ8BQZ4 1484 aa13.07□□□□□ -0.32
Nedd1-201ENSMUST00000020163 DroshaQ5HZJ0 1373 aaKnown RBP13.07□□□□□ -0.32
Nedd1-201ENSMUST00000020163 Kif27Q7M6Z4 1394 aa13.07□□□□□ -0.32
Nedd1-201ENSMUST00000020163 SphkapQ6NSW3 1687 aa13.06□□□□□ -0.32
Nedd1-201ENSMUST00000020163 Ppm1gQ61074 542 aa13.06□□□□□ -0.32
Nedd1-201ENSMUST00000020163 Rpgrip1lQ8CG73 1264 aa13.06□□□□□ -0.32
Nedd1-201ENSMUST00000020163 Card11Q8CIS0 1159 aa13.06□□□□□ -0.32
Nedd1-201ENSMUST00000020163 Tubgcp6G5E8P0 1769 aa13.06□□□□□ -0.32
Nedd1-201ENSMUST00000020163 NudcO35685 332 aaKnown RBP13.06□□□□□ -0.32
Nedd1-201ENSMUST00000020163 Gtf2a1Q99PM3 378 aa13.06□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 128.9 ms