RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Card11Q8CIS0 1159 aa13.88□□□□□ -0.19
Clip3-201ENSMUST00000014065 PnisrA2AJT4 805 aaKnown RBP13.87□□□□□ -0.19
Clip3-201ENSMUST00000014065 PogzQ8BZH4 1409 aaKnown RBP13.86□□□□□ -0.19
Clip3-201ENSMUST00000014065 Ccdc27Q3V036 639 aa13.85□□□□□ -0.19
Clip3-201ENSMUST00000014065 Trak1Q6PD31 939 aa13.85□□□□□ -0.19
Clip3-201ENSMUST00000014065 Crocc2F6XLV1 1638 aa13.85□□□□□ -0.19
Clip3-201ENSMUST00000014065 Fkbp15Q6P9Q6 1216 aaKnown RBP13.84□□□□□ -0.19
Clip3-201ENSMUST00000014065 4933416C03RikQ3V063 378 aa13.84□□□□□ -0.19
Clip3-201ENSMUST00000014065 Ncoa1P70365 1447 aa13.83□□□□□ -0.2
Clip3-201ENSMUST00000014065 L3mbtl2P59178 703 aa13.83□□□□□ -0.2
Clip3-201ENSMUST00000014065 Arhgap27A2AB59 869 aa13.82□□□□□ -0.2
Clip3-201ENSMUST00000014065 Anp32bQ9EST5 272 aaKnown RBP13.82□□□□□ -0.2
Clip3-201ENSMUST00000014065 Mtus2Q3UHD3 1353 aa13.82□□□□□ -0.2
Clip3-201ENSMUST00000014065 Cwc22Q8C5N3 908 aaKnown RBP13.82□□□□□ -0.2
Clip3-201ENSMUST00000014065 Tcerg1Q8CGF7 1100 aaKnown RBP13.82□□□□□ -0.2
Clip3-201ENSMUST00000014065 Camsap2Q8C1B1 1461 aa13.82□□□□□ -0.2
Clip3-201ENSMUST00000014065 DaxxO35613 739 aa13.81□□□□□ -0.2
Clip3-201ENSMUST00000014065 Dennd4bQ3U1Y4 1499 aa13.81□□□□□ -0.2
Clip3-201ENSMUST00000014065 Amer1Q7TS75 1132 aa13.8□□□□□ -0.2
Clip3-201ENSMUST00000014065 Egfem1Q8C088 590 aa13.8□□□□□ -0.2
Clip3-201ENSMUST00000014065 Ift140E9PY46 1464 aa13.79□□□□□ -0.2
Clip3-201ENSMUST00000014065 ChgaP26339 463 aaKnown RBP13.79□□□□□ -0.2
Clip3-201ENSMUST00000014065 Dapk1Q80YE7 1442 aa13.78□□□□□ -0.2
Clip3-201ENSMUST00000014065 Upf2A2AT37 1269 aaKnown RBP13.78□□□□□ -0.2
Clip3-201ENSMUST00000014065 Ipo9Q91YE6 1041 aa13.78□□□□□ -0.2
Clip3-201ENSMUST00000014065 SynmQ70IV5 1561 aa13.78□□□□□ -0.2
Clip3-201ENSMUST00000014065 Dhx9O70133 1380 aaKnown RBP13.77□□□□□ -0.2
Clip3-201ENSMUST00000014065 Peg3Q3URU2 1571 aa13.77□□□□□ -0.21
Clip3-201ENSMUST00000014065 Plekhh2Q8C115 1491 aa13.77□□□□□ -0.21
Clip3-201ENSMUST00000014065 Samd9lQ69Z37 1561 aa13.77□□□□□ -0.21
Clip3-201ENSMUST00000014065 NexmifQ5DTT1 1515 aa13.76□□□□□ -0.21
Clip3-201ENSMUST00000014065 B4galnt3Q6L8S8 986 aa13.75□□□□□ -0.21
Clip3-201ENSMUST00000014065 EprsQ8CGC7 1512 aaKnown RBP13.75□□□□□ -0.21
Clip3-201ENSMUST00000014065 CadpsQ80TJ1 1355 aa13.75□□□□□ -0.21
Clip3-201ENSMUST00000014065 Polr1aO35134 1717 aaKnown RBP13.75□□□□□ -0.21
Clip3-201ENSMUST00000014065 Mug1P28665 1476 aa13.73□□□□□ -0.21
Clip3-201ENSMUST00000014065 Hsp90aa1P07901 733 aaKnown RBP13.73□□□□□ -0.21
Clip3-201ENSMUST00000014065 Rpgrip1lQ8CG73 1264 aa13.73□□□□□ -0.21
Clip3-201ENSMUST00000014065 Gpatch8A2A6A1 1505 aa13.73□□□□□ -0.21
Clip3-201ENSMUST00000014065 Abcc5Q9R1X5 1436 aa13.73□□□□□ -0.21
Clip3-201ENSMUST00000014065 Rprd2Q6NXI6 1469 aaKnown RBP13.73□□□□□ -0.21
Clip3-201ENSMUST00000014065 Dbr1Q923B1 550 aa13.72□□□□□ -0.21
Clip3-201ENSMUST00000014065 Kif21aQ9QXL2 1672 aa13.72□□□□□ -0.21
Clip3-201ENSMUST00000014065 Hdac5Q9Z2V6 1113 aa13.72□□□□□ -0.21
Clip3-201ENSMUST00000014065 WrnO09053 1401 aa13.72□□□□□ -0.21
Clip3-201ENSMUST00000014065 BC005561E9Q5E2 1589 aa13.71□□□□□ -0.21
Clip3-201ENSMUST00000014065 Apbb1Q9QXJ1 710 aa13.71□□□□□ -0.21
Clip3-201ENSMUST00000014065 Prdm10Q3UTQ7 1184 aa13.7□□□□□ -0.22
Clip3-201ENSMUST00000014065 Pprc1Q6NZN1 1644 aa13.7□□□□□ -0.22
Clip3-201ENSMUST00000014065 Q7TT23 1179 aa13.7□□□□□ -0.22
Clip3-201ENSMUST00000014065 Ttll5Q8CHB8 1328 aa13.7□□□□□ -0.22
Clip3-201ENSMUST00000014065 Zscan21Q07231 555 aa13.68□□□□□ -0.22
Clip3-201ENSMUST00000014065 Map4P27546 1125 aaKnown RBP13.68□□□□□ -0.22
Clip3-201ENSMUST00000014065 Plekhg5Q66T02 1073 aa13.68□□□□□ -0.22
Clip3-201ENSMUST00000014065 ArxO35085 564 aa13.67□□□□□ -0.22
Clip3-201ENSMUST00000014065 CanxP35564 591 aaKnown RBP13.67□□□□□ -0.22
Clip3-201ENSMUST00000014065 Cul7Q8VE73 1689 aa13.66□□□□□ -0.22
Clip3-201ENSMUST00000014065 Lmtk2Q3TYD6 1471 aa13.66□□□□□ -0.22
Clip3-201ENSMUST00000014065 Zfp444Q3TDV8 331 aaKnown RBP13.66□□□□□ -0.22
Clip3-201ENSMUST00000014065 Mak16Q8BGS0 296 aaKnown RBP13.65□□□□□ -0.22
Clip3-201ENSMUST00000014065 Erich6D3Z6S9 713 aa13.64□□□□□ -0.23
Clip3-201ENSMUST00000014065 Nup155Q99P88 1391 aaKnown RBP13.63□□□□□ -0.23
Clip3-201ENSMUST00000014065 Os9Q8K2C7 672 aa13.63□□□□□ -0.23
Clip3-201ENSMUST00000014065 Ncoa3O09000 1398 aa13.62□□□□□ -0.23
Clip3-201ENSMUST00000014065 CrbnQ8C7D2 445 aa13.62□□□□□ -0.23
Clip3-201ENSMUST00000014065 Setd1bQ8CFT2 1985 aa13.62□□□□□ -0.23
Clip3-201ENSMUST00000014065 Rrp7aQ9D1C9 280 aaKnown RBP13.61□□□□□ -0.23
Clip3-201ENSMUST00000014065 Erbb3Q61526 1339 aa13.61□□□□□ -0.23
Clip3-201ENSMUST00000014065 Tdrd9Q14BI7 1383 aa13.61□□□□□ -0.23
Clip3-201ENSMUST00000014065 Arhgef40Q3UPH7 1517 aa13.61□□□□□ -0.23
Clip3-201ENSMUST00000014065 Abca5Q8K448 1642 aa13.61□□□□□ -0.23
Clip3-201ENSMUST00000014065 Dhx57Q6P5D3 1388 aaKnown RBP13.61□□□□□ -0.23
Clip3-201ENSMUST00000014065 Rfx7F8VPJ6 1459 aa13.61□□□□□ -0.23
Clip3-201ENSMUST00000014065 Esx1O88933 382 aa13.61□□□□□ -0.23
Clip3-201ENSMUST00000014065 Pla2r1Q62028 1487 aa13.6□□□□□ -0.23
Clip3-201ENSMUST00000014065 Pik3c2gO70167 1506 aa13.6□□□□□ -0.23
Clip3-201ENSMUST00000014065 Inpp5dQ9ES52 1191 aa13.6□□□□□ -0.23
Clip3-201ENSMUST00000014065 Pank3Q8R2W9 370 aa13.59□□□□□ -0.23
Clip3-201ENSMUST00000014065 Iqcf3Q9D498 203 aa13.59□□□□□ -0.23
Clip3-201ENSMUST00000014065 Cc2d2bA0A286YDU8 1405 aa13.59□□□□□ -0.23
Clip3-201ENSMUST00000014065 Mrc2Q64449 1479 aa13.59□□□□□ -0.23
Clip3-201ENSMUST00000014065 Ifit1bl1D3Z6F0 470 aa13.59□□□□□ -0.23
Clip3-201ENSMUST00000014065 Neurod2Q62414 383 aa13.59□□□□□ -0.23
Clip3-201ENSMUST00000014065 Adgrb2Q8CGM1 1561 aa13.59□□□□□ -0.23
Clip3-201ENSMUST00000014065 Ttll13A4Q9F6 804 aa13.59□□□□□ -0.23
Clip3-201ENSMUST00000014065 Kdm2aP59997 1161 aa13.58□□□□□ -0.24
Clip3-201ENSMUST00000014065 Irx3P81067 507 aa13.57□□□□□ -0.24
Clip3-201ENSMUST00000014065 Gtf3c3Q3TMP1 882 aa13.57□□□□□ -0.24
Clip3-201ENSMUST00000014065 Magi3Q9EQJ9 1476 aa13.56□□□□□ -0.24
Clip3-201ENSMUST00000014065 Mug2P28666 1451 aa13.55□□□□□ -0.24
Clip3-201ENSMUST00000014065 Grin2aP35436 1464 aa13.55□□□□□ -0.24
Clip3-201ENSMUST00000014065 WizO88286 1684 aaKnown RBP13.55□□□□□ -0.24
Clip3-201ENSMUST00000014065 Prkrip1Q9CWV6 186 aaKnown RBP13.54□□□□□ -0.24
Clip3-201ENSMUST00000014065 Fhod3Q76LL6 1578 aa13.54□□□□□ -0.24
Clip3-201ENSMUST00000014065 Trim30dE9PWL0 497 aa13.54□□□□□ -0.24
Clip3-201ENSMUST00000014065 Chmp5Q9D7S9 219 aa13.54□□□□□ -0.24
Clip3-201ENSMUST00000014065 Myom3A2ABU4 1439 aa13.54□□□□□ -0.24
Clip3-201ENSMUST00000014065 PxdnQ3UQ28 1475 aa13.54□□□□□ -0.24
Clip3-201ENSMUST00000014065 Nlrp6Q91WS2 869 aa13.54□□□□□ -0.24
Clip3-201ENSMUST00000014065 Adamts12Q811B3 1600 aa13.53□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 6.3 ms