RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Plekhh2Q8C115 1491 aa26.13■■□□□ 1.77
Shkbp1-201ENSMUST00000003857 Ncoa3O09000 1398 aa26.1■■□□□ 1.77
Shkbp1-201ENSMUST00000003857 Arhgef40Q3UPH7 1517 aa26.1■■□□□ 1.77
Shkbp1-201ENSMUST00000003857 Lamc1P02468 1607 aaKnown RBP26.1■■□□□ 1.77
Shkbp1-201ENSMUST00000003857 Kif21bQ9QXL1 1668 aa26.09■■□□□ 1.77
Shkbp1-201ENSMUST00000003857 Ncoa1P70365 1447 aa26.09■■□□□ 1.77
Shkbp1-201ENSMUST00000003857 Kdm6bQ5NCY0 1641 aa26.09■■□□□ 1.77
Shkbp1-201ENSMUST00000003857 Usp47Q8BY87 1376 aa26.08■■□□□ 1.77
Shkbp1-201ENSMUST00000003857 WrnO09053 1401 aa26.08■■□□□ 1.77
Shkbp1-201ENSMUST00000003857 Pbrm1Q8BSQ9 1634 aaKnown RBP26.07■■□□□ 1.76
Shkbp1-201ENSMUST00000003857 Cdc42bpaQ3UU96 1719 aa26.07■■□□□ 1.76
Shkbp1-201ENSMUST00000003857 SphkapQ6NSW3 1687 aa26.07■■□□□ 1.76
Shkbp1-201ENSMUST00000003857 Fam71e1A1L3C1 212 aa26.04■■□□□ 1.76
Shkbp1-201ENSMUST00000003857 Pkd2O35245 966 aa26.04■■□□□ 1.76
Shkbp1-201ENSMUST00000003857 Arhgef11Q68FM7 1552 aa26.04■■□□□ 1.76
Shkbp1-201ENSMUST00000003857 Zfp644E9QA22 1323 aa26.03■■□□□ 1.76
Shkbp1-201ENSMUST00000003857 Adcy10Q8C0T9 1614 aa26.02■■□□□ 1.76
Shkbp1-201ENSMUST00000003857 Nup160Q9Z0W3 1402 aaKnown RBP26.01■■□□□ 1.76
Shkbp1-201ENSMUST00000003857 Pik3c2gO70167 1506 aa26.01■■□□□ 1.76
Shkbp1-201ENSMUST00000003857 Kdm3bQ6ZPY7 1562 aa26.01■■□□□ 1.76
Shkbp1-201ENSMUST00000003857 Calr4Q3TQS0 420 aa25.99■■□□□ 1.75
Shkbp1-201ENSMUST00000003857 Kiaa1551Q5DTW7 1521 aa25.97■■□□□ 1.75
Shkbp1-201ENSMUST00000003857 Anp32aO35381 247 aa25.97■■□□□ 1.75
Shkbp1-201ENSMUST00000003857 Mtus2Q3UHD3 1353 aa25.97■■□□□ 1.75
Shkbp1-201ENSMUST00000003857 Il16O54824 1322 aa25.95■■□□□ 1.75
Shkbp1-201ENSMUST00000003857 AlkP97793 1621 aa25.95■■□□□ 1.74
Shkbp1-201ENSMUST00000003857 Abcc2Q8VI47 1543 aa25.93■■□□□ 1.74
Shkbp1-201ENSMUST00000003857 Shroom2A2ALU4 1481 aa25.92■■□□□ 1.74
Shkbp1-201ENSMUST00000003857 Adgrb2Q8CGM1 1561 aa25.91■■□□□ 1.74
Shkbp1-201ENSMUST00000003857 Slc24a1Q91WD8 1130 aa25.9■■□□□ 1.74
Shkbp1-201ENSMUST00000003857 Arhgef12Q8R4H2 1543 aaKnown RBP25.88■■□□□ 1.73
Shkbp1-201ENSMUST00000003857 Gm13695A2AK44 830 aa25.88■■□□□ 1.73
Shkbp1-201ENSMUST00000003857 Mbd5B1AYB6 1498 aa25.85■■□□□ 1.73
Shkbp1-201ENSMUST00000003857 Kif14L0N7N1 1674 aaKnown RBP25.85■■□□□ 1.73
Shkbp1-201ENSMUST00000003857 Mrs2Q5NCE8 434 aa25.84■■□□□ 1.73
Shkbp1-201ENSMUST00000003857 Supt6hQ62383 1726 aaKnown RBP25.84■■□□□ 1.73
Shkbp1-201ENSMUST00000003857 Arhgap27A2AB59 869 aa25.82■■□□□ 1.72
Shkbp1-201ENSMUST00000003857 Cc2d2bA0A286YDU8 1405 aa25.82■■□□□ 1.72
Shkbp1-201ENSMUST00000003857 Map3k4O08648 1597 aa25.81■■□□□ 1.72
Shkbp1-201ENSMUST00000003857 Slc4a2P13808 1237 aaKnown RBP25.8■■□□□ 1.72
Shkbp1-201ENSMUST00000003857 Arhgap31A6X8Z5 1425 aa25.8■■□□□ 1.72
Shkbp1-201ENSMUST00000003857 Washc2Q6PGL7 1334 aa25.8■■□□□ 1.72
Shkbp1-201ENSMUST00000003857 Mapkbp1Q6NS57 1503 aa25.79■■□□□ 1.72
Shkbp1-201ENSMUST00000003857 Dhx57Q6P5D3 1388 aaKnown RBP25.79■■□□□ 1.72
Shkbp1-201ENSMUST00000003857 Mroh2aD3Z750 1679 aa25.77■■□□□ 1.72
Shkbp1-201ENSMUST00000003857 Magi1Q6RHR9 1471 aa25.77■■□□□ 1.72
Shkbp1-201ENSMUST00000003857 Dhx9O70133 1380 aaKnown RBP25.76■■□□□ 1.71
Shkbp1-201ENSMUST00000003857 Nolc1E9Q5C9 702 aaKnown RBP25.75■■□□□ 1.71
Shkbp1-201ENSMUST00000003857 Exoc6Q8R313 802 aa25.75■■□□□ 1.71
Shkbp1-201ENSMUST00000003857 Trpm2Q91YD4 1506 aa25.75■■□□□ 1.71
Shkbp1-201ENSMUST00000003857 Wwc2Q6NXJ0 1187 aa25.74■■□□□ 1.71
Shkbp1-201ENSMUST00000003857 Prex2Q3LAC4 1598 aa25.72■■□□□ 1.71
Shkbp1-201ENSMUST00000003857 Ccdc141E9Q8Q6 1531 aa25.72■■□□□ 1.71
Shkbp1-201ENSMUST00000003857 Dapk1Q80YE7 1442 aa25.72■■□□□ 1.71
Shkbp1-201ENSMUST00000003857 Mug2P28666 1451 aa25.71■■□□□ 1.71
Shkbp1-201ENSMUST00000003857 Plekhg5Q66T02 1073 aa25.71■■□□□ 1.71
Shkbp1-201ENSMUST00000003857 Ttll5Q8CHB8 1328 aa25.71■■□□□ 1.71
Shkbp1-201ENSMUST00000003857 Fam163aQ8CAA5 168 aa25.7■■□□□ 1.71
Shkbp1-201ENSMUST00000003857 PnisrA2AJT4 805 aaKnown RBP25.7■■□□□ 1.7
Shkbp1-201ENSMUST00000003857 Cwc22Q8C5N3 908 aaKnown RBP25.7■■□□□ 1.7
Shkbp1-201ENSMUST00000003857 Zcchc11B2RX14 1644 aaKnown RBP25.7■■□□□ 1.7
Shkbp1-201ENSMUST00000003857 Naip6Q9JIB6 1403 aa25.69■■□□□ 1.7
Shkbp1-201ENSMUST00000003857 Mlh3A0A1Y7VMP7 1443 aa25.69■■□□□ 1.7
Shkbp1-201ENSMUST00000003857 DroshaQ5HZJ0 1373 aaKnown RBP25.68■■□□□ 1.7
Shkbp1-201ENSMUST00000003857 NrdcQ8BHG1 1161 aa25.67■■□□□ 1.7
Shkbp1-201ENSMUST00000003857 Wdr7Q920I9 1489 aa25.67■■□□□ 1.7
Shkbp1-201ENSMUST00000003857 Rgl3Q3UYI5 709 aa25.66■■□□□ 1.7
Shkbp1-201ENSMUST00000003857 Lrriq1Q0P5X1 1673 aa25.65■■□□□ 1.7
Shkbp1-201ENSMUST00000003857 Caskin1Q6P9K8 1431 aa25.64■■□□□ 1.7
Shkbp1-201ENSMUST00000003857 Eif5bQ05D44 1216 aaKnown RBP25.63■■□□□ 1.69
Shkbp1-201ENSMUST00000003857 Dnajc5bQ9CQ94 199 aa25.63■■□□□ 1.69
Shkbp1-201ENSMUST00000003857 Tdrd9Q14BI7 1383 aa25.62■■□□□ 1.69
Shkbp1-201ENSMUST00000003857 Trak1Q6PD31 939 aa25.61■■□□□ 1.69
Shkbp1-201ENSMUST00000003857 Myom3A2ABU4 1439 aa25.61■■□□□ 1.69
Shkbp1-201ENSMUST00000003857 Fmn2Q9JL04 1578 aa25.6■■□□□ 1.69
Shkbp1-201ENSMUST00000003857 Rundc1Q0VDN7 615 aa25.6■■□□□ 1.69
Shkbp1-201ENSMUST00000003857 Nup155Q99P88 1391 aaKnown RBP25.59■■□□□ 1.69
Shkbp1-201ENSMUST00000003857 Cdk13Q69ZA1 1511 aaKnown RBP25.57■■□□□ 1.68
Shkbp1-201ENSMUST00000003857 RalgapbQ8BQZ4 1484 aa25.56■■□□□ 1.68
Shkbp1-201ENSMUST00000003857 Dnmt1P13864 1620 aaKnown RBP25.56■■□□□ 1.68
Shkbp1-201ENSMUST00000003857 Wdr43Q6ZQL4 677 aaKnown RBP25.56■■□□□ 1.68
Shkbp1-201ENSMUST00000003857 Card11Q8CIS0 1159 aa25.54■■□□□ 1.68
Shkbp1-201ENSMUST00000003857 Supt16hQ920B9 1047 aa25.53■■□□□ 1.68
Shkbp1-201ENSMUST00000003857 Cpsf1Q9EPU4 1441 aaKnown RBP25.53■■□□□ 1.68
Shkbp1-201ENSMUST00000003857 Iqgap1Q9JKF1 1657 aaKnown RBP25.53■■□□□ 1.68
Shkbp1-201ENSMUST00000003857 Ppp4r2Q0VGB7 417 aa25.51■■□□□ 1.67
Shkbp1-201ENSMUST00000003857 Fam208aQ69ZR9 1610 aaKnown RBP25.5■■□□□ 1.67
Shkbp1-201ENSMUST00000003857 Dot1lQ6XZL8 1540 aa25.5■■□□□ 1.67
Shkbp1-201ENSMUST00000003857 Rusc2Q80U22 1514 aa25.48■■□□□ 1.67
Shkbp1-201ENSMUST00000003857 Rrbp1Q99PL5 1605 aaKnown RBP25.48■■□□□ 1.67
Shkbp1-201ENSMUST00000003857 Adgrl2Q8JZZ7 1487 aa25.48■■□□□ 1.67
Shkbp1-201ENSMUST00000003857 Map4P27546 1125 aaKnown RBP25.47■■□□□ 1.67
Shkbp1-201ENSMUST00000003857 P3h3Q8CG70 732 aa25.47■■□□□ 1.67
Shkbp1-201ENSMUST00000003857 Rock2P70336 1388 aa25.46■■□□□ 1.67
Shkbp1-201ENSMUST00000003857 Rtl5Q5DTT4 599 aa25.46■■□□□ 1.67
Shkbp1-201ENSMUST00000003857 Lrrc9Q8CDN9 1456 aa25.46■■□□□ 1.67
Shkbp1-201ENSMUST00000003857 PtprgQ05909 1442 aa25.45■■□□□ 1.66
Shkbp1-201ENSMUST00000003857 Polr3aB2RXC6 1390 aa25.44■■□□□ 1.66
Shkbp1-201ENSMUST00000003857 Fancd2Q80V62 1450 aa25.44■■□□□ 1.66
Shkbp1-201ENSMUST00000003857 Neo1P97798 1493 aa25.43■■□□□ 1.66
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms