RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Plekhh2Q8C115 1491 aa12.54□□□□□ -0.4
Col6a1-201ENSMUST00000001147 Dbr1Q923B1 550 aa12.54□□□□□ -0.4
Col6a1-201ENSMUST00000001147 Wdr62Q3U3T8 1523 aa12.54□□□□□ -0.4
Col6a1-201ENSMUST00000001147 3425401B19RikD3Z1D3 1412 aa12.53□□□□□ -0.4
Col6a1-201ENSMUST00000001147 Slx4Q6P1D7 1565 aa12.53□□□□□ -0.4
Col6a1-201ENSMUST00000001147 B4galnt3Q6L8S8 986 aa12.53□□□□□ -0.4
Col6a1-201ENSMUST00000001147 Cux1P53564 1515 aa12.53□□□□□ -0.4
Col6a1-201ENSMUST00000001147 WrnO09053 1401 aa12.53□□□□□ -0.4
Col6a1-201ENSMUST00000001147 Lamc3Q9R0B6 1581 aa12.52□□□□□ -0.4
Col6a1-201ENSMUST00000001147 Neurod2Q62414 383 aa12.52□□□□□ -0.4
Col6a1-201ENSMUST00000001147 Gm7298A0A0N4SVU1 1476 aa12.51□□□□□ -0.41
Col6a1-201ENSMUST00000001147 4930567H17RikQ3V0K5 233 aa12.51□□□□□ -0.41
Col6a1-201ENSMUST00000001147 CanxP35564 591 aaKnown RBP12.51□□□□□ -0.41
Col6a1-201ENSMUST00000001147 Tcerg1Q8CGF7 1100 aaKnown RBP12.51□□□□□ -0.41
Col6a1-201ENSMUST00000001147 TchhA0A0B4J1F9 1599 aa12.51□□□□□ -0.41
Col6a1-201ENSMUST00000001147 Ankrd26Q811D2 1581 aa12.51□□□□□ -0.41
Col6a1-201ENSMUST00000001147 PogzQ8BZH4 1409 aaKnown RBP12.51□□□□□ -0.41
Col6a1-201ENSMUST00000001147 Atp1b4Q99ME6 356 aa12.5□□□□□ -0.41
Col6a1-201ENSMUST00000001147 Naip2Q9QUK4 1447 aa12.49□□□□□ -0.41
Col6a1-201ENSMUST00000001147 Ifit1bl1D3Z6F0 470 aa12.49□□□□□ -0.41
Col6a1-201ENSMUST00000001147 Ccdc27Q3V036 639 aa12.49□□□□□ -0.41
Col6a1-201ENSMUST00000001147 Zscan21Q07231 555 aa12.48□□□□□ -0.41
Col6a1-201ENSMUST00000001147 Pak3Q61036 559 aa12.48□□□□□ -0.41
Col6a1-201ENSMUST00000001147 Nup155Q99P88 1391 aaKnown RBP12.48□□□□□ -0.41
Col6a1-201ENSMUST00000001147 Trim26Q99PN3 545 aa12.48□□□□□ -0.41
Col6a1-201ENSMUST00000001147 A2mQ6GQT1 1474 aa12.47□□□□□ -0.41
Col6a1-201ENSMUST00000001147 Hsp90aa1P07901 733 aaKnown RBP12.47□□□□□ -0.41
Col6a1-201ENSMUST00000001147 Dapk1Q80YE7 1442 aa12.47□□□□□ -0.41
Col6a1-201ENSMUST00000001147 Trim30dE9PWL0 497 aa12.45□□□□□ -0.42
Col6a1-201ENSMUST00000001147 Mak16Q8BGS0 296 aaKnown RBP12.45□□□□□ -0.42
Col6a1-201ENSMUST00000001147 Kcnh8P59111 1102 aa12.44□□□□□ -0.42
Col6a1-201ENSMUST00000001147 TnnQ80Z71 1560 aa12.44□□□□□ -0.42
Col6a1-201ENSMUST00000001147 Tdrd9Q14BI7 1383 aa12.43□□□□□ -0.42
Col6a1-201ENSMUST00000001147 Ift140E9PY46 1464 aa12.43□□□□□ -0.42
Col6a1-201ENSMUST00000001147 Gm20521D3Z5F7 333 aa12.43□□□□□ -0.42
Col6a1-201ENSMUST00000001147 PnisrA2AJT4 805 aaKnown RBP12.43□□□□□ -0.42
Col6a1-201ENSMUST00000001147 Hdac5Q9Z2V6 1113 aa12.43□□□□□ -0.42
Col6a1-201ENSMUST00000001147 Washc2Q6PGL7 1334 aa12.42□□□□□ -0.42
Col6a1-201ENSMUST00000001147 Stk24Q99KH8 431 aa12.42□□□□□ -0.42
Col6a1-201ENSMUST00000001147 Dhx9O70133 1380 aaKnown RBP12.42□□□□□ -0.42
Col6a1-201ENSMUST00000001147 Eif4g1Q6NZJ6 1600 aaKnown RBP12.41□□□□□ -0.42
Col6a1-201ENSMUST00000001147 ChgaP26339 463 aaKnown RBP12.41□□□□□ -0.42
Col6a1-201ENSMUST00000001147 Cnga1P29974 684 aa12.41□□□□□ -0.42
Col6a1-201ENSMUST00000001147 CrbnQ8C7D2 445 aa12.41□□□□□ -0.42
Col6a1-201ENSMUST00000001147 Naip5Q9R016 1403 aa12.41□□□□□ -0.42
Col6a1-201ENSMUST00000001147 CadpsQ80TJ1 1355 aa12.41□□□□□ -0.42
Col6a1-201ENSMUST00000001147 Rpgrip1lQ8CG73 1264 aa12.41□□□□□ -0.42
Col6a1-201ENSMUST00000001147 Polr1aO35134 1717 aaKnown RBP12.4□□□□□ -0.42
Col6a1-201ENSMUST00000001147 EprsQ8CGC7 1512 aaKnown RBP12.4□□□□□ -0.42
Col6a1-201ENSMUST00000001147 Cc2d2bA0A286YDU8 1405 aa12.4□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Irx3P81067 507 aa12.39□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Pank3Q8R2W9 370 aa12.39□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Ipo9Q91YE6 1041 aa12.39□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Inpp5dQ9ES52 1191 aa12.39□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Ttll5Q8CHB8 1328 aa12.38□□□□□ -0.43
Col6a1-201ENSMUST00000001147 AknaQ80VW7 1404 aa12.38□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Armcx1Q9CX83 456 aa12.38□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Gm1043A0A140LJC2 1431 aa12.38□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Speer4f1Q9D5Q6 258 aa12.37□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Ncoa2Q61026 1462 aa12.37□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Srpk2O54781 681 aaKnown RBP12.37□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Q7TT23 1179 aa12.37□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Rwdd1Q9CQK7 243 aa12.37□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Sart1Q9Z315 806 aaKnown RBP12.37□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Slc4a1apE9PX68 744 aa12.36□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Kdm5bQ80Y84 1544 aa12.36□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Hsp90ab1P11499 724 aaKnown RBP12.36□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Urb2E9Q7L1 1524 aaKnown RBP12.36□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Esx1O88933 382 aa12.36□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Chmp5Q9D7S9 219 aa12.35□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Rock2P70336 1388 aa12.35□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Tmf1B9EKI3 1091 aa12.35□□□□□ -0.43
Col6a1-201ENSMUST00000001147 SynmQ70IV5 1561 aa12.34□□□□□ -0.43
Col6a1-201ENSMUST00000001147 NexmifQ5DTT1 1515 aa12.34□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Ecm2Q5FW85 670 aa12.34□□□□□ -0.43
Col6a1-201ENSMUST00000001147 Dhx57Q6P5D3 1388 aaKnown RBP12.33□□□□□ -0.44
Col6a1-201ENSMUST00000001147 Srcin1Q9QWI6 1250 aa12.33□□□□□ -0.44
Col6a1-201ENSMUST00000001147 L3mbtl2P59178 703 aa12.32□□□□□ -0.44
Col6a1-201ENSMUST00000001147 Abcc5Q9R1X5 1436 aa12.32□□□□□ -0.44
Col6a1-201ENSMUST00000001147 Dcaf11Q91VU6 549 aa12.31□□□□□ -0.44
Col6a1-201ENSMUST00000001147 Ncoa1P70365 1447 aa12.3□□□□□ -0.44
Col6a1-201ENSMUST00000001147 Zfp444Q3TDV8 331 aaKnown RBP12.3□□□□□ -0.44
Col6a1-201ENSMUST00000001147 Arhgap31A6X8Z5 1425 aa12.29□□□□□ -0.44
Col6a1-201ENSMUST00000001147 Plekhg5Q66T02 1073 aa12.29□□□□□ -0.44
Col6a1-201ENSMUST00000001147 Arid4bA2CG63 1314 aaKnown RBP12.28□□□□□ -0.44
Col6a1-201ENSMUST00000001147 Gpatch8A2A6A1 1505 aa12.28□□□□□ -0.44
Col6a1-201ENSMUST00000001147 Arid3cA6PWV5 409 aa12.28□□□□□ -0.44
Col6a1-201ENSMUST00000001147 Gtf2e1Q9D0D5 440 aa12.27□□□□□ -0.44
Col6a1-201ENSMUST00000001147 Plb1Q3TTY0 1478 aa12.27□□□□□ -0.45
Col6a1-201ENSMUST00000001147 EspnQ9ET47 871 aa12.27□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Mug1P28665 1476 aa12.27□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Zscan10Q3URR7 782 aa12.26□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Stag3O70576 1240 aa12.26□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Ppm1gQ61074 542 aa12.26□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Jph4Q80WT0 628 aa12.26□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Spryd3E9Q9B3 442 aa12.25□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Erich3F6QRE9 1637 aa12.25□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Kif3bQ61771 747 aa12.25□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Gtf3c3Q3TMP1 882 aa12.25□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Fan1Q69ZT1 1020 aa12.25□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 171.4 ms