RNA–Protein interactions for RNA: snR46

snR46, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR46, Length 197 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR46	snR46	NUP2	P32499	720 aa		0.84	□□□□□ -2.27
snR46	snR46	GLC7	P32598	312 aa	Known RBP	0.84	□□□□□ -2.27
snR46	snR46	FMT1	P32785	401 aa		0.84	□□□□□ -2.27
snR46	snR46	ARA1	P38115	344 aa		0.84	□□□□□ -2.27
snR46	snR46	ICS2	P38284	255 aa		0.84	□□□□□ -2.27
snR46	snR46	YHR131C	P38835	850 aa		0.84	□□□□□ -2.27
snR46	snR46	FAU1	P40099	211 aa		0.84	□□□□□ -2.27
snR46	snR46	HIS6	P40545	261 aa		0.84	□□□□□ -2.27
snR46	snR46	YJR154W	P47181	346 aa		0.84	□□□□□ -2.27
snR46	snR46	GPI1	P53306	609 aa		0.84	□□□□□ -2.27
snR46	snR46	YNR061C	P53747	219 aa		0.84	□□□□□ -2.27
snR46	snR46	HER2	Q03557	464 aa		0.84	□□□□□ -2.27
snR46	snR46	AIM32	Q04689	311 aa		0.84	□□□□□ -2.27
snR46	snR46	BRE1	Q07457	700 aa	Known RBP	0.84	□□□□□ -2.27
snR46	snR46	VCX1	Q99385	411 aa		0.84	□□□□□ -2.27
snR46	snR46	SUI2	P20459	304 aa	Known RBP	0.83	□□□□□ -2.28
snR46	snR46	BUD5	P25300	642 aa	Predicted RBP	0.83	□□□□□ -2.28
snR46	snR46	CRM1	P30822	1084 aa	Known RBP	0.83	□□□□□ -2.28
snR46	snR46	FRE2	P36033	711 aa		0.83	□□□□□ -2.28
snR46	snR46	STB6	P36085	766 aa		0.83	□□□□□ -2.28
snR46	snR46	MRPS9	P38120	278 aa		0.83	□□□□□ -2.28
snR46	snR46	SEO1	P39709	593 aa		0.83	□□□□□ -2.28
snR46	snR46	YGR126W	P53274	230 aa		0.83	□□□□□ -2.28
snR46	snR46	FOL1	P53848	824 aa		0.83	□□□□□ -2.28
snR46	snR46	DPB4	Q04603	196 aa	Known RBP	0.83	□□□□□ -2.28
snR46	snR46	PSR1	Q07800	427 aa		0.83	□□□□□ -2.28
snR46	snR46	CUE5	Q08412	411 aa	Known RBP	0.83	□□□□□ -2.28
snR46	snR46	YPL199C	Q08954	240 aa		0.83	□□□□□ -2.28
snR46	snR46	MPD2	Q99316	277 aa		0.83	□□□□□ -2.28
snR46	snR46	RPS8A	P0CX39	200 aa	Known RBP	0.82	□□□□□ -2.28
snR46	snR46	RPS8B	P0CX40	200 aa	Known RBP	0.82	□□□□□ -2.28
snR46	snR46	VMA16	P23968	213 aa		0.82	□□□□□ -2.28
snR46	snR46	BOS1	P25385	244 aa		0.82	□□□□□ -2.28
snR46	snR46	RPL32	P38061	130 aa	Known RBP	0.82	□□□□□ -2.28
snR46	snR46	RCK2	P38623	610 aa		0.82	□□□□□ -2.28
snR46	snR46	POP6	P53218	158 aa		0.82	□□□□□ -2.28
snR46	snR46	DIA1	P54005	336 aa		0.82	□□□□□ -2.28
snR46	snR46	SKG3	Q06315	1026 aa		0.82	□□□□□ -2.28
snR46	snR46	PSK2	Q08217	1101 aa		0.82	□□□□□ -2.28
snR46	snR46	ETT1	Q08421	412 aa	Known RBP	0.82	□□□□□ -2.28
snR46	snR46	PSK1	P31374	1356 aa		0.82	□□□□□ -2.28
snR46	snR46	YLR302C	O13544	120 aa		0.81	□□□□□ -2.28
snR46	snR46	RAD52	P06778	471 aa	Known RBP	0.81	□□□□□ -2.28
snR46	snR46	APA1	P16550	321 aa	Known RBP	0.81	□□□□□ -2.28
snR46	snR46	ADH7	P25377	361 aa		0.81	□□□□□ -2.28
snR46	snR46	GRX4	P32642	244 aa		0.81	□□□□□ -2.28
snR46	snR46	GRX7	P38068	203 aa		0.81	□□□□□ -2.28
snR46	snR46	MSG5	P38590	489 aa		0.81	□□□□□ -2.28
snR46	snR46	OST1	P41543	476 aa	Known RBP	0.81	□□□□□ -2.28
snR46	snR46	PFS2	P42841	465 aa	Known RBP	0.81	□□□□□ -2.28
snR46	snR46	BRO1	P48582	844 aa		0.81	□□□□□ -2.28
snR46	snR46	FLC3	P53121	802 aa		0.81	□□□□□ -2.28
snR46	snR46	YGR127W	P53275	312 aa		0.81	□□□□□ -2.28
snR46	snR46	CWC25	P53854	179 aa	Known RBP	0.81	□□□□□ -2.28
snR46	snR46	MUB1	Q03162	620 aa		0.81	□□□□□ -2.28
snR46	snR46	SUC2	P00724	532 aa		0.8	□□□□□ -2.28
snR46	snR46	NPL6	P32832	435 aa		0.8	□□□□□ -2.28
snR46	snR46	MIX23	P38162	196 aa		0.8	□□□□□ -2.28
snR46	snR46	PAF1	P38351	445 aa		0.8	□□□□□ -2.28
snR46	snR46	YNG2	P38806	282 aa	Known RBP	0.8	□□□□□ -2.28
snR46	snR46	GAB1	P41733	394 aa		0.8	□□□□□ -2.28
snR46	snR46	GCD10	P41814	478 aa		0.8	□□□□□ -2.28
snR46	snR46	RRT5	P43607	289 aa		0.8	□□□□□ -2.28
snR46	snR46	VPS4	P52917	437 aa		0.8	□□□□□ -2.28
snR46	snR46	ART5	P53244	586 aa	Known RBP	0.8	□□□□□ -2.28
snR46	snR46	MKC7	P53379	596 aa		0.8	□□□□□ -2.28
snR46	snR46	INA17	Q02888	182 aa		0.8	□□□□□ -2.28
snR46	snR46	IRC25	Q07951	179 aa		0.8	□□□□□ -2.28
snR46	snR46	SAL1	D6W196	494 aa		0.79	□□□□□ -2.28
snR46	snR46	MSS18	P08593	268 aa		0.79	□□□□□ -2.28
snR46	snR46	SAM1	P10659	382 aa	Known RBP	0.79	□□□□□ -2.28
snR46	snR46	SAM2	P19358	384 aa	Known RBP	0.79	□□□□□ -2.28
snR46	snR46	PWP1	P21304	576 aa	Known RBP	0.79	□□□□□ -2.28
snR46	snR46	SPS22	P25380	463 aa		0.79	□□□□□ -2.28
snR46	snR46	YBL055C	P34220	418 aa	Predicted RBP	0.79	□□□□□ -2.28
snR46	snR46	YHR210C	P38893	341 aa		0.79	□□□□□ -2.28
snR46	snR46	PSD1	P39006	500 aa		0.79	□□□□□ -2.28
snR46	snR46	UTP18	P40362	594 aa	Predicted RBP	0.79	□□□□□ -2.28
snR46	snR46	DFG10	P40526	253 aa		0.79	□□□□□ -2.28
snR46	snR46	RBS1	Q05672	457 aa	Known RBP	0.79	□□□□□ -2.28
snR46	snR46	RTT109	Q07794	436 aa		0.79	□□□□□ -2.28
snR46	snR46	FDH1	Q08911	376 aa		0.79	□□□□□ -2.28
snR46	snR46	GLK1	P17709	500 aa	Known RBP	0.78	□□□□□ -2.28
snR46	snR46	PDB1	P32473	366 aa	Known RBP	0.78	□□□□□ -2.28
snR46	snR46	IME2	P32581	645 aa		0.78	□□□□□ -2.28
snR46	snR46	RIB5	P38145	238 aa		0.78	□□□□□ -2.28
snR46	snR46	SLZ1	P40167	298 aa		0.78	□□□□□ -2.28
snR46	snR46	CRH1	P53301	507 aa		0.78	□□□□□ -2.28
snR46	snR46	OGG1	P53397	376 aa	Predicted RBP	0.78	□□□□□ -2.28
snR46	snR46	TGL2	P54857	326 aa		0.78	□□□□□ -2.28
snR46	snR46	MRPL13	Q02204	264 aa		0.78	□□□□□ -2.28
snR46	snR46	YOR365C	Q08844	703 aa		0.78	□□□□□ -2.28
snR46	snR46	NFT1	P0CE68	1218 aa		0.77	□□□□□ -2.29
snR46	snR46	IMG1	P25626	169 aa		0.77	□□□□□ -2.29
snR46	snR46	TEF4	P36008	412 aa	Known RBP	0.77	□□□□□ -2.29
snR46	snR46	CIN4	P39110	191 aa		0.77	□□□□□ -2.29
snR46	snR46	RIC1	P40395	1056 aa		0.77	□□□□□ -2.29
snR46	snR46	FAR3	P46671	204 aa		0.77	□□□□□ -2.29
snR46	snR46	NCE102	Q12207	173 aa	RIP-Chip data	0.77	□□□□□ -2.29	not detected
snR46	snR46	HSH49	Q99181	213 aa	Predicted RBP	0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms