RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 SMARCC1Q92922 1105 aaPredicted RBP6.48□□□□□ -1.37
AP3S1-209ENST00000640413 ZBTB8AQ96BR9 441 aa6.48□□□□□ -1.37
AP3S1-209ENST00000640413 TSPAN17Q96FV3 270 aa6.48□□□□□ -1.37
AP3S1-209ENST00000640413 NTMQ9P121 344 aa6.48□□□□□ -1.37
AP3S1-209ENST00000640413 ZNRF3Q9ULT6 936 aa6.48□□□□□ -1.37
AP3S1-209ENST00000640413 SF3B6Q9Y3B4 125 aaKnown RBP6.48□□□□□ -1.37
AP3S1-209ENST00000640413 RWDD3Q9Y3V2 267 aa6.48□□□□□ -1.37
AP3S1-209ENST00000640413 POU4F1Q01851 419 aa6.47□□□□□ -1.37
AP3S1-209ENST00000640413 SMAD4Q13485 552 aaKnown RBP6.47□□□□□ -1.37
AP3S1-209ENST00000640413 PPP2R5DQ14738 602 aa6.47□□□□□ -1.37
AP3S1-209ENST00000640413 DDX11Q96FC9 970 aa6.47□□□□□ -1.37
AP3S1-209ENST00000640413 LOXL4Q96JB6 756 aa6.47□□□□□ -1.37
AP3S1-209ENST00000640413 C8orf49Q96NF6 230 aa6.47□□□□□ -1.37
AP3S1-209ENST00000640413 MCMBPQ9BTE3 642 aa6.47□□□□□ -1.37
AP3S1-209ENST00000640413 KRTAP3-1Q9BYR8 98 aa6.47□□□□□ -1.37
AP3S1-209ENST00000640413 TIMELESSQ9UNS1 1208 aa6.47□□□□□ -1.37
AP3S1-209ENST00000640413 PPP1R11O60927 126 aaPredicted RBP6.46□□□□□ -1.38
AP3S1-209ENST00000640413 FSHBP01225 129 aa6.46□□□□□ -1.38
AP3S1-209ENST00000640413 ITGA4P13612 1032 aa6.46□□□□□ -1.38
AP3S1-209ENST00000640413 CACNB2Q08289 660 aaPredicted RBP6.46□□□□□ -1.38
AP3S1-209ENST00000640413 CPZQ66K79 652 aa6.46□□□□□ -1.38
AP3S1-209ENST00000640413 UNC5AQ6ZN44 842 aa6.46□□□□□ -1.38
AP3S1-209ENST00000640413 RUFY4Q6ZNE9 571 aa6.46□□□□□ -1.38
AP3S1-209ENST00000640413 CABP7Q86V35 215 aa6.46□□□□□ -1.38
AP3S1-209ENST00000640413 KIAA0825Q8IV33 1275 aa6.46□□□□□ -1.38
AP3S1-209ENST00000640413 LZTR1Q8N653 840 aa6.46□□□□□ -1.38
AP3S1-209ENST00000640413 SLC16A11Q8NCK7 471 aa6.46□□□□□ -1.38
AP3S1-209ENST00000640413 SPON2Q9BUD6 331 aa6.46□□□□□ -1.38
AP3S1-209ENST00000640413 ZNF20P17024 532 aa6.45□□□□□ -1.38
AP3S1-209ENST00000640413 TTLL7Q6ZT98 887 aa6.45□□□□□ -1.38
AP3S1-209ENST00000640413 TAB3Q8N5C8 712 aaPredicted RBP6.45□□□□□ -1.38
AP3S1-209ENST00000640413 ADAMTS17Q8TE56 1095 aa6.45□□□□□ -1.38
AP3S1-209ENST00000640413 CPA5Q8WXQ8 436 aa6.45□□□□□ -1.38
AP3S1-209ENST00000640413 PEX11GQ96HA9 241 aa6.45□□□□□ -1.38
AP3S1-209ENST00000640413 FERD3LQ96RJ6 166 aa6.45□□□□□ -1.38
AP3S1-209ENST00000640413 SYT3Q9BQG1 590 aa6.45□□□□□ -1.38
AP3S1-209ENST00000640413 SUV39H1O43463 412 aa6.44□□□□□ -1.38
AP3S1-209ENST00000640413 TBC1D10BQ4KMP7 808 aaPredicted RBP6.44□□□□□ -1.38
AP3S1-209ENST00000640413 FBXW10Q5XX13 1052 aa6.44□□□□□ -1.38
AP3S1-209ENST00000640413 RCSD1Q6JBY9 416 aa6.44□□□□□ -1.38
AP3S1-209ENST00000640413 CPNE8Q86YQ8 564 aa6.44□□□□□ -1.38
AP3S1-209ENST00000640413 ADCY4Q8NFM4 1077 aa6.44□□□□□ -1.38
AP3S1-209ENST00000640413 TM9SF2Q99805 663 aa6.44□□□□□ -1.38
AP3S1-209ENST00000640413 GULP1Q9UBP9 304 aa6.44□□□□□ -1.38
AP3S1-209ENST00000640413 NUDT5Q9UKK9 219 aa6.44□□□□□ -1.38
AP3S1-209ENST00000640413 SIT1Q9Y3P8 196 aa6.44□□□□□ -1.38
AP3S1-209ENST00000640413 STXBP3O00186 592 aa6.43□□□□□ -1.38
AP3S1-209ENST00000640413 AURKAO14965 403 aa6.43□□□□□ -1.38
AP3S1-209ENST00000640413 CBFA2T2O43439 604 aa6.43□□□□□ -1.38
AP3S1-209ENST00000640413 VAMP4O75379 141 aa6.43□□□□□ -1.38
AP3S1-209ENST00000640413 PLATP00750 562 aa6.43□□□□□ -1.38
AP3S1-209ENST00000640413 IMPDH2P12268 514 aa6.43□□□□□ -1.38
AP3S1-209ENST00000640413 TRIM26Q12899 539 aaPredicted RBP6.43□□□□□ -1.38
AP3S1-209ENST00000640413 MRPL58Q14197 206 aaKnown RBP6.43□□□□□ -1.38
AP3S1-209ENST00000640413 TCEAL1Q15170 157 aa6.43□□□□□ -1.38
AP3S1-209ENST00000640413 DPY19L1Q2PZI1 675 aa6.43□□□□□ -1.38
AP3S1-209ENST00000640413 NETO2Q8NC67 525 aa6.43□□□□□ -1.38
AP3S1-209ENST00000640413 SAMD11Q96NU1 681 aa6.43□□□□□ -1.38
AP3S1-209ENST00000640413 MTA3Q9BTC8 594 aa6.43□□□□□ -1.38
AP3S1-209ENST00000640413 DIS3Q9Y2L1 958 aaKnown RBP6.43□□□□□ -1.38
AP3S1-209ENST00000640413 A0A087WZG4 1122 aa6.42□□□□□ -1.38
AP3S1-209ENST00000640413 C1QTNF3-AMACRE9PGA6 284 aa6.42□□□□□ -1.38
AP3S1-209ENST00000640413 SMARCA5O60264 1052 aaPredicted RBP6.42□□□□□ -1.38
AP3S1-209ENST00000640413 C8BP07358 591 aa6.42□□□□□ -1.38
AP3S1-209ENST00000640413 GUCY2CP25092 1073 aa6.42□□□□□ -1.38
AP3S1-209ENST00000640413 SLC9A5Q14940 896 aa6.42□□□□□ -1.38
AP3S1-209ENST00000640413 RGL3Q3MIN7 710 aa6.42□□□□□ -1.38
AP3S1-209ENST00000640413 EEF1DP3Q658K8 133 aa6.42□□□□□ -1.38
AP3S1-209ENST00000640413 LINC00482Q8N8I6 264 aa6.42□□□□□ -1.38
AP3S1-209ENST00000640413 GORASP1Q9BQQ3 440 aa6.42□□□□□ -1.38
AP3S1-209ENST00000640413 C1QTNF3Q9BXJ4 246 aa6.42□□□□□ -1.38
AP3S1-209ENST00000640413 SRRDQ9UH36 339 aa6.42□□□□□ -1.38
AP3S1-209ENST00000640413 ZNF214Q9UL59 606 aaPredicted RBP6.42□□□□□ -1.38
AP3S1-209ENST00000640413 PPT2Q9UMR5 302 aa6.42□□□□□ -1.38
AP3S1-209ENST00000640413 USP33Q8TEY7 942 aa6.41□□□□□ -1.38
AP3S1-209ENST00000640413 SCAND2PQ9GZW5 306 aaPredicted RBP6.41□□□□□ -1.38
AP3S1-209ENST00000640413 INVSQ9Y283 1065 aa6.41□□□□□ -1.38
AP3S1-209ENST00000640413 LTBP3Q9NS15 1303 aa6.41□□□□□ -1.38
AP3S1-209ENST00000640413 ZBTB7AO95365 584 aa6.4□□□□□ -1.38
AP3S1-209ENST00000640413 CYP2C8P10632 490 aa6.4□□□□□ -1.38
AP3S1-209ENST00000640413 ERCC3P19447 782 aa6.4□□□□□ -1.38
AP3S1-209ENST00000640413 WWC2Q6AWC2 1192 aa6.4□□□□□ -1.38
AP3S1-209ENST00000640413 STK32CQ86UX6 486 aa6.4□□□□□ -1.38
AP3S1-209ENST00000640413 TTC9BQ8N6N2 239 aa6.4□□□□□ -1.38
AP3S1-209ENST00000640413 CHST13Q8NET6 341 aa6.4□□□□□ -1.38
AP3S1-209ENST00000640413 C11orf84Q9BUA3 381 aaPredicted RBP6.4□□□□□ -1.38
AP3S1-209ENST00000640413 ST6GALNAC2Q9UJ37 374 aa6.4□□□□□ -1.38
AP3S1-209ENST00000640413 NTRK1P04629 796 aa6.39□□□□□ -1.39
AP3S1-209ENST00000640413 THBS2P35442 1172 aa6.39□□□□□ -1.39
AP3S1-209ENST00000640413 SEPHS1P49903 392 aa6.39□□□□□ -1.39
AP3S1-209ENST00000640413 MCTP2Q6DN12 878 aa6.39□□□□□ -1.39
AP3S1-209ENST00000640413 LIMS2Q7Z4I7 341 aa6.39□□□□□ -1.39
AP3S1-209ENST00000640413 FAM26EQ8N5C1 309 aa6.39□□□□□ -1.39
AP3S1-209ENST00000640413 RNF34Q969K3 372 aa6.39□□□□□ -1.39
AP3S1-209ENST00000640413 HAUS7Q99871 368 aa6.39□□□□□ -1.39
AP3S1-209ENST00000640413 SSBP3Q9BWW4 388 aaPredicted RBP6.39□□□□□ -1.39
AP3S1-209ENST00000640413 WHRNQ9P202 907 aa6.39□□□□□ -1.39
AP3S1-209ENST00000640413 ZNF536O15090 1300 aa6.39□□□□□ -1.39
AP3S1-209ENST00000640413 C2orf71A6NGG8 1288 aa6.38□□□□□ -1.39
AP3S1-209ENST00000640413 FUCA1P04066 466 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms