RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 RFXAPO00287 272 aa7.84□□□□□ -1.15
CCDC7-216ENST00000640058 PAMP19021 973 aa7.84□□□□□ -1.15
CCDC7-216ENST00000640058 ZNF200P98182 395 aaPredicted RBP7.84□□□□□ -1.15
CCDC7-216ENST00000640058 CBX2Q14781 532 aaPredicted RBP7.84□□□□□ -1.15
CCDC7-216ENST00000640058 NR1I3Q14994 352 aa7.84□□□□□ -1.15
CCDC7-216ENST00000640058 SV2CQ496J9 727 aa7.84□□□□□ -1.15
CCDC7-216ENST00000640058 ZNF385BQ569K4 471 aa7.84□□□□□ -1.15
CCDC7-216ENST00000640058 GTF2IRD2BQ6EKJ0 949 aa7.84□□□□□ -1.15
CCDC7-216ENST00000640058 GTF2IRD2Q86UP8 949 aa7.84□□□□□ -1.15
CCDC7-216ENST00000640058 MCF2L2Q86YR7 1114 aa7.84□□□□□ -1.15
CCDC7-216ENST00000640058 CRACR2BQ8N4Y2 399 aaPredicted RBP7.84□□□□□ -1.15
CCDC7-216ENST00000640058 MICAL1Q8TDZ2 1067 aa7.84□□□□□ -1.15
CCDC7-216ENST00000640058 FBLN5Q9UBX5 448 aa7.84□□□□□ -1.15
CCDC7-216ENST00000640058 DBR1Q9UK59 544 aaKnown RBP7.84□□□□□ -1.15
CCDC7-216ENST00000640058 PLA2G2DQ9UNK4 145 aa7.84□□□□□ -1.15
CCDC7-216ENST00000640058 ARID1BQ8NFD5 2236 aaPredicted RBP7.83□□□□□ -1.16
CCDC7-216ENST00000640058 NPHP3-ACAD11A0A0J9YXS1 232 aa7.83□□□□□ -1.16
CCDC7-216ENST00000640058 F8W031 263 aaPredicted RBP7.83□□□□□ -1.16
CCDC7-216ENST00000640058 TBX1O43435 398 aa7.83□□□□□ -1.16
CCDC7-216ENST00000640058 CYBBP04839 570 aa7.83□□□□□ -1.16
CCDC7-216ENST00000640058 PLS3P13797 630 aa7.83□□□□□ -1.16
CCDC7-216ENST00000640058 MAPKAPK2P49137 400 aa7.83□□□□□ -1.16
CCDC7-216ENST00000640058 ZNF143P52747 638 aaPredicted RBP7.83□□□□□ -1.16
CCDC7-216ENST00000640058 CORO7P57737 925 aa7.83□□□□□ -1.16
CCDC7-216ENST00000640058 POMZP3Q6PJE2 187 aa7.83□□□□□ -1.16
CCDC7-216ENST00000640058 PAQR3Q6TCH7 311 aa7.83□□□□□ -1.16
CCDC7-216ENST00000640058 IGDCC3Q8IVU1 814 aa7.83□□□□□ -1.16
CCDC7-216ENST00000640058 TRIM59Q8IWR1 403 aa7.83□□□□□ -1.16
CCDC7-216ENST00000640058 BTN2A2Q8WVV5 523 aa7.83□□□□□ -1.16
CCDC7-216ENST00000640058 LRP2BPQ9P2M1 347 aa7.83□□□□□ -1.16
CCDC7-216ENST00000640058 SRGAP3O43295 1099 aa7.82□□□□□ -1.16
CCDC7-216ENST00000640058 MRM1Q6IN84 353 aaKnown RBP7.82□□□□□ -1.16
CCDC7-216ENST00000640058 SIAH1Q8IUQ4 282 aa7.82□□□□□ -1.16
CCDC7-216ENST00000640058 HNRNPLLQ8WVV9 542 aaKnown RBP7.82□□□□□ -1.16
CCDC7-216ENST00000640058 MRGPRX3Q96LB0 322 aa7.82□□□□□ -1.16
CCDC7-216ENST00000640058 BCAS3Q9H6U6 928 aa7.82□□□□□ -1.16
CCDC7-216ENST00000640058 SUSD5O60279 629 aa7.81□□□□□ -1.16
CCDC7-216ENST00000640058 BUB1BO60566 1050 aaPredicted RBP7.81□□□□□ -1.16
CCDC7-216ENST00000640058 PPP1R11O60927 126 aaPredicted RBP7.81□□□□□ -1.16
CCDC7-216ENST00000640058 THBDP07204 575 aa7.81□□□□□ -1.16
CCDC7-216ENST00000640058 FXNQ16595 210 aa7.81□□□□□ -1.16
CCDC7-216ENST00000640058 MBLAC2Q68D91 279 aa7.81□□□□□ -1.16
CCDC7-216ENST00000640058 TMEFF1Q8IYR6 380 aa7.81□□□□□ -1.16
CCDC7-216ENST00000640058 LZTR1Q8N653 840 aa7.81□□□□□ -1.16
CCDC7-216ENST00000640058 NLGN2Q8NFZ4 835 aa7.81□□□□□ -1.16
CCDC7-216ENST00000640058 EPB41L4AQ9HCS5 686 aaPredicted RBP7.81□□□□□ -1.16
CCDC7-216ENST00000640058 BTG4Q9NY30 223 aa7.81□□□□□ -1.16
CCDC7-216ENST00000640058 PCDHA5Q9Y5H7 936 aa7.81□□□□□ -1.16
CCDC7-216ENST00000640058 C7orf72A4D263 438 aa7.8□□□□□ -1.16
CCDC7-216ENST00000640058 IRS4O14654 1257 aaPredicted RBP7.8□□□□□ -1.16
CCDC7-216ENST00000640058 NPHS1O60500 1241 aa7.8□□□□□ -1.16
CCDC7-216ENST00000640058 ITGAVP06756 1048 aa7.8□□□□□ -1.16
CCDC7-216ENST00000640058 PRR5P85299 388 aa7.8□□□□□ -1.16
CCDC7-216ENST00000640058 VMACQ2NL98 169 aa7.8□□□□□ -1.16
CCDC7-216ENST00000640058 TCERG1LQ5VWI1 586 aa7.8□□□□□ -1.16
CCDC7-216ENST00000640058 CABP7Q86V35 215 aa7.8□□□□□ -1.16
CCDC7-216ENST00000640058 AMIGO3Q86WK7 504 aa7.8□□□□□ -1.16
CCDC7-216ENST00000640058 ZNF227Q86WZ6 799 aa7.8□□□□□ -1.16
CCDC7-216ENST00000640058 USP33Q8TEY7 942 aa7.8□□□□□ -1.16
CCDC7-216ENST00000640058 COPS5Q92905 334 aa7.8□□□□□ -1.16
CCDC7-216ENST00000640058 ST7Q9NRC1 585 aa7.8□□□□□ -1.16
CCDC7-216ENST00000640058 R3HCC1Q9Y3T6 440 aaKnown RBP7.8□□□□□ -1.16
CCDC7-216ENST00000640058 E9PSI1 815 aa7.79□□□□□ -1.16
CCDC7-216ENST00000640058 GJB6O95452 261 aa7.79□□□□□ -1.16
CCDC7-216ENST00000640058 GLI4P10075 376 aa7.79□□□□□ -1.16
CCDC7-216ENST00000640058 LIMS1P48059 325 aa7.79□□□□□ -1.16
CCDC7-216ENST00000640058 CYP4F3Q08477 520 aa7.79□□□□□ -1.16
CCDC7-216ENST00000640058 CNKSR3Q6P9H4 555 aa7.79□□□□□ -1.16
CCDC7-216ENST00000640058 MTA3Q9BTC8 594 aa7.79□□□□□ -1.16
CCDC7-216ENST00000640058 NKX2-4Q9H2Z4 354 aa7.79□□□□□ -1.16
CCDC7-216ENST00000640058 TRBV23OR9-2A0A075B6M9 112 aa7.78□□□□□ -1.16
CCDC7-216ENST00000640058 FUCA1P04066 466 aa7.78□□□□□ -1.16
CCDC7-216ENST00000640058 BMP7P18075 431 aa7.78□□□□□ -1.16
CCDC7-216ENST00000640058 ECI1P42126 302 aa7.78□□□□□ -1.16
CCDC7-216ENST00000640058 AFF3P51826 1226 aaKnown RBP7.78□□□□□ -1.16
CCDC7-216ENST00000640058 INF2Q27J81 1249 aa7.78□□□□□ -1.16
CCDC7-216ENST00000640058 LCE4AQ5TA78 99 aa7.78□□□□□ -1.16
CCDC7-216ENST00000640058 ANKS3Q6ZW76 656 aa7.78□□□□□ -1.16
CCDC7-216ENST00000640058 FAM129CQ86XR2 697 aa7.78□□□□□ -1.16
CCDC7-216ENST00000640058 CELF2-AS1Q8N7Q2 184 aa7.78□□□□□ -1.16
CCDC7-216ENST00000640058 CYP26B1Q9NR63 512 aa7.78□□□□□ -1.16
CCDC7-216ENST00000640058 MARCH2Q9P0N8 246 aa7.78□□□□□ -1.16
CCDC7-216ENST00000640058 SNRPB2P08579 225 aaKnown RBP7.77□□□□□ -1.17
CCDC7-216ENST00000640058 INHBBP09529 407 aa7.77□□□□□ -1.17
CCDC7-216ENST00000640058 SF1Q15637 639 aaKnown RBP7.77□□□□□ -1.17
CCDC7-216ENST00000640058 PRSS53Q2L4Q9 553 aa7.77□□□□□ -1.17
CCDC7-216ENST00000640058 TEX2Q8IWB9 1127 aa7.77□□□□□ -1.17
CCDC7-216ENST00000640058 FRS2Q8WU20 508 aa7.77□□□□□ -1.17
CCDC7-216ENST00000640058 ALG3Q92685 438 aa7.77□□□□□ -1.17
CCDC7-216ENST00000640058 DACT3Q96B18 629 aaPredicted RBP7.77□□□□□ -1.17
CCDC7-216ENST00000640058 IGSF5Q9NSI5 407 aa7.77□□□□□ -1.17
CCDC7-216ENST00000640058 SIT1Q9Y3P8 196 aa7.77□□□□□ -1.17
CCDC7-216ENST00000640058 PFKLP17858 780 aa7.76□□□□□ -1.17
CCDC7-216ENST00000640058 MC3RP41968 323 aa7.76□□□□□ -1.17
CCDC7-216ENST00000640058 KCNJ6P48051 423 aa7.76□□□□□ -1.17
CCDC7-216ENST00000640058 WWC2Q6AWC2 1192 aa7.76□□□□□ -1.17
CCDC7-216ENST00000640058 TMEM151BQ8IW70 566 aa7.76□□□□□ -1.17
CCDC7-216ENST00000640058 SLC43A3Q8NBI5 491 aa7.76□□□□□ -1.17
CCDC7-216ENST00000640058 NPLOC4Q8TAT6 608 aa7.76□□□□□ -1.17
CCDC7-216ENST00000640058 DPF3Q92784 378 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms