RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 RSPO2Q6UXX9 243 aaPredicted RBP4.5□□□□□ -1.69
CCDC7-213ENST00000639290 ZNF574Q6ZN55 896 aaPredicted RBP4.5□□□□□ -1.69
CCDC7-213ENST00000639290 NGEFQ8N5V2 710 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 KCTD17Q8N5Z5 321 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 MAGEB6Q8N7X4 407 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 PLBD2Q8NHP8 589 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 PTCD2Q8WV60 388 aaKnown RBP4.5□□□□□ -1.69
CCDC7-213ENST00000639290 P2RX5Q93086 422 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 CARD11Q9BXL7 1154 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 ERVK-5Q9HDB9 667 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 SPEF2Q9C093 1822 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 IGSF10Q6WRI0 2623 aa4.5□□□□□ -1.69
CCDC7-213ENST00000639290 MROH5Q6ZUA9 1318 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 LOC100996750A0A140TA64 210 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 F5H6K3 240 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 KCNJ4P48050 445 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 HMGCS2P54868 508 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 BACE1P56817 501 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 SPEM2Q0P670 501 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 TAF7Q15545 349 aaPredicted RBP4.49□□□□□ -1.69
CCDC7-213ENST00000639290 PDE12Q6L8Q7 609 aaKnown RBP4.49□□□□□ -1.69
CCDC7-213ENST00000639290 APOBEC3HQ6NTF7 200 aaKnown RBP4.49□□□□□ -1.69
CCDC7-213ENST00000639290 AFAP1L1Q8TED9 768 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 KLHL5Q96PQ7 755 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 KRTAP4-6Q9BYQ5 205 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 PRMT8Q9NR22 394 aaPredicted RBP4.49□□□□□ -1.69
CCDC7-213ENST00000639290 GREB1Q4ZG55 1949 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 C2CD3Q4AC94 2353 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 TEX51A0A1B0GUA7 166 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 LAMTOR5O43504 91 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 MAP4K4O95819 1239 aaPredicted RBP4.49□□□□□ -1.69
CCDC7-213ENST00000639290 AMHP03971 560 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 IQCF3P0C7M6 154 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 MYL6BP14649 208 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 IGHMBP2P38935 993 aaKnown RBP4.49□□□□□ -1.69
CCDC7-213ENST00000639290 MTHFRP42898 656 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 TDGQ13569 410 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 ITGA7Q13683 1181 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 NFE2L2Q16236 605 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 SNRNP48Q6IEG0 339 aaKnown RBP4.49□□□□□ -1.69
CCDC7-213ENST00000639290 SPRED2Q7Z698 418 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 PLPP6Q8IY26 295 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 CAGE1Q8TC20 777 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 RIN2Q8WYP3 895 aaPredicted RBP4.49□□□□□ -1.69
CCDC7-213ENST00000639290 NXPE3Q969Y0 559 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 FAM89AQ96GI7 184 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 IDI2Q9BXS1 227 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 CNPY2Q9Y2B0 182 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 DNAH12Q6ZR08 3092 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 TENM4Q6N022 2769 aa4.49□□□□□ -1.69
CCDC7-213ENST00000639290 USP17L15C9J2P7 530 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 USP17L13C9JLJ4 530 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 USP17L11C9JVI0 530 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 USP17L18D6R9N7 530 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 USP17L22D6RA61 530 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 USP17L17D6RBQ6 530 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 USP17L19D6RCP7 530 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 USP17L20D6RJB6 530 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 USP17L24Q0WX57 530 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 SPP2Q13103 211 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 PDIA6Q15084 440 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 AASDHQ4L235 1098 aaPredicted RBP4.48□□□□□ -1.69
CCDC7-213ENST00000639290 STPG1Q5TH74 334 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 ANO1Q5XXA6 986 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 MB21D1Q8N884 522 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 TDRD5Q8NAT2 981 aaKnown RBP4.48□□□□□ -1.69
CCDC7-213ENST00000639290 RASGRP4Q8TDF6 673 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 TINF2Q9BSI4 451 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 TRAIPQ9BWF2 469 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 FTOQ9C0B1 505 aaKnown RBP eCLIP4.48□□□□□ -1.69
CCDC7-213ENST00000639290 S1PR5Q9H228 398 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 GPR108Q9NPR9 543 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 IGSF9Q9P2J2 1179 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 B4GALT4O60513 344 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 POU3F2P20265 443 aaPredicted RBP4.48□□□□□ -1.69
CCDC7-213ENST00000639290 RFX1P22670 979 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 ITIH3Q06033 890 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 PPP2R5DQ14738 602 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 PSAPL1Q6NUJ1 521 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 USP17L2Q6R6M4 530 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 VTI1AQ96AJ9 217 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 SCLYQ96I15 445 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 SHDQ96IW2 340 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 FBXL21Q9UKT6 434 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 MTUS1Q9ULD2 1270 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 Q9Y3F1 56 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 SIT1Q9Y3P8 196 aa4.48□□□□□ -1.69
CCDC7-213ENST00000639290 B8ZZF3 427 aa4.47□□□□□ -1.69
CCDC7-213ENST00000639290 RAD21O60216 631 aa4.47□□□□□ -1.69
CCDC7-213ENST00000639290 ZNF806P0C7X5 589 aa4.47□□□□□ -1.69
CCDC7-213ENST00000639290 NOVA1P51513 510 aaKnown RBP4.47□□□□□ -1.69
CCDC7-213ENST00000639290 EIF4A1P60842 406 aaKnown RBP4.47□□□□□ -1.69
CCDC7-213ENST00000639290 KRT25Q7Z3Z0 450 aa4.47□□□□□ -1.69
CCDC7-213ENST00000639290 CCDC82Q8N4S0 544 aa4.47□□□□□ -1.69
CCDC7-213ENST00000639290 RTF1Q92541 710 aaKnown RBP4.47□□□□□ -1.69
CCDC7-213ENST00000639290 ALDH8A1Q9H2A2 487 aaPredicted RBP4.47□□□□□ -1.69
CCDC7-213ENST00000639290 CCDC86Q9H6F5 360 aaKnown RBP4.47□□□□□ -1.69
CCDC7-213ENST00000639290 BPTFQ12830 3046 aa4.47□□□□□ -1.69
CCDC7-213ENST00000639290 TNFAIP2Q03169 654 aa4.47□□□□□ -1.69
CCDC7-213ENST00000639290 IKBKEQ14164 716 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms