RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 GPAA1O43292 621 aa6.54□□□□□ -1.36
PDE4D-229ENST00000638939 ZBED4O75132 1171 aa6.54□□□□□ -1.36
PDE4D-229ENST00000638939 TTLL1O95922 423 aa6.54□□□□□ -1.36
PDE4D-229ENST00000638939 ASGR1P07306 291 aa6.54□□□□□ -1.36
PDE4D-229ENST00000638939 C6orf222P0C671 652 aaPredicted RBP6.54□□□□□ -1.36
PDE4D-229ENST00000638939 STAT2P52630 851 aa6.54□□□□□ -1.36
PDE4D-229ENST00000638939 LRRFIP1Q32MZ4 808 aaKnown RBP6.54□□□□□ -1.36
PDE4D-229ENST00000638939 CCDC144BQ3MJ40 725 aa6.54□□□□□ -1.36
PDE4D-229ENST00000638939 C6orf132Q5T0Z8 1188 aa6.54□□□□□ -1.36
PDE4D-229ENST00000638939 PPP2R2DQ66LE6 453 aa6.54□□□□□ -1.36
PDE4D-229ENST00000638939 PADI6Q6TGC4 694 aa6.54□□□□□ -1.36
PDE4D-229ENST00000638939 CCDC129Q6ZRS4 1044 aa6.54□□□□□ -1.36
PDE4D-229ENST00000638939 ARMCX2Q7L311 632 aa6.54□□□□□ -1.36
PDE4D-229ENST00000638939 FAM126BQ8IXS8 530 aa6.54□□□□□ -1.36
PDE4D-229ENST00000638939 LRRC47Q8N1G4 583 aaKnown RBP6.54□□□□□ -1.36
PDE4D-229ENST00000638939 ANKRD35Q8N283 1001 aa6.54□□□□□ -1.36
PDE4D-229ENST00000638939 OSBP2Q969R2 916 aa6.54□□□□□ -1.36
PDE4D-229ENST00000638939 TIFAQ96CG3 184 aa6.54□□□□□ -1.36
PDE4D-229ENST00000638939 GMCL1Q96IK5 515 aa6.54□□□□□ -1.36
PDE4D-229ENST00000638939 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.54□□□□□ -1.36
PDE4D-229ENST00000638939 SEZ6LQ9BYH1 1024 aa6.54□□□□□ -1.36
PDE4D-229ENST00000638939 MTMR4Q9NYA4 1195 aa6.54□□□□□ -1.36
PDE4D-229ENST00000638939 TTC41PQ6P2S7 1318 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 MINDY4BA8MYZ0 360 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 TLR3O15455 904 aaKnown RBP6.53□□□□□ -1.36
PDE4D-229ENST00000638939 RNF113AO15541 343 aaKnown RBP6.53□□□□□ -1.36
PDE4D-229ENST00000638939 PLA2G6O60733 806 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 CABYRO75952 493 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 CD4P01730 458 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 SLC4A3P48751 1232 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 TDO2P48775 406 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 PRSS12P56730 875 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 GRIN2CQ14957 1233 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 RAB30Q15771 203 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 TSR1Q2NL82 804 aaKnown RBP6.53□□□□□ -1.36
PDE4D-229ENST00000638939 TKFCQ3LXA3 575 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 TJAP1Q5JTD0 557 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 GNASQ5JWF2 1037 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 PPP4R3BQ5MIZ7 849 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 TMEM240Q5SV17 173 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 AKNAD1Q5T1N1 836 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 TLK2Q86UE8 772 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 FAM160B2Q86V87 743 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 CCDC144CPQ8IYA2 1237 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 CPXCR1Q8N123 301 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 TMEM199Q8N511 208 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 FAM133AQ8N9E0 248 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 USP38Q8NB14 1042 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 SLC43A3Q8NBI5 491 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 NEDD1Q8NHV4 660 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 KIFC2Q96AC6 838 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 MTIF3Q9H2K0 278 aaKnown RBP6.53□□□□□ -1.36
PDE4D-229ENST00000638939 ZNF576Q9H609 170 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 ACAD9Q9H845 621 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 RAVER2Q9HCJ3 691 aaKnown RBP6.53□□□□□ -1.36
PDE4D-229ENST00000638939 A1CFQ9NQ94 594 aaKnown RBP6.53□□□□□ -1.36
PDE4D-229ENST00000638939 PRDM6Q9NQX0 595 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 PLSCR2Q9NRY7 297 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 CLIP2Q9UDT6 1046 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 CTDP1Q9Y5B0 961 aaPredicted RBP6.53□□□□□ -1.36
PDE4D-229ENST00000638939 DOCK5Q9H7D0 1870 aa6.53□□□□□ -1.36
PDE4D-229ENST00000638939 ASTN1O14525 1302 aa6.52□□□□□ -1.37
PDE4D-229ENST00000638939 ZNF536O15090 1300 aa6.52□□□□□ -1.37
PDE4D-229ENST00000638939 KAT6AQ92794 2004 aa6.52□□□□□ -1.37
PDE4D-229ENST00000638939 LOC102724159A0A0B4J2E5 919 aa6.52□□□□□ -1.37
PDE4D-229ENST00000638939 ASB14A6NK59 587 aa6.52□□□□□ -1.37
PDE4D-229ENST00000638939 M0R2C6 588 aa6.52□□□□□ -1.37
PDE4D-229ENST00000638939 SLC3A2P08195 630 aaKnown RBP6.52□□□□□ -1.37
PDE4D-229ENST00000638939 TSPY3P0CV98 308 aa6.52□□□□□ -1.37
PDE4D-229ENST00000638939 TSPY8P0CW00 308 aa6.52□□□□□ -1.37
PDE4D-229ENST00000638939 BMP3P12645 472 aa6.52□□□□□ -1.37
PDE4D-229ENST00000638939 CSF2RAP15509 400 aa6.52□□□□□ -1.37
PDE4D-229ENST00000638939 FOSBP53539 338 aa6.52□□□□□ -1.37
PDE4D-229ENST00000638939 TNFAIP2Q03169 654 aa6.52□□□□□ -1.37
PDE4D-229ENST00000638939 PDE4BQ07343 736 aa6.52□□□□□ -1.37
PDE4D-229ENST00000638939 PWP2Q15269 919 aaKnown RBP6.52□□□□□ -1.37
PDE4D-229ENST00000638939 C16orf59Q7L2K0 433 aa6.52□□□□□ -1.37
PDE4D-229ENST00000638939 ZNF444Q8N0Y2 327 aaPredicted RBP6.52□□□□□ -1.37
PDE4D-229ENST00000638939 ATXN2LQ8WWM7 1075 aaKnown RBP6.52□□□□□ -1.37
PDE4D-229ENST00000638939 HERVK_113Q902F9 699 aa6.52□□□□□ -1.37
PDE4D-229ENST00000638939 CALR3Q96L12 384 aaKnown RBP6.52□□□□□ -1.37
PDE4D-229ENST00000638939 GAS2L1Q99501 681 aaPredicted RBP6.52□□□□□ -1.37
PDE4D-229ENST00000638939 PBX4Q9BYU1 374 aa6.52□□□□□ -1.37
PDE4D-229ENST00000638939 NACAP1Q9BZK3 213 aa6.52□□□□□ -1.37
PDE4D-229ENST00000638939 IL23AQ9NPF7 189 aa6.52□□□□□ -1.37
PDE4D-229ENST00000638939 RNF146Q9NTX7 359 aa6.52□□□□□ -1.37
PDE4D-229ENST00000638939 RCAN3Q9UKA8 241 aa6.52□□□□□ -1.37
PDE4D-229ENST00000638939 GNEQ9Y223 722 aaKnown RBP6.52□□□□□ -1.37
PDE4D-229ENST00000638939 Q9Y3F1 56 aa6.52□□□□□ -1.37
PDE4D-229ENST00000638939 SOWAHBA6NEL2 793 aa6.51□□□□□ -1.37
PDE4D-229ENST00000638939 TNFRSF10AO00220 468 aa6.51□□□□□ -1.37
PDE4D-229ENST00000638939 ERC2O15083 957 aa6.51□□□□□ -1.37
PDE4D-229ENST00000638939 SMARCA5O60264 1052 aaPredicted RBP6.51□□□□□ -1.37
PDE4D-229ENST00000638939 ZEB2O60315 1214 aa6.51□□□□□ -1.37
PDE4D-229ENST00000638939 PRDM1O75626 825 aa6.51□□□□□ -1.37
PDE4D-229ENST00000638939 PFKMP08237 780 aa6.51□□□□□ -1.37
PDE4D-229ENST00000638939 PBX2P40425 430 aa6.51□□□□□ -1.37
PDE4D-229ENST00000638939 SLC1A4P43007 532 aa6.51□□□□□ -1.37
PDE4D-229ENST00000638939 NOVP48745 357 aa6.51□□□□□ -1.37
PDE4D-229ENST00000638939 CNTN2Q02246 1040 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms