RNA–Protein interactions for RNA: ENST00000638139.1

SMARCA2-265, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 2,675 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-265ENST00000638139 ASIC1P78348 528 aa11.22□□□□□ -0.61
SMARCA2-265ENST00000638139 FIGNQ5HY92 759 aa11.22□□□□□ -0.61
SMARCA2-265ENST00000638139 KRT26Q7Z3Y9 468 aa11.22□□□□□ -0.61
SMARCA2-265ENST00000638139 SMCR8Q8TEV9 937 aaPredicted RBP11.22□□□□□ -0.61
SMARCA2-265ENST00000638139 CCDC47Q96A33 483 aaKnown RBP11.22□□□□□ -0.61
SMARCA2-265ENST00000638139 AK8Q96MA6 479 aa11.22□□□□□ -0.61
SMARCA2-265ENST00000638139 TCP11L1Q9NUJ3 509 aa11.22□□□□□ -0.61
SMARCA2-265ENST00000638139 AGPSO00116 658 aa11.22□□□□□ -0.61
SMARCA2-265ENST00000638139 OR52Z1P0C646 297 aa11.22□□□□□ -0.61
SMARCA2-265ENST00000638139 CLEC4GQ6UXB4 293 aa11.22□□□□□ -0.61
SMARCA2-265ENST00000638139 HPS3Q969F9 1004 aa11.22□□□□□ -0.61
SMARCA2-265ENST00000638139 CCDC42Q96M95 316 aa11.22□□□□□ -0.61
SMARCA2-265ENST00000638139 RSPH14Q9UHP6 348 aa11.22□□□□□ -0.61
SMARCA2-265ENST00000638139 SPA17Q15506 151 aa11.21□□□□□ -0.61
SMARCA2-265ENST00000638139 FKBP15Q5T1M5 1219 aa11.21□□□□□ -0.61
SMARCA2-265ENST00000638139 TMED8Q6PL24 325 aaPredicted RBP11.21□□□□□ -0.61
SMARCA2-265ENST00000638139 BICDL1Q6ZP65 573 aa11.21□□□□□ -0.61
SMARCA2-265ENST00000638139 CREG2Q8IUH2 290 aa11.21□□□□□ -0.61
SMARCA2-265ENST00000638139 KIAA0895Q8NCT3 520 aa11.21□□□□□ -0.61
SMARCA2-265ENST00000638139 CRACR2AQ9BSW2 395 aa11.21□□□□□ -0.61
SMARCA2-265ENST00000638139 TSGA10Q9BZW7 698 aa11.21□□□□□ -0.61
SMARCA2-265ENST00000638139 SEMA6BQ9H3T3 888 aa11.21□□□□□ -0.61
SMARCA2-265ENST00000638139 PLEKHA4Q9H4M7 779 aa11.21□□□□□ -0.61
SMARCA2-265ENST00000638139 SNX12Q9UMY4 172 aa11.21□□□□□ -0.61
SMARCA2-265ENST00000638139 COL16A1Q07092 1604 aaPredicted RBP11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 COL5A3P25940 1745 aaPredicted RBP11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 PALM3A6NDB9 673 aaPredicted RBP11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 CCNT1O60563 726 aaKnown RBP11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 GOLGA8HP0CJ92 632 aa11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 HNRNPH3P31942 346 aaKnown RBP11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 RPS8P62241 208 aaKnown RBP11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 CCDC96Q2M329 555 aa11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 LETM2Q2VYF4 491 aa11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 IQCEQ6IPM2 695 aa11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 TXNRD3Q86VQ6 643 aa11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 DZIP1Q86YF9 867 aaKnown RBP11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 FNBP4Q8N3X1 1017 aaPredicted RBP11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 MMGT1Q8N4V1 131 aa11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 AENQ8WTP8 325 aaKnown RBP11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 HINFPQ9BQA5 517 aa11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 MMTAG2Q9BU76 263 aaKnown RBP11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 CPVLQ9H3G5 476 aa11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 MLXIPQ9HAP2 919 aa11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 MKNK2Q9HBH9 465 aa11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 ARHGAP20Q9P2F6 1191 aa11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 JRKLQ9Y4A0 524 aa11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 PCDHA13Q9Y5I0 950 aa11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 CAPN6Q9Y6Q1 641 aa11.21□□□□□ -0.62
SMARCA2-265ENST00000638139 STRCQ7RTU9 1775 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 EPHB6O15197 1021 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 TSPY3P0CV98 308 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 TSPY8P0CW00 308 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 PPP1R2P41236 205 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 EZH2Q15910 746 aaKnown RBP11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 DDB1Q16531 1140 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 SLC10A5Q5PT55 438 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 MARCH10Q8NA82 808 aaPredicted RBP11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 TRIM58Q8NG06 486 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 SH3RF3Q8TEJ3 882 aaPredicted RBP11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 SMARCC1Q92922 1105 aaPredicted RBP11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 TMEM47Q9BQJ4 181 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 ZMYND12Q9H0C1 365 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 SH2D4AQ9H788 454 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 PLAGL2Q9UPG8 496 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 SIK3Q9Y2K2 1263 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 USO1O60763 962 aaKnown RBP11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 PPFIA4O75335 1185 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 TACC1O75410 805 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 MOCS3O95396 460 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 TECP42680 631 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 COBLL1Q53SF7 1204 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 ZNF572Q7Z3I7 529 aaPredicted RBP11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 KRT25Q7Z3Z0 450 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 SLC44A5Q8NCS7 719 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 HDAC7Q8WUI4 952 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 DRC1Q96MC2 740 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 IFIH1Q9BYX4 1025 aaKnown RBP11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 SLC39A2Q9NP94 309 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 FAM184BQ9ULE4 1060 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 ROBO3Q96MS0 1386 aa11.2□□□□□ -0.62
SMARCA2-265ENST00000638139 NAV1Q8NEY1 1877 aa11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 EIF4A3P38919 411 aaKnown RBP11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 KIF11P52732 1056 aa11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 NAPAP54920 295 aa11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 NONOQ15233 471 aaKnown RBP eCLIP11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 VWA3BQ502W6 1294 aa11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 CENPPQ6IPU0 288 aa11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 CNNM4Q6P4Q7 775 aa11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 C2CD5Q86YS7 1000 aa11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 LRRC1Q9BTT6 524 aa11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 ANKRD2Q9GZV1 360 aa11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 GOLGA6BA6NDN3 693 aa11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 KLRF2D3W0D1 207 aa11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 LCA5LO95447 670 aa11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 NT5C2P49902 561 aa11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 AMPD3Q01432 767 aa11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 MAPK8IP2Q13387 824 aaPredicted RBP11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 TBC1D9BQ66K14 1250 aa11.19□□□□□ -0.62
SMARCA2-265ENST00000638139 SPTY2D1Q68D10 685 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms