RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 PPP1R2P41236 205 aa20.76■□□□□ 0.91
CTSD-212ENST00000637815 GRB10Q13322 594 aa20.76■□□□□ 0.91
CTSD-212ENST00000637815 MTF1Q14872 753 aa20.76■□□□□ 0.91
CTSD-212ENST00000637815 TMEM266Q2M3C6 531 aa20.76■□□□□ 0.91
CTSD-212ENST00000637815 ZNF772Q68DY9 489 aaPredicted RBP20.76■□□□□ 0.91
CTSD-212ENST00000637815 NOC3LQ8WTT2 800 aaKnown RBP20.76■□□□□ 0.91
CTSD-212ENST00000637815 CPLX3Q8WVH0 158 aa20.76■□□□□ 0.91
CTSD-212ENST00000637815 EXOC1Q9NV70 894 aa20.76■□□□□ 0.91
CTSD-212ENST00000637815 PI4KBQ9UBF8 816 aa20.76■□□□□ 0.91
CTSD-212ENST00000637815 LRWD1Q9UFC0 647 aa20.76■□□□□ 0.91
CTSD-212ENST00000637815 PCDHAC2Q9Y5I4 1007 aa20.76■□□□□ 0.91
CTSD-212ENST00000637815 RAD9BQ6WBX8 426 aa20.75■□□□□ 0.91
CTSD-212ENST00000637815 KCTD1Q719H9 257 aa20.75■□□□□ 0.91
CTSD-212ENST00000637815 RAB34Q9BZG1 259 aa20.75■□□□□ 0.91
CTSD-212ENST00000637815 NYAP2Q9P242 653 aa20.75■□□□□ 0.91
CTSD-212ENST00000637815 DDTLA6NHG4 134 aaPredicted RBP20.75■□□□□ 0.91
CTSD-212ENST00000637815 USP17L10C9JJH3 530 aa20.75■□□□□ 0.91
CTSD-212ENST00000637815 SLURP2P0DP57 97 aa20.75■□□□□ 0.91
CTSD-212ENST00000637815 SLC16A2P36021 539 aa20.75■□□□□ 0.91
CTSD-212ENST00000637815 MRPL12P52815 198 aaKnown RBP20.75■□□□□ 0.91
CTSD-212ENST00000637815 ASIC1P78348 528 aa20.75■□□□□ 0.91
CTSD-212ENST00000637815 ATP2B2Q01814 1243 aa20.75■□□□□ 0.91
CTSD-212ENST00000637815 PDE4DQ08499 809 aa20.75■□□□□ 0.91
CTSD-212ENST00000637815 DESI2Q9BSY9 194 aa20.75■□□□□ 0.91
CTSD-212ENST00000637815 SERPINA10Q9UK55 444 aa20.75■□□□□ 0.91
CTSD-212ENST00000637815 ADGRG1Q9Y653 693 aa20.75■□□□□ 0.91
CTSD-212ENST00000637815 LGALS16A8MUM7 142 aa20.74■□□□□ 0.91
CTSD-212ENST00000637815 CCNE1P24864 410 aa20.74■□□□□ 0.91
CTSD-212ENST00000637815 TNNI2P48788 182 aa20.74■□□□□ 0.91
CTSD-212ENST00000637815 CACNB3P54284 484 aa20.74■□□□□ 0.91
CTSD-212ENST00000637815 UBE2SQ16763 222 aa20.74■□□□□ 0.91
CTSD-212ENST00000637815 TATDN1Q6P1N9 297 aa20.74■□□□□ 0.91
CTSD-212ENST00000637815 SH3BP5LQ7L8J4 393 aa20.74■□□□□ 0.91
CTSD-212ENST00000637815 DCAF4Q8WV16 495 aa20.74■□□□□ 0.91
CTSD-212ENST00000637815 TRIM47Q96LD4 638 aa20.74■□□□□ 0.91
CTSD-212ENST00000637815 PNMA5Q96PV4 448 aa20.74■□□□□ 0.91
CTSD-212ENST00000637815 DUSP9Q99956 384 aaKnown RBP20.74■□□□□ 0.91
CTSD-212ENST00000637815 SRRTQ9BXP5 876 aaKnown RBP20.74■□□□□ 0.91
CTSD-212ENST00000637815 KANSL2Q9H9L4 492 aa20.74■□□□□ 0.91
CTSD-212ENST00000637815 BLOC1S4Q9NUP1 217 aa20.74■□□□□ 0.91
CTSD-212ENST00000637815 A0A1W2PQC6 194 aa20.73■□□□□ 0.91
CTSD-212ENST00000637815 BICDL2A1A5D9 508 aa20.73■□□□□ 0.91
CTSD-212ENST00000637815 TCP10Q12799 353 aa20.73■□□□□ 0.91
CTSD-212ENST00000637815 CERKLQ49MI3 558 aaPredicted RBP20.73■□□□□ 0.91
CTSD-212ENST00000637815 ZNF507Q8TCN5 953 aa20.73■□□□□ 0.91
CTSD-212ENST00000637815 P2RX5Q93086 422 aa20.73■□□□□ 0.91
CTSD-212ENST00000637815 MRPL44Q9H9J2 332 aaKnown RBP20.73■□□□□ 0.91
CTSD-212ENST00000637815 ABHD10Q9NUJ1 306 aa20.73■□□□□ 0.91
CTSD-212ENST00000637815 EEF2P13639 858 aaKnown RBP20.73■□□□□ 0.91
CTSD-212ENST00000637815 GCFC2P16383 781 aaKnown RBP20.73■□□□□ 0.91
CTSD-212ENST00000637815 UBXN1Q04323 297 aa20.73■□□□□ 0.91
CTSD-212ENST00000637815 STK4Q13043 487 aa20.73■□□□□ 0.91
CTSD-212ENST00000637815 SV2BQ7L1I2 683 aa20.73■□□□□ 0.91
CTSD-212ENST00000637815 WDR24Q96S15 920 aa20.73■□□□□ 0.91
CTSD-212ENST00000637815 GLT8D2Q9H1C3 349 aa20.73■□□□□ 0.91
CTSD-212ENST00000637815 PSTPIP2Q9H939 334 aa20.73■□□□□ 0.91
CTSD-212ENST00000637815 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.73■□□□□ 0.916e-8■□□□□ 10.2
CTSD-212ENST00000637815 ATF5Q9Y2D1 282 aaPredicted RBP20.73■□□□□ 0.91
CTSD-212ENST00000637815 V9GYY5 206 aaPredicted RBP20.73■□□□□ 0.91
CTSD-212ENST00000637815 GNG11P61952 73 aa20.72■□□□□ 0.91
CTSD-212ENST00000637815 ELF2Q15723 593 aa20.72■□□□□ 0.91
CTSD-212ENST00000637815 CNNM4Q6P4Q7 775 aa20.72■□□□□ 0.91
CTSD-212ENST00000637815 TMTC1Q8IUR5 882 aa20.72■□□□□ 0.91
CTSD-212ENST00000637815 MB21D1Q8N884 522 aa20.72■□□□□ 0.91
CTSD-212ENST00000637815 C7orf43Q8WVR3 580 aa20.72■□□□□ 0.91
CTSD-212ENST00000637815 FAM196BA6NMK8 535 aa20.71■□□□□ 0.91
CTSD-212ENST00000637815 RBM5P52756 815 aaKnown RBP eCLIP20.71■□□□□ 0.91
CTSD-212ENST00000637815 CSGALNACT2Q8N6G5 542 aa20.71■□□□□ 0.91
CTSD-212ENST00000637815 LARP4BQ92615 738 aaKnown RBP20.71■□□□□ 0.91
CTSD-212ENST00000637815 CNKSR1Q969H4 720 aa20.71■□□□□ 0.91
CTSD-212ENST00000637815 KIFC2Q96AC6 838 aa20.71■□□□□ 0.91
CTSD-212ENST00000637815 ATRNL1Q5VV63 1379 aa20.71■□□□□ 0.91
CTSD-212ENST00000637815 COL2A1P02458 1487 aaPredicted RBP20.71■□□□□ 0.91
CTSD-212ENST00000637815 PVALEFA0A1B0GWK0 134 aa20.71■□□□□ 0.91
CTSD-212ENST00000637815 POTEMA6NI47 508 aa20.71■□□□□ 0.91
CTSD-212ENST00000637815 RNF225M0QZC1 329 aaPredicted RBP20.71■□□□□ 0.91
CTSD-212ENST00000637815 CASQ1P31415 396 aa20.71■□□□□ 0.91
CTSD-212ENST00000637815 TMEM119Q4V9L6 283 aa20.71■□□□□ 0.91
CTSD-212ENST00000637815 KIAA0895Q8NCT3 520 aa20.71■□□□□ 0.91
CTSD-212ENST00000637815 LRRN4CLQ8ND94 238 aa20.71■□□□□ 0.91
CTSD-212ENST00000637815 ZNF397Q8NF99 534 aaPredicted RBP20.71■□□□□ 0.91
CTSD-212ENST00000637815 CDK5RAP3Q96JB5 506 aa20.71■□□□□ 0.91
CTSD-212ENST00000637815 NUP88Q99567 741 aaPredicted RBP20.71■□□□□ 0.91
CTSD-212ENST00000637815 NAP1L4Q99733 375 aaKnown RBP20.71■□□□□ 0.91
CTSD-212ENST00000637815 MAGEC2Q9UBF1 373 aaPredicted RBP20.71■□□□□ 0.91
CTSD-212ENST00000637815 DDX25Q9UHL0 483 aaKnown RBP20.71■□□□□ 0.91
CTSD-212ENST00000637815 URI1O94763 535 aaPredicted RBP20.7■□□□□ 0.9
CTSD-212ENST00000637815 FCER1AP12319 257 aa20.7■□□□□ 0.9
CTSD-212ENST00000637815 SLC1A4P43007 532 aa20.7■□□□□ 0.9
CTSD-212ENST00000637815 SHROOM1Q2M3G4 852 aaPredicted RBP20.7■□□□□ 0.9
CTSD-212ENST00000637815 QRICH1Q2TAL8 776 aa20.7■□□□□ 0.9
CTSD-212ENST00000637815 TMEM179Q6ZVK1 233 aa20.7■□□□□ 0.9
CTSD-212ENST00000637815 SIAH1Q8IUQ4 282 aa20.7■□□□□ 0.9
CTSD-212ENST00000637815 CREBRFQ8IUR6 639 aa20.7■□□□□ 0.9
CTSD-212ENST00000637815 HAS1Q92839 578 aa20.7■□□□□ 0.9
CTSD-212ENST00000637815 MYMKA6NI61 221 aa20.7■□□□□ 0.9
CTSD-212ENST00000637815 HOXA7P31268 230 aaPredicted RBP20.7■□□□□ 0.9
CTSD-212ENST00000637815 DNM2P50570 870 aa20.7■□□□□ 0.9
CTSD-212ENST00000637815 ERVK-24P63145 666 aa20.7■□□□□ 0.9
CTSD-212ENST00000637815 MCM6Q14566 821 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms