RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 DDX49Q9Y6V7 483 aaKnown RBP16.71■□□□□ 0.27
CACNA1A-249ENST00000637777 PSMA5P28066 241 aa16.7■□□□□ 0.26
CACNA1A-249ENST00000637777 HSPA4P34932 840 aa16.7■□□□□ 0.26
CACNA1A-249ENST00000637777 ATN1P54259 1190 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-249ENST00000637777 COL9A3Q14050 684 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-249ENST00000637777 C7orf61Q8IZ16 206 aa16.7■□□□□ 0.26
CACNA1A-249ENST00000637777 LZTS2Q9BRK4 669 aa16.7■□□□□ 0.26
CACNA1A-249ENST00000637777 SNX14Q9Y5W7 946 aa16.7■□□□□ 0.26
CACNA1A-249ENST00000637777 CEP290O15078 2479 aa16.69■□□□□ 0.26
CACNA1A-249ENST00000637777 C6orf222P0C671 652 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-249ENST00000637777 CPA1P15085 419 aa16.69■□□□□ 0.26
CACNA1A-249ENST00000637777 CASTP20810 708 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-249ENST00000637777 LRRC41Q15345 812 aa16.69■□□□□ 0.26
CACNA1A-249ENST00000637777 TSGA10IPQ3SY00 556 aa16.69■□□□□ 0.26
CACNA1A-249ENST00000637777 CCDC82Q8N4S0 544 aa16.69■□□□□ 0.26
CACNA1A-249ENST00000637777 FERMT2Q96AC1 680 aa16.69■□□□□ 0.26
CACNA1A-249ENST00000637777 MAP3K14Q99558 947 aa16.69■□□□□ 0.26
CACNA1A-249ENST00000637777 RIOX1Q9H6W3 641 aa16.69■□□□□ 0.26
CACNA1A-249ENST00000637777 LRRC37A2A6NM11 1700 aa16.68■□□□□ 0.26
CACNA1A-249ENST00000637777 PNMA6FA0A0J9YX94 578 aa16.68■□□□□ 0.26
CACNA1A-249ENST00000637777 KLF18A0A0U1RQI7 1052 aa16.68■□□□□ 0.26
CACNA1A-249ENST00000637777 ZBTB43O43298 467 aa16.68■□□□□ 0.26
CACNA1A-249ENST00000637777 PLEKHA8P1O95397 391 aa16.68■□□□□ 0.26
CACNA1A-249ENST00000637777 ADCYAP1R1P41586 468 aa16.68■□□□□ 0.26
CACNA1A-249ENST00000637777 MNX1P50219 401 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-249ENST00000637777 TNFAIP2Q03169 654 aa16.68■□□□□ 0.26
CACNA1A-249ENST00000637777 ARHGEF16Q5VV41 709 aa16.68■□□□□ 0.26
CACNA1A-249ENST00000637777 CMTR1Q8N1G2 835 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-249ENST00000637777 VTA1Q9NP79 307 aa16.68■□□□□ 0.26
CACNA1A-249ENST00000637777 ALPK3Q96L96 1907 aa16.68■□□□□ 0.26
CACNA1A-249ENST00000637777 ASTN1O14525 1302 aa16.68■□□□□ 0.26
CACNA1A-249ENST00000637777 SYNRGQ9UMZ2 1314 aa16.68■□□□□ 0.26
CACNA1A-249ENST00000637777 GOLGA8AA7E2F4 631 aa16.67■□□□□ 0.26
CACNA1A-249ENST00000637777 GOLGA8BA8MQT2 603 aa16.67■□□□□ 0.26
CACNA1A-249ENST00000637777 H0YGN5 161 aa16.67■□□□□ 0.26
CACNA1A-249ENST00000637777 CYTH3O43739 400 aa16.67■□□□□ 0.26
CACNA1A-249ENST00000637777 DUSP11O75319 330 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-249ENST00000637777 RTN1Q16799 776 aa16.67■□□□□ 0.26
CACNA1A-249ENST00000637777 APOA5Q6Q788 366 aa16.67■□□□□ 0.26
CACNA1A-249ENST00000637777 Q6ZUG5 572 aa16.67■□□□□ 0.26
CACNA1A-249ENST00000637777 SGMS1Q86VZ5 419 aa16.67■□□□□ 0.26
CACNA1A-249ENST00000637777 FANCBQ8NB91 859 aa16.67■□□□□ 0.26
CACNA1A-249ENST00000637777 RGS22Q8NE09 1264 aa16.67■□□□□ 0.26
CACNA1A-249ENST00000637777 DNERQ8NFT8 737 aa16.67■□□□□ 0.26
CACNA1A-249ENST00000637777 TBC1D5Q92609 795 aa16.67■□□□□ 0.26
CACNA1A-249ENST00000637777 VTI1AQ96AJ9 217 aa16.67■□□□□ 0.26
CACNA1A-249ENST00000637777 MTMR8Q96EF0 704 aa16.67■□□□□ 0.26
CACNA1A-249ENST00000637777 RMDN3Q96TC7 470 aa16.67■□□□□ 0.26
CACNA1A-249ENST00000637777 SPZ1Q9BXG8 430 aa16.67■□□□□ 0.26
CACNA1A-249ENST00000637777 AP5M1Q9H0R1 490 aa16.67■□□□□ 0.26
CACNA1A-249ENST00000637777 RBM28Q9NW13 759 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-249ENST00000637777 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-249ENST00000637777 PPP1R11O60927 126 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-249ENST00000637777 EIF2AK2P19525 551 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-249ENST00000637777 EXOSC10Q01780 885 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-249ENST00000637777 TLK2Q86UE8 772 aa16.66■□□□□ 0.26
CACNA1A-249ENST00000637777 SYTL5Q8TDW5 730 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-249ENST00000637777 NSUN6Q8TEA1 469 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-249ENST00000637777 PDGFCQ9NRA1 345 aa16.66■□□□□ 0.26
CACNA1A-249ENST00000637777 ATP11BQ9Y2G3 1177 aa16.66■□□□□ 0.26
CACNA1A-249ENST00000637777 LOC102724159A0A0B4J2E5 919 aa16.65■□□□□ 0.26
CACNA1A-249ENST00000637777 hCG_1642624A0A1W2PR95 340 aa16.65■□□□□ 0.26
CACNA1A-249ENST00000637777 GCOM1H8Y6P7 765 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-249ENST00000637777 POLR2MP0CAP2 368 aa16.65■□□□□ 0.26
CACNA1A-249ENST00000637777 COL6A1P12109 1028 aa16.65■□□□□ 0.26
CACNA1A-249ENST00000637777 RPS6KB1P23443 525 aa16.65■□□□□ 0.26
CACNA1A-249ENST00000637777 HOXA13P31271 388 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-249ENST00000637777 APOBRQ0VD83 1088 aa16.65■□□□□ 0.26
CACNA1A-249ENST00000637777 PWP2Q15269 919 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-249ENST00000637777 LRRC26Q2I0M4 334 aa16.65■□□□□ 0.26
CACNA1A-249ENST00000637777 SLC35G1Q2M3R5 365 aa16.65■□□□□ 0.26
CACNA1A-249ENST00000637777 TMTC3Q6ZXV5 915 aa16.65■□□□□ 0.26
CACNA1A-249ENST00000637777 FCHSD1Q86WN1 690 aa16.65■□□□□ 0.26
CACNA1A-249ENST00000637777 SRBD1Q8N5C6 995 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-249ENST00000637777 BRF1Q92994 677 aa16.65■□□□□ 0.26
CACNA1A-249ENST00000637777 CUL5Q93034 780 aa16.65■□□□□ 0.26
CACNA1A-249ENST00000637777 TAAR1Q96RJ0 339 aa16.65■□□□□ 0.26
CACNA1A-249ENST00000637777 ZMYND8Q9ULU4 1186 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-249ENST00000637777 DYNC1LI2O43237 492 aaPredicted RBP16.64■□□□□ 0.25
CACNA1A-249ENST00000637777 EPB41L2O43491 1005 aaKnown RBP16.64■□□□□ 0.25
CACNA1A-249ENST00000637777 EIF5BO60841 1220 aaKnown RBP16.64■□□□□ 0.25
CACNA1A-249ENST00000637777 METAP2P50579 478 aaKnown RBP eCLIP16.64■□□□□ 0.25
CACNA1A-249ENST00000637777 PPP2R5BQ15173 497 aa16.64■□□□□ 0.25
CACNA1A-249ENST00000637777 GNASQ5JWF2 1037 aa16.64■□□□□ 0.25
CACNA1A-249ENST00000637777 IQSEC1Q6DN90 963 aa16.64■□□□□ 0.25
CACNA1A-249ENST00000637777 HEATR3Q7Z4Q2 680 aa16.64■□□□□ 0.25
CACNA1A-249ENST00000637777 PCSK9Q8NBP7 692 aaKnown RBP16.64■□□□□ 0.25
CACNA1A-249ENST00000637777 KCNB2Q92953 911 aa16.64■□□□□ 0.25
CACNA1A-249ENST00000637777 USP26Q9BXU7 913 aa16.64■□□□□ 0.25
CACNA1A-249ENST00000637777 WDR11Q9BZH6 1224 aa16.64■□□□□ 0.25
CACNA1A-249ENST00000637777 KATNBL1Q9H079 304 aa16.64■□□□□ 0.25
CACNA1A-249ENST00000637777 PRKAG2Q9UGJ0 569 aa16.64■□□□□ 0.25
CACNA1A-249ENST00000637777 BRPF3Q9ULD4 1205 aa16.64■□□□□ 0.25
CACNA1A-249ENST00000637777 CYP46A1Q9Y6A2 500 aa16.64■□□□□ 0.25
CACNA1A-249ENST00000637777 MYADML2A6NDP7 307 aa16.63■□□□□ 0.25
CACNA1A-249ENST00000637777 ADCY6O43306 1168 aa16.63■□□□□ 0.25
CACNA1A-249ENST00000637777 ZEB2O60315 1214 aa16.63■□□□□ 0.25
CACNA1A-249ENST00000637777 ADAMTS4O75173 837 aa16.63■□□□□ 0.25
CACNA1A-249ENST00000637777 MYCLP12524 364 aaPredicted RBP16.63■□□□□ 0.25
CACNA1A-249ENST00000637777 SMPD1P17405 629 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms