RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 PNMA2Q9UL42 364 aa14.79□□□□□ -0.04
CTSD-208ENST00000636843 SDSP20132 328 aa14.78□□□□□ -0.04
CTSD-208ENST00000636843 ITGA7Q13683 1181 aa14.78□□□□□ -0.04
CTSD-208ENST00000636843 NBR1Q14596 966 aa14.78□□□□□ -0.04
CTSD-208ENST00000636843 GRIN2CQ14957 1233 aa14.78□□□□□ -0.04
CTSD-208ENST00000636843 ZNF365Q70YC5 407 aa14.78□□□□□ -0.04
CTSD-208ENST00000636843 RASGRP2Q7LDG7 609 aa14.78□□□□□ -0.04
CTSD-208ENST00000636843 FBXO16Q8IX29 292 aaPredicted RBP14.78□□□□□ -0.04
CTSD-208ENST00000636843 TMEM47Q9BQJ4 181 aa14.78□□□□□ -0.04
CTSD-208ENST00000636843 IL23AQ9NPF7 189 aa14.78□□□□□ -0.04
CTSD-208ENST00000636843 PDGFCQ9NRA1 345 aa14.78□□□□□ -0.04
CTSD-208ENST00000636843 ZMYM6O95789 1325 aa14.78□□□□□ -0.04
CTSD-208ENST00000636843 PCP11498 1178 aaKnown RBP14.77□□□□□ -0.04
CTSD-208ENST00000636843 CYP2C18P33260 490 aa14.77□□□□□ -0.04
CTSD-208ENST00000636843 SLC16A2P36021 539 aa14.77□□□□□ -0.04
CTSD-208ENST00000636843 BAATQ14032 418 aaPredicted RBP14.77□□□□□ -0.04
CTSD-208ENST00000636843 RRP12Q5JTH9 1297 aaKnown RBP14.77□□□□□ -0.04
CTSD-208ENST00000636843 TTBK2Q6IQ55 1244 aa14.77□□□□□ -0.04
CTSD-208ENST00000636843 KIAA1211Q6ZU35 1233 aa14.77□□□□□ -0.04
CTSD-208ENST00000636843 EEPD1Q7L9B9 569 aa14.77□□□□□ -0.04
CTSD-208ENST00000636843 FAM227BQ96M60 508 aa14.77□□□□□ -0.04
CTSD-208ENST00000636843 MTIF3Q9H2K0 278 aaKnown RBP14.77□□□□□ -0.04
CTSD-208ENST00000636843 HIPK3Q9H422 1215 aa14.77□□□□□ -0.04
CTSD-208ENST00000636843 A0A0D9SFI3 127 aa14.76□□□□□ -0.05
CTSD-208ENST00000636843 ACRP10323 421 aa14.76□□□□□ -0.05
CTSD-208ENST00000636843 HSPD1P10809 573 aaKnown RBP14.76□□□□□ -0.05
CTSD-208ENST00000636843 DUSP28Q4G0W2 176 aa14.76□□□□□ -0.05
CTSD-208ENST00000636843 HERVK_113Q902F9 699 aa14.76□□□□□ -0.05
CTSD-208ENST00000636843 SNX21Q969T3 373 aa14.76□□□□□ -0.05
CTSD-208ENST00000636843 TTC14Q96N46 770 aa14.76□□□□□ -0.05
CTSD-208ENST00000636843 DDX49Q9Y6V7 483 aaKnown RBP14.76□□□□□ -0.05
CTSD-208ENST00000636843 GRIN2DO15399 1336 aa14.76□□□□□ -0.05
CTSD-208ENST00000636843 FGBP02675 491 aa14.76□□□□□ -0.05
CTSD-208ENST00000636843 ALDH5A1P51649 535 aaPredicted RBP14.76□□□□□ -0.05
CTSD-208ENST00000636843 PBX4Q9BYU1 374 aa14.76□□□□□ -0.05
CTSD-208ENST00000636843 GPCPD1Q9NPB8 672 aa14.76□□□□□ -0.05
CTSD-208ENST00000636843 RBM47A0AV96 593 aaKnown RBP14.75□□□□□ -0.05
CTSD-208ENST00000636843 PTPDC1A2A3K4 754 aa14.75□□□□□ -0.05
CTSD-208ENST00000636843 NFIBO00712 420 aa14.75□□□□□ -0.05
CTSD-208ENST00000636843 PDHBP11177 359 aa14.75□□□□□ -0.05
CTSD-208ENST00000636843 PTGS1P23219 599 aa14.75□□□□□ -0.05
CTSD-208ENST00000636843 NMIQ13287 307 aaPredicted RBP14.75□□□□□ -0.05
CTSD-208ENST00000636843 RAB30Q15771 203 aa14.75□□□□□ -0.05
CTSD-208ENST00000636843 AKNAD1Q5T1N1 836 aa14.75□□□□□ -0.05
CTSD-208ENST00000636843 MFSD6Q6ZSS7 791 aa14.75□□□□□ -0.05
CTSD-208ENST00000636843 ZNF589Q86UQ0 364 aaPredicted RBP14.75□□□□□ -0.05
CTSD-208ENST00000636843 HSCBQ8IWL3 235 aa14.75□□□□□ -0.05
CTSD-208ENST00000636843 PURBQ96QR8 312 aaKnown RBP14.75□□□□□ -0.05
CTSD-208ENST00000636843 MPHOSPH6Q99547 160 aaKnown RBP14.75□□□□□ -0.05
CTSD-208ENST00000636843 NOC4LQ9BVI4 516 aaKnown RBP14.75□□□□□ -0.05
CTSD-208ENST00000636843 RNF41Q9H4P4 317 aaPredicted RBP14.75□□□□□ -0.05
CTSD-208ENST00000636843 POLR3EQ9NVU0 708 aa14.75□□□□□ -0.05
CTSD-208ENST00000636843 MSRAQ9UJ68 235 aa14.75□□□□□ -0.05
CTSD-208ENST00000636843 FRMPD2Q68DX3 1309 aaPredicted RBP14.75□□□□□ -0.05
CTSD-208ENST00000636843 GRXCR1A8MXD5 290 aa14.74□□□□□ -0.05
CTSD-208ENST00000636843 B4GALT4O60513 344 aa14.74□□□□□ -0.05
CTSD-208ENST00000636843 REC8O95072 547 aa14.74□□□□□ -0.05
CTSD-208ENST00000636843 PBX2P40425 430 aa14.74□□□□□ -0.05
CTSD-208ENST00000636843 HAND2P61296 217 aa14.74□□□□□ -0.05
CTSD-208ENST00000636843 ZNF543Q08ER8 600 aa14.74□□□□□ -0.05
CTSD-208ENST00000636843 TMEM63BQ5T3F8 832 aa14.74□□□□□ -0.05
CTSD-208ENST00000636843 RPUSD2Q8IZ73 545 aaKnown RBP14.74□□□□□ -0.05
CTSD-208ENST00000636843 CLEC4DQ8WXI8 215 aa14.74□□□□□ -0.05
CTSD-208ENST00000636843 SYMPKQ92797 1274 aaKnown RBP14.74□□□□□ -0.05
CTSD-208ENST00000636843 GAS2L1Q99501 681 aaPredicted RBP14.74□□□□□ -0.05
CTSD-208ENST00000636843 WDR11Q9BZH6 1224 aa14.74□□□□□ -0.05
CTSD-208ENST00000636843 TRPV6Q9H1D0 765 aa14.74□□□□□ -0.05
CTSD-208ENST00000636843 CCDC171Q6TFL3 1326 aa14.74□□□□□ -0.05
CTSD-208ENST00000636843 WDR19Q8NEZ3 1342 aa14.74□□□□□ -0.05
CTSD-208ENST00000636843 LRRC37A2A6NM11 1700 aa14.73□□□□□ -0.05
CTSD-208ENST00000636843 TRIM6-TRIM34B2RNG4 842 aa14.73□□□□□ -0.05
CTSD-208ENST00000636843 NKRFO15226 690 aaKnown RBP eCLIP14.73□□□□□ -0.058e-7■■■□□ 18.5
CTSD-208ENST00000636843 SUPT20HL2P0C7V6 817 aa14.73□□□□□ -0.05
CTSD-208ENST00000636843 SNHG28P0DPA3 235 aa14.73□□□□□ -0.05
CTSD-208ENST00000636843 NT5C2P49902 561 aa14.73□□□□□ -0.05
CTSD-208ENST00000636843 CPT1AP50416 773 aa14.73□□□□□ -0.05
CTSD-208ENST00000636843 PSMC6P62333 389 aa14.73□□□□□ -0.05
CTSD-208ENST00000636843 BRDTQ58F21 947 aaPredicted RBP14.73□□□□□ -0.05
CTSD-208ENST00000636843 RNF207Q6ZRF8 634 aa14.73□□□□□ -0.05
CTSD-208ENST00000636843 DNERQ8NFT8 737 aa14.73□□□□□ -0.05
CTSD-208ENST00000636843 ALDH8A1Q9H2A2 487 aaPredicted RBP14.73□□□□□ -0.05
CTSD-208ENST00000636843 PRUNE2Q8WUY3 3088 aa14.73□□□□□ -0.05
CTSD-208ENST00000636843 EYSQ5T1H1 3165 aa14.73□□□□□ -0.05
CTSD-208ENST00000636843 CDH23Q9H251 3354 aa14.72□□□□□ -0.05
CTSD-208ENST00000636843 B4DLN1 442 aa14.72□□□□□ -0.05
CTSD-208ENST00000636843 CALML3P27482 149 aa14.72□□□□□ -0.05
CTSD-208ENST00000636843 MRPL12P52815 198 aaKnown RBP14.72□□□□□ -0.05
CTSD-208ENST00000636843 CCL23P55773 120 aa14.72□□□□□ -0.05
CTSD-208ENST00000636843 PDE4DQ08499 809 aa14.72□□□□□ -0.05
CTSD-208ENST00000636843 GPATCH4Q5T3I0 446 aaKnown RBP14.72□□□□□ -0.05
CTSD-208ENST00000636843 RILPL2Q969X0 211 aa14.72□□□□□ -0.05
CTSD-208ENST00000636843 MAF1Q9H063 256 aa14.72□□□□□ -0.05
CTSD-208ENST00000636843 GPHNQ9NQX3 736 aaPredicted RBP14.72□□□□□ -0.05
CTSD-208ENST00000636843 UMODL1Q5DID0 1318 aa14.72□□□□□ -0.05
CTSD-208ENST00000636843 KPNA6O60684 536 aa14.71□□□□□ -0.05
CTSD-208ENST00000636843 EDNRBP24530 442 aa14.71□□□□□ -0.05
CTSD-208ENST00000636843 RPS6P62753 249 aaKnown RBP14.71□□□□□ -0.05
CTSD-208ENST00000636843 PURAQ00577 322 aaKnown RBP14.71□□□□□ -0.05
CTSD-208ENST00000636843 CCDC178Q5BJE1 867 aa14.71□□□□□ -0.05
CTSD-208ENST00000636843 SLC30A10Q6XR72 485 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms