RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 SYMPKQ92797 1274 aaKnown RBP-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 HAS1Q92839 578 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 SLC10A4Q96EP9 437 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 KLHDC7BQ96G42 594 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 FAM89AQ96GI7 184 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 LCORQ96JN0 433 aaPredicted RBP-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 GNRHR2Q96P88 292 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 BHMT2Q9H2M3 363 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 SUGCTQ9HAC7 445 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 ARHGEF10LQ9HCE6 1279 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 CD93Q9NPY3 652 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 CEP72Q9P209 647 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 KANSL3Q9P2N6 904 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 CELA1Q9UNI1 258 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 MAPK8IP1Q9UQF2 711 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 MTO1Q9Y2Z2 717 aaKnown RBP-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 DAGLAQ9Y4D2 1042 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 NCOR2Q9Y618 2525 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 KMT2AQ03164 3969 aa-0.54□□□□□ -2.5
CDKL5-210ENST00000636046 NID2Q14112 1375 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 A0A0B4J293 547 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 A0A0G2JLM5 398 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 WIPF3A6NGB9 483 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 LRRC3CA6NJW4 275 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 DDX11L8A8MPP1 907 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 UGDHO60701 494 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 OAZ2O95190 189 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 PRR35P0CG20 571 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 CD46P15529 392 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 TATP17735 454 aaPredicted RBP-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 ITPKAP23677 461 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 HOXA11P31270 313 aaPredicted RBP-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 CXCR5P32302 372 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 CDKN2AP42771 156 aaKnown RBP-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 PRIM1P49642 420 aaKnown RBP-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 RPL36AP83881 106 aaKnown RBP-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 TMEM62Q0P6H9 643 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 NR0B2Q15466 257 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 TARBP2Q15633 366 aaKnown RBP-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 CCDC6Q16204 474 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 ZNF484Q5JVG2 852 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 ZNF618Q5T7W0 954 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 NBPF6Q5VWK0 638 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 C9orf131Q5VYM1 1079 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 TTC19Q6DKK2 380 aaPredicted RBP-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 MCTP2Q6DN12 878 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 TMEM64Q6YI46 380 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 BICDL1Q6ZP65 573 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 Q6ZSN1 163 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 SH3BP5LQ7L8J4 393 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 GTSCR1Q86UQ5 136 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 SLC15A3Q8IY34 581 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 KREMEN2Q8NCW0 462 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 GIMAP8Q8ND71 665 aaPredicted RBP-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 PXYLP1Q8TE99 480 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 RHBDD1Q8TEB9 315 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 CASKIN2Q8WXE0 1202 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 PLD4Q96BZ4 506 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 RNF31Q96EP0 1072 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 VCPIP1Q96JH7 1222 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 NBPF4Q96M43 638 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 PNMA5Q96PV4 448 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 OCSTAMPQ9BR26 566 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 MLST8Q9BVC4 326 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 TMPRSS13Q9BYE2 586 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 CYP4F11Q9HBI6 524 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 SEC31BQ9NQW1 1179 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 PLSCR4Q9NRQ2 329 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 SPATA6Q9NWH7 488 aaPredicted RBP-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 TRMT1Q9NXH9 659 aaKnown RBP-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 FAM30AQ9NZY2 134 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 TMEFF2Q9UIK5 374 aaPredicted RBP-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 TINAGQ9UJW2 476 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 BTBD3Q9Y2F9 522 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 FAN1Q9Y2M0 1017 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 ACTL7BQ9Y614 415 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 ADGRG1Q9Y653 693 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 CREBBPQ92793 2442 aa-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 ARHGEF17Q96PE2 2063 aaPredicted RBP-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 COL11A2P13942 1736 aaPredicted RBP-0.55□□□□□ -2.5
CDKL5-210ENST00000636046 STARD9Q9P2P6 4700 aa-0.56□□□□□ -2.5
CDKL5-210ENST00000636046 COL1A2P08123 1366 aa-0.56□□□□□ -2.5
CDKL5-210ENST00000636046 COL16A1Q07092 1604 aaPredicted RBP-0.56□□□□□ -2.5
CDKL5-210ENST00000636046 GAKO14976 1311 aa-0.56□□□□□ -2.5
CDKL5-210ENST00000636046 SOS1Q07889 1333 aaPredicted RBP-0.56□□□□□ -2.5
CDKL5-210ENST00000636046 PRR23AA6NEV1 266 aa-0.56□□□□□ -2.5
CDKL5-210ENST00000636046 SRRM3A6NNA2 597 aaPredicted RBP-0.56□□□□□ -2.5
CDKL5-210ENST00000636046 GNAT3A8MTJ3 354 aa-0.56□□□□□ -2.5
CDKL5-210ENST00000636046 TNFRSF10CO14798 259 aa-0.56□□□□□ -2.5
CDKL5-210ENST00000636046 LATO43561 262 aa-0.56□□□□□ -2.5
CDKL5-210ENST00000636046 SLC28A2O43868 658 aa-0.56□□□□□ -2.5
CDKL5-210ENST00000636046 B4GALT4O60513 344 aa-0.56□□□□□ -2.5
CDKL5-210ENST00000636046 SRSF10O75494 262 aaKnown RBP-0.56□□□□□ -2.5
CDKL5-210ENST00000636046 SNAI1O95863 264 aaPredicted RBP-0.56□□□□□ -2.5
CDKL5-210ENST00000636046 EFEMP2O95967 443 aa-0.56□□□□□ -2.5
CDKL5-210ENST00000636046 EGFP01133 1207 aa-0.56□□□□□ -2.5
CDKL5-210ENST00000636046 ZGLP1P0C6A0 271 aa-0.56□□□□□ -2.5
CDKL5-210ENST00000636046 HKR1P10072 659 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms