RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 KDM7AQ6ZMT4 941 aa16.45■□□□□ 0.22
CACNA1A-220ENST00000635988 YTHDF3Q7Z739 585 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-220ENST00000635988 CCDC84Q86UT8 332 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-220ENST00000635988 TSEN2Q8NCE0 465 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-220ENST00000635988 C1orf131Q8NDD1 294 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-220ENST00000635988 AK8Q96MA6 479 aa16.45■□□□□ 0.22
CACNA1A-220ENST00000635988 MEFVO15553 781 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 PJA2O43164 708 aa16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 AKR1B10O60218 316 aa16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 MOCS3O95396 460 aa16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 CHRM1P11229 460 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 PDE4DQ08499 809 aa16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 PAK2Q13177 524 aa16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 CFAP221Q4G0U5 840 aa16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 CFAP58Q5T655 872 aa16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 GALNT17Q6IS24 598 aa16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 TYW1BQ6NUM6 668 aa16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 KRT26Q7Z3Y9 468 aa16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 C2CD5Q86YS7 1000 aa16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 RNF10Q8N5U6 811 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 PIGBQ92521 554 aa16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 ARL8AQ96BM9 186 aa16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 ARHGAP20Q9P2F6 1191 aa16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 ABCF2Q9UG63 623 aa16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 SRRM3A6NNA2 597 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 FSBPO95073 299 aa16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 CYP19A1P11511 503 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 MATR3P43243 847 aaKnown RBP eCLIP16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 GSCP56915 257 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 AMPD3Q01432 767 aa16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 SLC7A5Q01650 507 aa16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 SMCR8Q8TEV9 937 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 MLXIPQ9HAP2 919 aa16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 RREB1Q92766 1687 aa16.44■□□□□ 0.22
CACNA1A-220ENST00000635988 COL5A2P05997 1499 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 NFRKBQ6P4R8 1299 aa16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 RPAINQ86UA6 219 aa16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 CD302Q8IX05 232 aa16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 MREGQ8N565 214 aa16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 ZIM3Q96PE6 472 aa16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 TCP11L1Q9NUJ3 509 aa16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 SHANK3Q9BYB0 1731 aa16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 ABCB11O95342 1321 aa16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 FGFR1OPO95684 399 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 EIF4A3P38919 411 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 MAGEA1P43355 309 aa16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 CCDC152Q4G0S7 254 aa16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 CNNM4Q6P4Q7 775 aa16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 DZIP3Q86Y13 1208 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 IQCKQ8N0W5 287 aa16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 CABS1Q96KC9 395 aa16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 NOX5Q96PH1 765 aa16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 C7orf25Q9BPX7 421 aa16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 TRIM9Q9C026 710 aa16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 EPN3Q9H201 632 aa16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 GDF3Q9NR23 364 aa16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 GGA2Q9UJY4 613 aa16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 SAMM50Q9Y512 469 aa16.43■□□□□ 0.22
CACNA1A-220ENST00000635988 H0YHG0 523 aa16.42■□□□□ 0.22
CACNA1A-220ENST00000635988 PDCLQ13371 301 aa16.42■□□□□ 0.22
CACNA1A-220ENST00000635988 VWA3BQ502W6 1294 aa16.42■□□□□ 0.22
CACNA1A-220ENST00000635988 FBXW10Q5XX13 1052 aa16.42■□□□□ 0.22
CACNA1A-220ENST00000635988 ARHGAP27Q6ZUM4 889 aa16.42■□□□□ 0.22
CACNA1A-220ENST00000635988 EDEM3Q9BZQ6 932 aa16.42■□□□□ 0.22
CACNA1A-220ENST00000635988 CAPN7Q9Y6W3 813 aa16.42■□□□□ 0.22
CACNA1A-220ENST00000635988 CYP2D7A0A087X1C5 515 aa16.42■□□□□ 0.22
CACNA1A-220ENST00000635988 SMIM22K7EJ46 135 aa16.42■□□□□ 0.22
CACNA1A-220ENST00000635988 PLEKP08567 350 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-220ENST00000635988 IL6STP40189 918 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-220ENST00000635988 KCNV1Q6PIU1 500 aa16.42■□□□□ 0.22
CACNA1A-220ENST00000635988 DAGLBQ8NCG7 672 aa16.42■□□□□ 0.22
CACNA1A-220ENST00000635988 HINFPQ9BQA5 517 aa16.42■□□□□ 0.22
CACNA1A-220ENST00000635988 A1CFQ9NQ94 594 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-220ENST00000635988 SIK3Q9Y2K2 1263 aa16.42■□□□□ 0.22
CACNA1A-220ENST00000635988 TOGARAM1Q9Y4F4 1720 aa16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 ZNF804BA4D1E1 1349 aa16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 PP2D1A8MPX8 630 aa16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 LSP1P33241 339 aa16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 NT5C2P49902 561 aa16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 ASIC1P78348 528 aa16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 DDR1Q08345 913 aa16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 CCDC178Q5BJE1 867 aa16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 TTC19Q6DKK2 380 aaPredicted RBP16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 CADPS2Q86UW7 1296 aa16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 CABP7Q86V35 215 aa16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 RABEP2Q9H5N1 569 aa16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 LUC7LQ9NQ29 371 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 FAM205AQ6ZU69 1335 aa16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 SSU72P8A0A1W2PR75 194 aa16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 USP17L12C9JPN9 530 aa16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 USP17L21D6R901 530 aa16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 M0R2N6 131 aa16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 HOXA7P31268 230 aaPredicted RBP16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 FNTAP49354 379 aa16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 GNAQP50148 359 aa16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 WHAMMQ8TF30 809 aa16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 TACO1Q9BSH4 297 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-220ENST00000635988 TLR10Q9BXR5 811 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms