RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 TLE2Q04725 743 aa21.27■■□□□ 1
CLN6-210ENST00000635747 PDE4DQ08499 809 aa21.27■■□□□ 1
CLN6-210ENST00000635747 TMEM67Q5HYA8 995 aa21.27■■□□□ 1
CLN6-210ENST00000635747 STOX1Q6ZVD7 989 aa21.27■■□□□ 1
CLN6-210ENST00000635747 EEPD1Q7L9B9 569 aa21.27■■□□□ 1
CLN6-210ENST00000635747 CATIPQ7Z7H3 387 aa21.27■■□□□ 1
CLN6-210ENST00000635747 FBXO16Q8IX29 292 aaPredicted RBP21.27■■□□□ 1
CLN6-210ENST00000635747 MB21D2Q8IYB1 491 aaPredicted RBP21.27■■□□□ 1
CLN6-210ENST00000635747 TDHQ8IZJ6 230 aa21.27■■□□□ 1
CLN6-210ENST00000635747 STAG2Q8N3U4 1231 aa21.27■■□□□ 1
CLN6-210ENST00000635747 TOX2Q96NM4 488 aa21.27■■□□□ 1
CLN6-210ENST00000635747 PURBQ96QR8 312 aaKnown RBP21.27■■□□□ 1
CLN6-210ENST00000635747 ANO2Q9NQ90 1003 aa21.27■■□□□ 1
CLN6-210ENST00000635747 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.26■□□□□ 0.99
CLN6-210ENST00000635747 GRM4Q14833 912 aa21.26■□□□□ 0.99
CLN6-210ENST00000635747 TLK2Q86UE8 772 aa21.26■□□□□ 0.99
CLN6-210ENST00000635747 TMTC2Q8N394 836 aa21.26■□□□□ 0.99
CLN6-210ENST00000635747 IGDCC4Q8TDY8 1250 aa21.26■□□□□ 0.99
CLN6-210ENST00000635747 VTI1AQ96AJ9 217 aa21.26■□□□□ 0.99
CLN6-210ENST00000635747 AMNQ9BXJ7 453 aa21.26■□□□□ 0.99
CLN6-210ENST00000635747 PRDM5Q9NQX1 630 aaPredicted RBP21.26■□□□□ 0.99
CLN6-210ENST00000635747 TAF6LQ9Y6J9 622 aa21.26■□□□□ 0.99
CLN6-210ENST00000635747 MCM3APO60318 1980 aa21.26■□□□□ 0.99
CLN6-210ENST00000635747 MROH7Q68CQ1 1323 aa21.26■□□□□ 0.99
CLN6-210ENST00000635747 MYADML2A6NDP7 307 aa21.25■□□□□ 0.99
CLN6-210ENST00000635747 DCDC2CA8MYV0 355 aa21.25■□□□□ 0.99
CLN6-210ENST00000635747 ZBTB5O15062 677 aa21.25■□□□□ 0.99
CLN6-210ENST00000635747 DYNC1LI2O43237 492 aaPredicted RBP21.25■□□□□ 0.99
CLN6-210ENST00000635747 CABYRO75952 493 aa21.25■□□□□ 0.99
CLN6-210ENST00000635747 SMPD1P17405 629 aa21.25■□□□□ 0.99
CLN6-210ENST00000635747 EDNRBP24530 442 aa21.25■□□□□ 0.99
CLN6-210ENST00000635747 MCM5P33992 734 aa21.25■□□□□ 0.99
CLN6-210ENST00000635747 RNF20Q5VTR2 975 aa21.25■□□□□ 0.99
CLN6-210ENST00000635747 ANKRD33Q7Z3H0 272 aa21.25■□□□□ 0.99
CLN6-210ENST00000635747 SAMD3Q8N6K7 520 aa21.25■□□□□ 0.99
CLN6-210ENST00000635747 MTMR8Q96EF0 704 aa21.25■□□□□ 0.99
CLN6-210ENST00000635747 MAP3K14Q99558 947 aa21.25■□□□□ 0.99
CLN6-210ENST00000635747 PDLIM7Q9NR12 457 aa21.25■□□□□ 0.99
CLN6-210ENST00000635747 PDGFCQ9NRA1 345 aa21.25■□□□□ 0.99
CLN6-210ENST00000635747 RBM47A0AV96 593 aaKnown RBP21.24■□□□□ 0.99
CLN6-210ENST00000635747 SLC27A2O14975 620 aa21.24■□□□□ 0.99
CLN6-210ENST00000635747 CLTBP09497 229 aa21.24■□□□□ 0.99
CLN6-210ENST00000635747 TROAPQ12815 778 aa21.24■□□□□ 0.99
CLN6-210ENST00000635747 NECTIN1Q15223 517 aa21.24■□□□□ 0.99
CLN6-210ENST00000635747 FSCN1Q16658 493 aaKnown RBP21.24■□□□□ 0.99
CLN6-210ENST00000635747 DUSP28Q4G0W2 176 aa21.24■□□□□ 0.99
CLN6-210ENST00000635747 CHST3Q7LGC8 479 aa21.24■□□□□ 0.99
CLN6-210ENST00000635747 NSUN6Q8TEA1 469 aaKnown RBP21.24■□□□□ 0.99
CLN6-210ENST00000635747 TMEM87BQ96K49 555 aa21.24■□□□□ 0.99
CLN6-210ENST00000635747 SEZ6LQ9BYH1 1024 aa21.24■□□□□ 0.99
CLN6-210ENST00000635747 WDR11Q9BZH6 1224 aa21.24■□□□□ 0.99
CLN6-210ENST00000635747 RIOX1Q9H6W3 641 aa21.24■□□□□ 0.99
CLN6-210ENST00000635747 MAP3K20Q9NYL2 800 aaKnown RBP21.24■□□□□ 0.99
CLN6-210ENST00000635747 LAMA3Q16787 3333 aa21.24■□□□□ 0.99
CLN6-210ENST00000635747 A0A0U1RQG5 324 aaPredicted RBP21.23■□□□□ 0.99
CLN6-210ENST00000635747 NKRFO15226 690 aaKnown RBP eCLIP21.23■□□□□ 0.99
CLN6-210ENST00000635747 CTAGE5O15320 804 aa21.23■□□□□ 0.99
CLN6-210ENST00000635747 PQBP1O60828 265 aaKnown RBP21.23■□□□□ 0.99
CLN6-210ENST00000635747 NEFLP07196 543 aa21.23■□□□□ 0.99
CLN6-210ENST00000635747 CENPBP07199 599 aaPredicted RBP21.23■□□□□ 0.99
CLN6-210ENST00000635747 ANTXR2P58335 489 aa21.23■□□□□ 0.99
CLN6-210ENST00000635747 CREB3L3Q68CJ9 461 aa21.23■□□□□ 0.99
CLN6-210ENST00000635747 SCFD2Q8WU76 684 aa21.23■□□□□ 0.99
CLN6-210ENST00000635747 IWS1Q96ST2 819 aa21.23■□□□□ 0.99
CLN6-210ENST00000635747 PCDH10Q9P2E7 1040 aa21.23■□□□□ 0.99
CLN6-210ENST00000635747 DDX49Q9Y6V7 483 aaKnown RBP21.23■□□□□ 0.99
CLN6-210ENST00000635747 PRC1O43663 620 aa21.22■□□□□ 0.99
CLN6-210ENST00000635747 CDC45O75419 566 aa21.22■□□□□ 0.99
CLN6-210ENST00000635747 KIF5BP33176 963 aa21.22■□□□□ 0.99
CLN6-210ENST00000635747 LRIT3Q3SXY7 679 aa21.22■□□□□ 0.99
CLN6-210ENST00000635747 SYTL5Q8TDW5 730 aaPredicted RBP21.22■□□□□ 0.99
CLN6-210ENST00000635747 TMEM39AQ9NV64 488 aa21.22■□□□□ 0.99
CLN6-210ENST00000635747 PCDHA1Q9Y5I3 950 aa21.22■□□□□ 0.99
CLN6-210ENST00000635747 ARVCFO00192 962 aa21.21■□□□□ 0.99
CLN6-210ENST00000635747 KIAA0355O15063 1070 aa21.21■□□□□ 0.99
CLN6-210ENST00000635747 DDAH1O94760 285 aa21.21■□□□□ 0.99
CLN6-210ENST00000635747 CDK7P50613 346 aa21.21■□□□□ 0.99
CLN6-210ENST00000635747 IRX5P78411 483 aaPredicted RBP21.21■□□□□ 0.99
CLN6-210ENST00000635747 BEX3Q00994 111 aa21.21■□□□□ 0.99
CLN6-210ENST00000635747 BRDTQ58F21 947 aaPredicted RBP21.21■□□□□ 0.99
CLN6-210ENST00000635747 CTCFLQ8NI51 663 aaPredicted RBP21.21■□□□□ 0.99
CLN6-210ENST00000635747 RMDN3Q96TC7 470 aa21.21■□□□□ 0.99
CLN6-210ENST00000635747 LY9Q9HBG7 655 aa21.21■□□□□ 0.99
CLN6-210ENST00000635747 SENP2Q9HC62 589 aa21.21■□□□□ 0.99
CLN6-210ENST00000635747 PNMA6FA0A0J9YX94 578 aa21.2■□□□□ 0.98
CLN6-210ENST00000635747 TRIM43BA6NCK2 446 aa21.2■□□□□ 0.98
CLN6-210ENST00000635747 CFBP00751 764 aa21.2■□□□□ 0.98
CLN6-210ENST00000635747 LIFRP42702 1097 aa21.2■□□□□ 0.98
CLN6-210ENST00000635747 GNAQP50148 359 aa21.2■□□□□ 0.98
CLN6-210ENST00000635747 CPT1AP50416 773 aa21.2■□□□□ 0.98
CLN6-210ENST00000635747 GHRHRQ02643 423 aa21.2■□□□□ 0.98
CLN6-210ENST00000635747 FAAP100Q0VG06 881 aa21.2■□□□□ 0.98
CLN6-210ENST00000635747 PPP2R5BQ15173 497 aa21.2■□□□□ 0.98
CLN6-210ENST00000635747 NFXL1Q6ZNB6 911 aa21.2■□□□□ 0.98
CLN6-210ENST00000635747 SH3RF1Q7Z6J0 888 aa21.2■□□□□ 0.98
CLN6-210ENST00000635747 SKAP1Q86WV1 359 aa21.2■□□□□ 0.98
CLN6-210ENST00000635747 ZNF654Q8IZM8 581 aa21.2■□□□□ 0.98
CLN6-210ENST00000635747 TBC1D5Q92609 795 aa21.2■□□□□ 0.98
CLN6-210ENST00000635747 TRIM43Q96BQ3 446 aaPredicted RBP21.2■□□□□ 0.98
CLN6-210ENST00000635747 TAAR1Q96RJ0 339 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms