RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 TNFAIP2Q03169 654 aa18.2■□□□□ 0.5
LINC00339-207ENST00000634712 PDE4DQ08499 809 aa18.2■□□□□ 0.5
LINC00339-207ENST00000634712 ADCK5Q3MIX3 580 aa18.2■□□□□ 0.5
LINC00339-207ENST00000634712 PIBF1Q8WXW3 757 aa18.2■□□□□ 0.5
LINC00339-207ENST00000634712 LENG1Q96BZ8 264 aaPredicted RBP18.2■□□□□ 0.5
LINC00339-207ENST00000634712 VTA1Q9NP79 307 aa18.2■□□□□ 0.5
LINC00339-207ENST00000634712 ASTN1O14525 1302 aa18.19■□□□□ 0.5
LINC00339-207ENST00000634712 CFBP00751 764 aa18.19■□□□□ 0.5
LINC00339-207ENST00000634712 HSPA4P34932 840 aa18.19■□□□□ 0.5
LINC00339-207ENST00000634712 ADCYAP1R1P41586 468 aa18.19■□□□□ 0.5
LINC00339-207ENST00000634712 ATN1P54259 1190 aaPredicted RBP18.19■□□□□ 0.5
LINC00339-207ENST00000634712 EXOSC10Q01780 885 aaKnown RBP18.19■□□□□ 0.5
LINC00339-207ENST00000634712 IQSEC1Q6DN90 963 aa18.19■□□□□ 0.5
LINC00339-207ENST00000634712 TBC1D5Q92609 795 aa18.19■□□□□ 0.5
LINC00339-207ENST00000634712 FERMT2Q96AC1 680 aa18.19■□□□□ 0.5
LINC00339-207ENST00000634712 RRP36Q96EU6 259 aaKnown RBP18.19■□□□□ 0.5
LINC00339-207ENST00000634712 KATNBL1Q9H079 304 aa18.19■□□□□ 0.5
LINC00339-207ENST00000634712 SEC63Q9UGP8 760 aaKnown RBP18.19■□□□□ 0.5
LINC00339-207ENST00000634712 CYTH3O43739 400 aa18.18■□□□□ 0.5
LINC00339-207ENST00000634712 C6orf222P0C671 652 aaPredicted RBP18.18■□□□□ 0.5
LINC00339-207ENST00000634712 RXRAP19793 462 aa18.18■□□□□ 0.5
LINC00339-207ENST00000634712 SMARCA1P28370 1054 aa18.18■□□□□ 0.5
LINC00339-207ENST00000634712 COL9A3Q14050 684 aaPredicted RBP18.18■□□□□ 0.5
LINC00339-207ENST00000634712 LRRC26Q2I0M4 334 aa18.18■□□□□ 0.5
LINC00339-207ENST00000634712 SGMS1Q86VZ5 419 aa18.18■□□□□ 0.5
LINC00339-207ENST00000634712 FBXO16Q8IX29 292 aaPredicted RBP18.18■□□□□ 0.5
LINC00339-207ENST00000634712 MORC4Q8TE76 937 aa18.18■□□□□ 0.5
LINC00339-207ENST00000634712 TCEANC2Q96MN5 208 aa18.18■□□□□ 0.5
LINC00339-207ENST00000634712 JAKMIP1Q96N16 626 aaKnown RBP18.18■□□□□ 0.5
LINC00339-207ENST00000634712 DDX49Q9Y6V7 483 aaKnown RBP18.18■□□□□ 0.5
LINC00339-207ENST00000634712 BAZ2BQ9UIF8 2168 aaKnown RBP18.18■□□□□ 0.5
LINC00339-207ENST00000634712 SYNRGQ9UMZ2 1314 aa18.18■□□□□ 0.5
LINC00339-207ENST00000634712 EPB41L2O43491 1005 aaKnown RBP18.17■□□□□ 0.5
LINC00339-207ENST00000634712 PSMA5P28066 241 aa18.17■□□□□ 0.5
LINC00339-207ENST00000634712 BLOC1S2Q6QNY1 142 aa18.17■□□□□ 0.5
LINC00339-207ENST00000634712 MICU3Q86XE3 530 aa18.17■□□□□ 0.5
LINC00339-207ENST00000634712 RAB11FIP4Q86YS3 637 aa18.17■□□□□ 0.5
LINC00339-207ENST00000634712 FANCBQ8NB91 859 aa18.17■□□□□ 0.5
LINC00339-207ENST00000634712 PCSK9Q8NBP7 692 aaKnown RBP18.17■□□□□ 0.5
LINC00339-207ENST00000634712 SYTL5Q8TDW5 730 aaPredicted RBP18.17■□□□□ 0.5
LINC00339-207ENST00000634712 NSUN6Q8TEA1 469 aaKnown RBP18.17■□□□□ 0.5
LINC00339-207ENST00000634712 KCNB2Q92953 911 aa18.17■□□□□ 0.5
LINC00339-207ENST00000634712 TSEN34Q9BSV6 310 aaKnown RBP18.17■□□□□ 0.5
LINC00339-207ENST00000634712 SPZ1Q9BXG8 430 aa18.17■□□□□ 0.5
LINC00339-207ENST00000634712 AP5M1Q9H0R1 490 aa18.17■□□□□ 0.5
LINC00339-207ENST00000634712 PDGFCQ9NRA1 345 aa18.17■□□□□ 0.5
LINC00339-207ENST00000634712 NAP1L2Q9ULW6 460 aaPredicted RBP18.17■□□□□ 0.5
LINC00339-207ENST00000634712 SNX14Q9Y5W7 946 aa18.17■□□□□ 0.5
LINC00339-207ENST00000634712 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.17■□□□□ 0.5
LINC00339-207ENST00000634712 PPP1R11O60927 126 aaPredicted RBP18.17■□□□□ 0.5
LINC00339-207ENST00000634712 ADAMTS4O75173 837 aa18.17■□□□□ 0.5
LINC00339-207ENST00000634712 GJA9P57773 515 aa18.17■□□□□ 0.5
LINC00339-207ENST00000634712 SLC35G1Q2M3R5 365 aa18.17■□□□□ 0.5
LINC00339-207ENST00000634712 ARHGEF16Q5VV41 709 aa18.17■□□□□ 0.5
LINC00339-207ENST00000634712 TAPT1Q6NXT6 567 aa18.17■□□□□ 0.5
LINC00339-207ENST00000634712 SLC39A5Q6ZMH5 540 aa18.17■□□□□ 0.5
LINC00339-207ENST00000634712 SAMD3Q8N6K7 520 aa18.17■□□□□ 0.5
LINC00339-207ENST00000634712 TAAR1Q96RJ0 339 aa18.17■□□□□ 0.5
LINC00339-207ENST00000634712 RMDN3Q96TC7 470 aa18.17■□□□□ 0.5
LINC00339-207ENST00000634712 MAP3K20Q9NYL2 800 aaKnown RBP18.17■□□□□ 0.5
LINC00339-207ENST00000634712 PHF24Q9UPV7 400 aa18.17■□□□□ 0.5
LINC00339-207ENST00000634712 CEP290O15078 2479 aa18.16■□□□□ 0.5
LINC00339-207ENST00000634712 MOXD2PA6NHM9 499 aa18.16■□□□□ 0.5
LINC00339-207ENST00000634712 DYNC1LI2O43237 492 aaPredicted RBP18.16■□□□□ 0.5
LINC00339-207ENST00000634712 ZBTB43O43298 467 aa18.16■□□□□ 0.5
LINC00339-207ENST00000634712 KCNA10Q16322 511 aa18.16■□□□□ 0.5
LINC00339-207ENST00000634712 GNASQ5JWF2 1037 aa18.16■□□□□ 0.5
LINC00339-207ENST00000634712 CCDC82Q8N4S0 544 aa18.16■□□□□ 0.5
LINC00339-207ENST00000634712 SRBD1Q8N5C6 995 aaKnown RBP18.16■□□□□ 0.5
LINC00339-207ENST00000634712 KLHDC9Q8NEP7 349 aa18.16■□□□□ 0.5
LINC00339-207ENST00000634712 VTI1AQ96AJ9 217 aa18.16■□□□□ 0.5
LINC00339-207ENST00000634712 IWS1Q96ST2 819 aa18.16■□□□□ 0.5
LINC00339-207ENST00000634712 WDR11Q9BZH6 1224 aa18.16■□□□□ 0.5
LINC00339-207ENST00000634712 RBM28Q9NW13 759 aaKnown RBP18.16■□□□□ 0.5
LINC00339-207ENST00000634712 ZMYND8Q9ULU4 1186 aaPredicted RBP18.16■□□□□ 0.5
LINC00339-207ENST00000634712 ATP11BQ9Y2G3 1177 aa18.16■□□□□ 0.5
LINC00339-207ENST00000634712 GCOM1H8Y6P7 765 aaPredicted RBP18.15■□□□□ 0.5
LINC00339-207ENST00000634712 ADCY6O43306 1168 aa18.15■□□□□ 0.5
LINC00339-207ENST00000634712 ZEB2O60315 1214 aa18.15■□□□□ 0.5
LINC00339-207ENST00000634712 PLEKHA8P1O95397 391 aa18.15■□□□□ 0.5
LINC00339-207ENST00000634712 POLR2MP0CAP2 368 aa18.15■□□□□ 0.5
LINC00339-207ENST00000634712 SMPD1P17405 629 aa18.15■□□□□ 0.5
LINC00339-207ENST00000634712 ACLYP53396 1101 aa18.15■□□□□ 0.5
LINC00339-207ENST00000634712 RTP1P59025 263 aa18.15■□□□□ 0.5
LINC00339-207ENST00000634712 APOA5Q6Q788 366 aa18.15■□□□□ 0.5
LINC00339-207ENST00000634712 TLK2Q86UE8 772 aa18.15■□□□□ 0.5
LINC00339-207ENST00000634712 CMTR1Q8N1G2 835 aaKnown RBP18.15■□□□□ 0.5
LINC00339-207ENST00000634712 USP26Q9BXU7 913 aa18.15■□□□□ 0.5
LINC00339-207ENST00000634712 UPF3AQ9H1J1 476 aaKnown RBP18.15■□□□□ 0.5
LINC00339-207ENST00000634712 PRKAG2Q9UGJ0 569 aa18.15■□□□□ 0.5
LINC00339-207ENST00000634712 Q9Y3F1 56 aa18.15■□□□□ 0.5
LINC00339-207ENST00000634712 KLF18A0A0U1RQI7 1052 aa18.14■□□□□ 0.49
LINC00339-207ENST00000634712 A0A1W2PQ45 241 aaPredicted RBP18.14■□□□□ 0.49
LINC00339-207ENST00000634712 A0A1W2PQY0 241 aa18.14■□□□□ 0.49
LINC00339-207ENST00000634712 CPA1P15085 419 aa18.14■□□□□ 0.49
LINC00339-207ENST00000634712 CASTP20810 708 aaKnown RBP18.14■□□□□ 0.49
LINC00339-207ENST00000634712 EDNRBP24530 442 aa18.14■□□□□ 0.49
LINC00339-207ENST00000634712 CST5P28325 142 aaPredicted RBP18.14■□□□□ 0.49
LINC00339-207ENST00000634712 HSD17B4P51659 736 aa18.14■□□□□ 0.49
LINC00339-207ENST00000634712 STXBP2Q15833 593 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms