RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 CAPN12Q6ZSI9 719 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 ARHGEF1Q92888 912 aaKnown RBP7□□□□□ -1.29
SRGAP1-207ENST00000631006 DBNDD2Q9BQY9 259 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 YIPF2Q9BWQ6 316 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 ERVV-2B6SEH9 535 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 RAD17O75943 681 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 IFNA8P32881 189 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 GTF2A1P52655 376 aaPredicted RBP7□□□□□ -1.29
SRGAP1-207ENST00000631006 POSTNQ15063 836 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 TAF11Q15544 211 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 LONRF3Q496Y0 759 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 USPL1Q5W0Q7 1092 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 CIAPIN1Q6FI81 312 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 CEP85Q6P2H3 762 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 ARMCX2Q7L311 632 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 PGBD3Q8N328 593 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 GADD45GIP1Q8TAE8 222 aaPredicted RBP7□□□□□ -1.29
SRGAP1-207ENST00000631006 RAET1EQ8TD07 263 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 AFAP1L1Q8TED9 768 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 DYRK4Q9NR20 520 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 KCNJ14Q9UNX9 436 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 XDHP47989 1333 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 ZMYM3Q14202 1370 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 ARHGAP6O43182 974 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 PMLP29590 882 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 ARL4AP40617 200 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 B4GALNT4Q76KP1 1039 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 PDCD7Q8N8D1 485 aaKnown RBP7□□□□□ -1.29
SRGAP1-207ENST00000631006 LZICQ8WZA0 190 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 KMT5AQ9NQR1 393 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 INPP5FQ9Y2H2 1132 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 EIF3CLB5ME19 914 aaKnown RBP7□□□□□ -1.29
SRGAP1-207ENST00000631006 EVI5O60447 810 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 BUB1BO60566 1050 aaPredicted RBP7□□□□□ -1.29
SRGAP1-207ENST00000631006 UBXN2AP68543 259 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 MYL7Q01449 175 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 ASPHQ12797 758 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 LRCH2Q5VUJ6 765 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 SEPT8Q92599 483 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 EIF3CQ99613 913 aaKnown RBP7□□□□□ -1.29
SRGAP1-207ENST00000631006 DBNDD1Q9H9R9 158 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 COL4A3BPQ9Y5P4 624 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 STX2P32856 288 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 KCNJ6P48051 423 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 MFAP3P55082 362 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 ARL13BQ3SXY8 428 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 RTKN2Q8IZC4 609 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 CDHR1Q96JP9 859 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 ORAI2Q96SN7 254 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 HPCAL4Q9UM19 191 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 ZFYVE9O95405 1425 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 GYG1P46976 350 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 CC2D1AQ6P1N0 951 aaPredicted RBP7□□□□□ -1.29
SRGAP1-207ENST00000631006 DNAAF3Q8N9W5 541 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 SNX19Q92543 992 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 ZNF653Q96CK0 615 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 LLPHQ9BRT6 129 aaKnown RBP7□□□□□ -1.29
SRGAP1-207ENST00000631006 RABEP2Q9H5N1 569 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 DOLKQ9UPQ8 538 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 ASXL1Q8IXJ9 1541 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 DISP3Q9P2K9 1392 aa7□□□□□ -1.29
SRGAP1-207ENST00000631006 HSPA8P11142 646 aaKnown RBP6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 ATF2P15336 505 aa6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 ABCD1P33897 745 aa6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 PTK2Q05397 1052 aa6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 PAK2Q13177 524 aa6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 CCDC124Q96CT7 223 aaKnown RBP6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 MRPL46Q9H2W6 279 aaKnown RBP6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 NLRC4Q9NPP4 1024 aa6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 FAM207AQ9NSI2 230 aaPredicted RBP6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 LARSQ9P2J5 1176 aaKnown RBP6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 YEATS2Q9ULM3 1422 aa6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 SGK1O00141 431 aa6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 YWHAGP61981 247 aaKnown RBP eCLIP6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 TUBB2AQ13885 445 aa6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 NOLC1Q14978 699 aaKnown RBP eCLIP6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 FRA10AC1Q70Z53 315 aa6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 TEKT4Q8WW24 435 aa6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 IQCDQ96DY2 449 aa6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 PSMB7Q99436 277 aa6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 TUBB2BQ9BVA1 445 aa6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 TYW1Q9NV66 732 aaKnown RBP6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 ZNF212Q9UDV6 495 aa6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 MARK3P27448 753 aa6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 PDE1BQ01064 536 aa6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 FOXD4Q12950 439 aaPredicted RBP6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 TMC4Q7Z404 712 aa6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 CCDC84Q86UT8 332 aaPredicted RBP6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 BLIDQ8IZY5 108 aa6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 TRIM45Q9H8W5 580 aaPredicted RBP6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 UBN2Q6ZU65 1347 aa6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 NPR1P16066 1061 aa6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 ATICP31939 592 aa6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 KPNA2P52292 529 aaKnown RBP6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 BPIFB4P59827 614 aa6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 TFAMQ00059 246 aaKnown RBP6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 FAM49AQ9H0Q0 323 aaPredicted RBP6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 NCOA5Q9HCD5 579 aaKnown RBP6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.99□□□□□ -1.29
SRGAP1-207ENST00000631006 PCF11O94913 1555 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms