RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 RGL1Q9NZL6 768 aa8.39□□□□□ -1.07
PKP4-217ENST00000628904 PI4KBQ9UBF8 816 aa8.39□□□□□ -1.07
PKP4-217ENST00000628904 SPATA31A6Q5VVP1 1343 aa8.39□□□□□ -1.07
PKP4-217ENST00000628904 DISP2A7MBM2 1401 aa8.39□□□□□ -1.07
PKP4-217ENST00000628904 CCDC175P0C221 793 aa8.39□□□□□ -1.07
PKP4-217ENST00000628904 ATP2C1P98194 919 aaPredicted RBP8.39□□□□□ -1.07
PKP4-217ENST00000628904 MKRN3Q13064 507 aaKnown RBP8.39□□□□□ -1.07
PKP4-217ENST00000628904 SPATA1Q5VX52 437 aa8.39□□□□□ -1.07
PKP4-217ENST00000628904 PHRF1Q9P1Y6 1649 aaKnown RBP8.39□□□□□ -1.07
PKP4-217ENST00000628904 STK36Q9NRP7 1315 aa8.39□□□□□ -1.07
PKP4-217ENST00000628904 MYCNP04198 464 aaPredicted RBP8.39□□□□□ -1.07
PKP4-217ENST00000628904 DPEP1P16444 411 aa8.39□□□□□ -1.07
PKP4-217ENST00000628904 CXCR5P32302 372 aa8.39□□□□□ -1.07
PKP4-217ENST00000628904 APBA1Q02410 837 aa8.39□□□□□ -1.07
PKP4-217ENST00000628904 R3HDM1Q15032 1099 aaKnown RBP8.39□□□□□ -1.07
PKP4-217ENST00000628904 NBPF9Q3BBW0 867 aa8.39□□□□□ -1.07
PKP4-217ENST00000628904 FBXO11Q86XK2 927 aa8.39□□□□□ -1.07
PKP4-217ENST00000628904 CHP1Q99653 195 aa8.39□□□□□ -1.07
PKP4-217ENST00000628904 RMND1Q9NWS8 449 aa8.39□□□□□ -1.07
PKP4-217ENST00000628904 WDR19Q8NEZ3 1342 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 TESPA1A2RU30 521 aaPredicted RBP8.38□□□□□ -1.07
PKP4-217ENST00000628904 PSMD14O00487 310 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 RRP9O43818 475 aaKnown RBP8.38□□□□□ -1.07
PKP4-217ENST00000628904 SEC31AO94979 1220 aaKnown RBP8.38□□□□□ -1.07
PKP4-217ENST00000628904 SLU7O95391 586 aaKnown RBP8.38□□□□□ -1.07
PKP4-217ENST00000628904 HARSP12081 509 aaKnown RBP8.38□□□□□ -1.07
PKP4-217ENST00000628904 NOP2P46087 812 aaKnown RBP8.38□□□□□ -1.07
PKP4-217ENST00000628904 FXR1P51114 621 aaKnown RBP eCLIP8.38□□□□□ -1.07
PKP4-217ENST00000628904 CDR1P51861 262 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 CCDC122Q5T0U0 273 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 RRAGAQ7L523 313 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 TTLL6Q8N841 843 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 AKT1S1Q96B36 256 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 JMJD4Q9H9V9 463 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 HPSEQ9Y251 543 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 GTPBP6O43824 516 aaPredicted RBP8.38□□□□□ -1.07
PKP4-217ENST00000628904 GCNT3O95395 438 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 COPB1P53618 953 aaKnown RBP8.38□□□□□ -1.07
PKP4-217ENST00000628904 SLC35G1Q2M3R5 365 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 SLC27A3Q5K4L6 730 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 ZFYVE27Q5T4F4 411 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 C16orf86Q6ZW13 317 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 VSTM4Q8IW00 320 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 CNKSR1Q969H4 720 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 ZNF668Q96K58 619 aaPredicted RBP8.38□□□□□ -1.07
PKP4-217ENST00000628904 WDR24Q96S15 920 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 GLIS2Q9BZE0 524 aaPredicted RBP8.38□□□□□ -1.07
PKP4-217ENST00000628904 ANAPC4Q9UJX5 808 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 ARFGEF2Q9Y6D5 1785 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 ZBTB39O15060 712 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 BUB1O43683 1085 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 TBCAO75347 108 aaKnown RBP8.38□□□□□ -1.07
PKP4-217ENST00000628904 FLOT1O75955 427 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 FUT2Q10981 343 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 SPA17Q15506 151 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 TMEM132AQ24JP5 1023 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 APOBEC3HQ6NTF7 200 aaKnown RBP8.38□□□□□ -1.07
PKP4-217ENST00000628904 KRT26Q7Z3Y9 468 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 LARP4BQ92615 738 aaKnown RBP8.38□□□□□ -1.07
PKP4-217ENST00000628904 DDX12PQ92771 950 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 ELMO3Q96BJ8 720 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 CNOT6LQ96LI5 555 aaKnown RBP8.38□□□□□ -1.07
PKP4-217ENST00000628904 CCDC42Q96M95 316 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 TUBGCP2Q9BSJ2 902 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 ZNF341Q9BYN7 854 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 CENPHQ9H3R5 247 aa8.38□□□□□ -1.07
PKP4-217ENST00000628904 SRGAP2O75044 1071 aa8.37□□□□□ -1.07
PKP4-217ENST00000628904 ZNF772Q68DY9 489 aaPredicted RBP8.37□□□□□ -1.07
PKP4-217ENST00000628904 TIGD1Q96MW7 591 aa8.37□□□□□ -1.07
PKP4-217ENST00000628904 BHMT2Q9H2M3 363 aa8.37□□□□□ -1.07
PKP4-217ENST00000628904 RABEP2Q9H5N1 569 aa8.37□□□□□ -1.07
PKP4-217ENST00000628904 PEX10O60683 326 aa8.37□□□□□ -1.07
PKP4-217ENST00000628904 PRPF6O94906 941 aaKnown RBP8.37□□□□□ -1.07
PKP4-217ENST00000628904 NDUFB10O96000 172 aa8.37□□□□□ -1.07
PKP4-217ENST00000628904 BMP3P12645 472 aa8.37□□□□□ -1.07
PKP4-217ENST00000628904 EIF2AK2P19525 551 aaKnown RBP8.37□□□□□ -1.07
PKP4-217ENST00000628904 CYP2J2P51589 502 aa8.37□□□□□ -1.07
PKP4-217ENST00000628904 SBK1Q52WX2 424 aa8.37□□□□□ -1.07
PKP4-217ENST00000628904 TAF3Q5VWG9 929 aa8.37□□□□□ -1.07
PKP4-217ENST00000628904 CC2D2BQ6DHV5 1058 aa8.37□□□□□ -1.07
PKP4-217ENST00000628904 RBM43Q6ZSC3 357 aaKnown RBP8.37□□□□□ -1.07
PKP4-217ENST00000628904 ARHGAP27Q6ZUM4 889 aa8.37□□□□□ -1.07
PKP4-217ENST00000628904 PODNQ7Z5L7 613 aa8.37□□□□□ -1.07
PKP4-217ENST00000628904 GSDMAQ96QA5 445 aa8.37□□□□□ -1.07
PKP4-217ENST00000628904 SPAG5Q96R06 1193 aa8.37□□□□□ -1.07
PKP4-217ENST00000628904 TSG101Q99816 390 aa8.37□□□□□ -1.07
PKP4-217ENST00000628904 ZNF142P52746 1687 aaPredicted RBP8.37□□□□□ -1.07
PKP4-217ENST00000628904 LONP1P36776 959 aaKnown RBP8.37□□□□□ -1.07
PKP4-217ENST00000628904 BAG6P46379 1132 aa8.37□□□□□ -1.07
PKP4-217ENST00000628904 PRPF4BQ13523 1007 aaKnown RBP8.37□□□□□ -1.07
PKP4-217ENST00000628904 UTP14CQ5TAP6 766 aaKnown RBP8.37□□□□□ -1.07
PKP4-217ENST00000628904 MYCT1Q8N699 235 aa8.37□□□□□ -1.07
PKP4-217ENST00000628904 PURBQ96QR8 312 aaKnown RBP8.37□□□□□ -1.07
PKP4-217ENST00000628904 PDCL3Q9H2J4 239 aa8.37□□□□□ -1.07
PKP4-217ENST00000628904 IKZF4Q9H2S9 585 aa8.37□□□□□ -1.07
PKP4-217ENST00000628904 MRPL44Q9H9J2 332 aaKnown RBP8.37□□□□□ -1.07
PKP4-217ENST00000628904 AGPAT5Q9NUQ2 364 aa8.37□□□□□ -1.07
PKP4-217ENST00000628904 TUBE1Q9UJT0 475 aa8.37□□□□□ -1.07
PKP4-217ENST00000628904 ABL1P00519 1130 aa8.36□□□□□ -1.07
PKP4-217ENST00000628904 ENOX1Q8TC92 643 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms