RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 CCDC24Q8N4L8 307 aa21.43■■□□□ 1.02
PTBP1-220ENST00000627714 JAKMIP2Q96AA8 810 aa21.43■■□□□ 1.02
PTBP1-220ENST00000627714 CDK5RAP2Q96SN8 1893 aa21.43■■□□□ 1.02
PTBP1-220ENST00000627714 ZCCHC17Q9NP64 241 aaKnown RBP21.43■■□□□ 1.02
PTBP1-220ENST00000627714 STK17AQ9UEE5 414 aa21.43■■□□□ 1.02
PTBP1-220ENST00000627714 GPR75-ASB3A0A0A6YYF3 556 aa21.43■■□□□ 1.02
PTBP1-220ENST00000627714 TSGA10Q9BZW7 698 aa21.43■■□□□ 1.02
PTBP1-220ENST00000627714 MTMR7Q9Y216 660 aa21.43■■□□□ 1.02
PTBP1-220ENST00000627714 BTDP43251 543 aa21.42■■□□□ 1.02
PTBP1-220ENST00000627714 NOVP48745 357 aa21.42■■□□□ 1.02
PTBP1-220ENST00000627714 STK4Q13043 487 aa21.42■■□□□ 1.02
PTBP1-220ENST00000627714 MCM6Q14566 821 aa21.42■■□□□ 1.02
PTBP1-220ENST00000627714 SLF2Q8IX21 1173 aa21.42■■□□□ 1.02
PTBP1-220ENST00000627714 REXO1Q8N1G1 1221 aaKnown RBP21.42■■□□□ 1.02
PTBP1-220ENST00000627714 ARHGEF1Q92888 912 aaKnown RBP21.42■■□□□ 1.02
PTBP1-220ENST00000627714 NOC4LQ9BVI4 516 aaKnown RBP21.42■■□□□ 1.02
PTBP1-220ENST00000627714 TRIM10Q9UDY6 481 aa21.42■■□□□ 1.02
PTBP1-220ENST00000627714 SAP30BPQ9UHR5 308 aaKnown RBP21.42■■□□□ 1.02
PTBP1-220ENST00000627714 BTAF1O14981 1849 aa21.42■■□□□ 1.02
PTBP1-220ENST00000627714 ABCB11O95342 1321 aa21.42■■□□□ 1.02
PTBP1-220ENST00000627714 H3BQF6 201 aa21.41■■□□□ 1.02
PTBP1-220ENST00000627714 NCAPH2Q6IBW4 605 aa21.41■■□□□ 1.02
PTBP1-220ENST00000627714 NHEJ1Q9H9Q4 299 aaPredicted RBP21.41■■□□□ 1.02
PTBP1-220ENST00000627714 PVALEFA0A1B0GWK0 134 aa21.41■■□□□ 1.02
PTBP1-220ENST00000627714 FGFR1OPO95684 399 aaKnown RBP21.41■■□□□ 1.02
PTBP1-220ENST00000627714 TEX11Q8IYF3 940 aa21.41■■□□□ 1.02
PTBP1-220ENST00000627714 NOA1Q8NC60 698 aaKnown RBP21.41■■□□□ 1.02
PTBP1-220ENST00000627714 PDE11AQ9HCR9 933 aa21.41■■□□□ 1.02
PTBP1-220ENST00000627714 ADAM21Q9UKJ8 722 aa21.41■■□□□ 1.02
PTBP1-220ENST00000627714 TECP42680 631 aa21.4■■□□□ 1.02
PTBP1-220ENST00000627714 ST5P78524 1137 aa21.4■■□□□ 1.02
PTBP1-220ENST00000627714 GRIK5Q16478 980 aa21.4■■□□□ 1.02
PTBP1-220ENST00000627714 MAP9Q49MG5 647 aa21.4■■□□□ 1.02
PTBP1-220ENST00000627714 MIIPQ5JXC2 388 aa21.4■■□□□ 1.02
PTBP1-220ENST00000627714 CENPPQ6IPU0 288 aa21.4■■□□□ 1.02
PTBP1-220ENST00000627714 SV2BQ7L1I2 683 aa21.4■■□□□ 1.02
PTBP1-220ENST00000627714 TBCKQ8TEA7 893 aa21.4■■□□□ 1.02
PTBP1-220ENST00000627714 AGPAT5Q9NUQ2 364 aa21.4■■□□□ 1.02
PTBP1-220ENST00000627714 CCNL1Q9UK58 526 aaPredicted RBP21.4■■□□□ 1.02
PTBP1-220ENST00000627714 TARSL2A2RTX5 802 aaKnown RBP21.4■■□□□ 1.02
PTBP1-220ENST00000627714 FXR2P51116 673 aaKnown RBP eCLIP21.4■■□□□ 1.02
PTBP1-220ENST00000627714 USP14P54578 494 aa21.4■■□□□ 1.02
PTBP1-220ENST00000627714 CASP8Q14790 479 aa21.4■■□□□ 1.02
PTBP1-220ENST00000627714 MUM1L1Q5H9M0 696 aa21.4■■□□□ 1.02
PTBP1-220ENST00000627714 FAM163AQ96GL9 167 aaPredicted RBP21.4■■□□□ 1.02
PTBP1-220ENST00000627714 PCMTD1Q96MG8 357 aaPredicted RBP21.4■■□□□ 1.02
PTBP1-220ENST00000627714 PURBQ96QR8 312 aaKnown RBP21.4■■□□□ 1.02
PTBP1-220ENST00000627714 MMTAG2Q9BU76 263 aaKnown RBP21.4■■□□□ 1.02
PTBP1-220ENST00000627714 RAB34Q9BZG1 259 aa21.4■■□□□ 1.02
PTBP1-220ENST00000627714 RASSF10A6NK89 507 aa21.39■■□□□ 1.01
PTBP1-220ENST00000627714 TFRCP02786 760 aaKnown RBP21.39■■□□□ 1.01
PTBP1-220ENST00000627714 HNRNPH3P31942 346 aaKnown RBP21.39■■□□□ 1.01
PTBP1-220ENST00000627714 TMEM266Q2M3C6 531 aa21.39■■□□□ 1.01
PTBP1-220ENST00000627714 IQCEQ6IPM2 695 aa21.39■■□□□ 1.01
PTBP1-220ENST00000627714 LRRC27Q9C0I9 530 aa21.39■■□□□ 1.01
PTBP1-220ENST00000627714 RIOX1Q9H6W3 641 aa21.39■■□□□ 1.01
PTBP1-220ENST00000627714 VIPAS39Q9H9C1 493 aa21.39■■□□□ 1.01
PTBP1-220ENST00000627714 NHSQ6T4R5 1651 aa21.39■■□□□ 1.01
PTBP1-220ENST00000627714 ATP1A1P05023 1023 aaKnown RBP21.39■■□□□ 1.01
PTBP1-220ENST00000627714 NFIXQ14938 502 aa21.39■■□□□ 1.01
PTBP1-220ENST00000627714 VPS72Q15906 364 aa21.39■■□□□ 1.01
PTBP1-220ENST00000627714 FOXR2Q6PJQ5 311 aa21.39■■□□□ 1.01
PTBP1-220ENST00000627714 USP17L2Q6R6M4 530 aa21.39■■□□□ 1.01
PTBP1-220ENST00000627714 UNC13DQ70J99 1090 aa21.39■■□□□ 1.01
PTBP1-220ENST00000627714 MED4Q9NPJ6 270 aa21.39■■□□□ 1.01
PTBP1-220ENST00000627714 PLIN4Q96Q06 1357 aa21.38■■□□□ 1.01
PTBP1-220ENST00000627714 FCER1AP12319 257 aa21.38■■□□□ 1.01
PTBP1-220ENST00000627714 IL1R1P14778 569 aa21.38■■□□□ 1.01
PTBP1-220ENST00000627714 ATP2B4P23634 1241 aa21.38■■□□□ 1.01
PTBP1-220ENST00000627714 VAV2P52735 878 aa21.38■■□□□ 1.01
PTBP1-220ENST00000627714 KIF5AQ12840 1032 aa21.38■■□□□ 1.01
PTBP1-220ENST00000627714 HSP90B2PQ58FF3 399 aa21.38■■□□□ 1.01
PTBP1-220ENST00000627714 CNBD1Q8NA66 436 aa21.38■■□□□ 1.01
PTBP1-220ENST00000627714 KIAA0895Q8NCT3 520 aa21.38■■□□□ 1.01
PTBP1-220ENST00000627714 MTMR9Q96QG7 549 aa21.38■■□□□ 1.01
PTBP1-220ENST00000627714 CD209Q9NNX6 404 aa21.38■■□□□ 1.01
PTBP1-220ENST00000627714 RFC4P35249 363 aa21.37■■□□□ 1.01
PTBP1-220ENST00000627714 SPA17Q15506 151 aa21.37■■□□□ 1.01
PTBP1-220ENST00000627714 CALCRLQ16602 461 aa21.37■■□□□ 1.01
PTBP1-220ENST00000627714 FAM71BQ8TC56 605 aa21.37■■□□□ 1.01
PTBP1-220ENST00000627714 CEP95Q96GE4 821 aa21.37■■□□□ 1.01
PTBP1-220ENST00000627714 PIGSQ96S52 555 aa21.37■■□□□ 1.01
PTBP1-220ENST00000627714 LRWD1Q9UFC0 647 aa21.37■■□□□ 1.01
PTBP1-220ENST00000627714 ENC1O14682 589 aa21.37■■□□□ 1.01
PTBP1-220ENST00000627714 HNRNPH2P55795 449 aaKnown RBP21.37■■□□□ 1.01
PTBP1-220ENST00000627714 PDIA5Q14554 519 aa21.37■■□□□ 1.01
PTBP1-220ENST00000627714 CCDC84Q86UT8 332 aaPredicted RBP21.37■■□□□ 1.01
PTBP1-220ENST00000627714 FNBP4Q8N3X1 1017 aaPredicted RBP21.37■■□□□ 1.01
PTBP1-220ENST00000627714 GUF1Q8N442 669 aaKnown RBP21.37■■□□□ 1.01
PTBP1-220ENST00000627714 NEK11Q8NG66 645 aa21.37■■□□□ 1.01
PTBP1-220ENST00000627714 CCDC42Q96M95 316 aa21.37■■□□□ 1.01
PTBP1-220ENST00000627714 PLAGL2Q9UPG8 496 aa21.37■■□□□ 1.01
PTBP1-220ENST00000627714 USO1O60763 962 aaKnown RBP21.36■■□□□ 1.01
PTBP1-220ENST00000627714 LRRC63Q05C16 580 aa21.36■■□□□ 1.01
PTBP1-220ENST00000627714 VWA3BQ502W6 1294 aa21.36■■□□□ 1.01
PTBP1-220ENST00000627714 ASPRV1Q53RT3 343 aa21.36■■□□□ 1.01
PTBP1-220ENST00000627714 POTEDQ86YR6 584 aa21.36■■□□□ 1.01
PTBP1-220ENST00000627714 TBC1D22AQ8WUA7 517 aa21.36■■□□□ 1.01
PTBP1-220ENST00000627714 CDK5RAP3Q96JB5 506 aa21.36■■□□□ 1.01
PTBP1-220ENST00000627714 CPVLQ9H3G5 476 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms