RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 ARMC5Q96C12 935 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 C12orf42Q96LP6 360 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 SEC62Q99442 399 aaKnown RBP7.61□□□□□ -1.19
TCF4-249ENST00000625716 PAGR1Q9BTK6 254 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 TANGO6Q9C0B7 1094 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 NAPBQ9H115 298 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 RPAP3Q9H6T3 665 aaPredicted RBP7.61□□□□□ -1.19
TCF4-249ENST00000625716 KANSL2Q9H9L4 492 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 HELLSQ9NRZ9 838 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 HOXC10Q9NYD6 342 aa7.61□□□□□ -1.19
TCF4-249ENST00000625716 NAV1Q8NEY1 1877 aa7.6□□□□□ -1.19
TCF4-249ENST00000625716 CDK5RAP2Q96SN8 1893 aa7.6□□□□□ -1.19
TCF4-249ENST00000625716 SALL3Q9BXA9 1300 aa7.6□□□□□ -1.19
TCF4-249ENST00000625716 SIPA1L1O43166 1804 aa7.6□□□□□ -1.19
TCF4-249ENST00000625716 ATAD5Q96QE3 1844 aa7.6□□□□□ -1.19
TCF4-249ENST00000625716 A0A1W2PRU2 124 aa7.6□□□□□ -1.19
TCF4-249ENST00000625716 ADCY3O60266 1144 aa7.6□□□□□ -1.19
TCF4-249ENST00000625716 RHOQP17081 205 aa7.6□□□□□ -1.19
TCF4-249ENST00000625716 VCAM1P19320 739 aa7.6□□□□□ -1.19
TCF4-249ENST00000625716 CTGFP29279 349 aa7.6□□□□□ -1.19
TCF4-249ENST00000625716 MAPK4P31152 587 aa7.6□□□□□ -1.19
TCF4-249ENST00000625716 GUCY1A2P33402 732 aa7.6□□□□□ -1.19
TCF4-249ENST00000625716 FLT3LGP49771 235 aa7.6□□□□□ -1.19
TCF4-249ENST00000625716 MFAP1P55081 439 aaKnown RBP7.6□□□□□ -1.19
TCF4-249ENST00000625716 NR1H3Q13133 447 aa7.6□□□□□ -1.19
TCF4-249ENST00000625716 WDR78Q5VTH9 848 aa7.6□□□□□ -1.19
TCF4-249ENST00000625716 CATSPERGQ6ZRH7 1159 aa7.6□□□□□ -1.19
TCF4-249ENST00000625716 LPAR1Q92633 364 aa7.6□□□□□ -1.19
TCF4-249ENST00000625716 ZNF333Q96JL9 665 aa7.6□□□□□ -1.19
TCF4-249ENST00000625716 MORF4L1Q9UBU8 362 aa7.6□□□□□ -1.19
TCF4-249ENST00000625716 GABRQQ9UN88 632 aa7.6□□□□□ -1.19
TCF4-249ENST00000625716 RABGAP1Q9Y3P9 1069 aa7.6□□□□□ -1.19
TCF4-249ENST00000625716 PHIPQ8WWQ0 1821 aa7.59□□□□□ -1.19
TCF4-249ENST00000625716 HIP1O00291 1037 aa7.59□□□□□ -1.19
TCF4-249ENST00000625716 ARHGEF15O94989 841 aa7.59□□□□□ -1.19
TCF4-249ENST00000625716 TSPY3P0CV98 308 aa7.59□□□□□ -1.19
TCF4-249ENST00000625716 TSPY8P0CW00 308 aa7.59□□□□□ -1.19
TCF4-249ENST00000625716 EEF2P13639 858 aaKnown RBP7.59□□□□□ -1.19
TCF4-249ENST00000625716 ERVK-24P63145 666 aa7.59□□□□□ -1.19
TCF4-249ENST00000625716 PPARAQ07869 468 aa7.59□□□□□ -1.19
TCF4-249ENST00000625716 GAS6Q14393 721 aa7.59□□□□□ -1.19
TCF4-249ENST00000625716 COG2Q14746 738 aa7.59□□□□□ -1.19
TCF4-249ENST00000625716 MCMDC2Q4G0Z9 681 aa7.59□□□□□ -1.19
TCF4-249ENST00000625716 PLEKHM2Q8IWE5 1019 aa7.59□□□□□ -1.19
TCF4-249ENST00000625716 VCPKMTQ9H867 229 aa7.59□□□□□ -1.19
TCF4-249ENST00000625716 EPB41L4AQ9HCS5 686 aaPredicted RBP7.59□□□□□ -1.19
TCF4-249ENST00000625716 RBPJLQ9UBG7 517 aa7.59□□□□□ -1.19
TCF4-249ENST00000625716 TMX2Q9Y320 296 aa7.59□□□□□ -1.19
TCF4-249ENST00000625716 A0A1W2PRG0 241 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 SMIM22K7EJ46 135 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 WDR46O15213 610 aaKnown RBP7.58□□□□□ -1.2
TCF4-249ENST00000625716 PRDM1O75626 825 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 FLOT1O75955 427 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 CCL5P13501 91 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 ELNP15502 786 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 RASA1P20936 1047 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 NMIQ13287 307 aaPredicted RBP7.58□□□□□ -1.2
TCF4-249ENST00000625716 IRF5Q13568 498 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 CCDC129Q6ZRS4 1044 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 PLEKHH3Q7Z736 793 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 CLEC10AQ8IUN9 316 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 SPICE1Q8N0Z3 855 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 MB21D1Q8N884 522 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 SOCS4Q8WXH5 440 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 RNF208Q9H0X6 261 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 OSBPL3Q9H4L5 887 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 TXNRD2Q9NNW7 524 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 TOMM22Q9NS69 142 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 DIAPH3Q9NSV4 1193 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 NYAP2Q9P242 653 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 CLIP2Q9UDT6 1046 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 CTDP1Q9Y5B0 961 aaPredicted RBP7.58□□□□□ -1.2
TCF4-249ENST00000625716 IVNS1ABPQ9Y6Y0 642 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 LOC285556D6RIA3 1793 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 DDX60LQ5H9U9 1706 aaKnown RBP7.58□□□□□ -1.2
TCF4-249ENST00000625716 ROBO3Q96MS0 1386 aa7.58□□□□□ -1.2
TCF4-249ENST00000625716 MYH7P12883 1935 aa7.57□□□□□ -1.2
TCF4-249ENST00000625716 TSPY2A6NKD2 308 aa7.57□□□□□ -1.2
TCF4-249ENST00000625716 TRAK2O60296 914 aa7.57□□□□□ -1.2
TCF4-249ENST00000625716 INHAP05111 366 aa7.57□□□□□ -1.2
TCF4-249ENST00000625716 EN2P19622 333 aaPredicted RBP7.57□□□□□ -1.2
TCF4-249ENST00000625716 SDSP20132 328 aa7.57□□□□□ -1.2
TCF4-249ENST00000625716 CYP2B6P20813 491 aa7.57□□□□□ -1.2
TCF4-249ENST00000625716 RGS2P41220 211 aa7.57□□□□□ -1.2
TCF4-249ENST00000625716 TFAP4Q01664 338 aa7.57□□□□□ -1.2
TCF4-249ENST00000625716 PLS1Q14651 629 aa7.57□□□□□ -1.2
TCF4-249ENST00000625716 MTFR1Q15390 333 aa7.57□□□□□ -1.2
TCF4-249ENST00000625716 LBX2Q6XYB7 198 aa7.57□□□□□ -1.2
TCF4-249ENST00000625716 GPR142Q7Z601 462 aa7.57□□□□□ -1.2
TCF4-249ENST00000625716 SIAH1Q8IUQ4 282 aa7.57□□□□□ -1.2
TCF4-249ENST00000625716 FAM227BQ96M60 508 aa7.57□□□□□ -1.2
TCF4-249ENST00000625716 GRIP2Q9C0E4 1043 aa7.57□□□□□ -1.2
TCF4-249ENST00000625716 ISY1Q9ULR0 285 aaKnown RBP7.57□□□□□ -1.2
TCF4-249ENST00000625716 PTPRFP10586 1907 aa7.56□□□□□ -1.2
TCF4-249ENST00000625716 CCDC171Q6TFL3 1326 aa7.56□□□□□ -1.2
TCF4-249ENST00000625716 A0A0D9SFI3 127 aa7.56□□□□□ -1.2
TCF4-249ENST00000625716 SLC15A5A6NIM6 579 aa7.56□□□□□ -1.2
TCF4-249ENST00000625716 MEN1O00255 615 aa7.56□□□□□ -1.2
TCF4-249ENST00000625716 RANBP6O60518 1105 aaKnown RBP7.56□□□□□ -1.2
TCF4-249ENST00000625716 PEX10O60683 326 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms