RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 ALDH5A1P51649 535 aaPredicted RBP22.34■■□□□ 1.17
SMN1-211ENST00000625245 OTOP2Q7RTS6 562 aa22.34■■□□□ 1.17
SMN1-211ENST00000625245 MORC4Q8TE76 937 aa22.34■■□□□ 1.17
SMN1-211ENST00000625245 SEZ6LQ9BYH1 1024 aa22.34■■□□□ 1.17
SMN1-211ENST00000625245 WDR11Q9BZH6 1224 aa22.34■■□□□ 1.17
SMN1-211ENST00000625245 PRDM12Q9H4Q4 367 aa22.34■■□□□ 1.17
SMN1-211ENST00000625245 CXXC1Q9P0U4 656 aaPredicted RBP22.34■■□□□ 1.17
SMN1-211ENST00000625245 GBF1Q92538 1859 aa22.33■■□□□ 1.17
SMN1-211ENST00000625245 TRIM6-TRIM34B2RNG4 842 aa22.33■■□□□ 1.17
SMN1-211ENST00000625245 HSPD1P10809 573 aaKnown RBP22.33■■□□□ 1.17
SMN1-211ENST00000625245 NMIQ13287 307 aaPredicted RBP22.33■■□□□ 1.17
SMN1-211ENST00000625245 DUSP28Q4G0W2 176 aa22.33■■□□□ 1.17
SMN1-211ENST00000625245 NOC4LQ9BVI4 516 aaKnown RBP22.33■■□□□ 1.17
SMN1-211ENST00000625245 TCP11L1Q9NUJ3 509 aa22.33■■□□□ 1.17
SMN1-211ENST00000625245 MYL3P08590 195 aa22.32■■□□□ 1.16
SMN1-211ENST00000625245 RAB30Q15771 203 aa22.32■■□□□ 1.16
SMN1-211ENST00000625245 SYMPKQ92797 1274 aaKnown RBP22.32■■□□□ 1.16
SMN1-211ENST00000625245 PDHBP11177 359 aa22.31■■□□□ 1.16
SMN1-211ENST00000625245 SLC30A10Q6XR72 485 aa22.31■■□□□ 1.16
SMN1-211ENST00000625245 RNF207Q6ZRF8 634 aa22.31■■□□□ 1.16
SMN1-211ENST00000625245 MFSD6Q6ZSS7 791 aa22.31■■□□□ 1.16
SMN1-211ENST00000625245 ZNF589Q86UQ0 364 aaPredicted RBP22.31■■□□□ 1.16
SMN1-211ENST00000625245 RPUSD2Q8IZ73 545 aaKnown RBP22.31■■□□□ 1.16
SMN1-211ENST00000625245 RILPL2Q969X0 211 aa22.31■■□□□ 1.16
SMN1-211ENST00000625245 ALDH8A1Q9H2A2 487 aaPredicted RBP22.31■■□□□ 1.16
SMN1-211ENST00000625245 NKX2-4Q9H2Z4 354 aa22.31■■□□□ 1.16
SMN1-211ENST00000625245 POLR3EQ9NVU0 708 aa22.31■■□□□ 1.16
SMN1-211ENST00000625245 VCANP13611 3396 aa22.3■■□□□ 1.16
SMN1-211ENST00000625245 PDE4DQ08499 809 aa22.3■■□□□ 1.16
SMN1-211ENST00000625245 OR6J1Q8NGC5 347 aa22.3■■□□□ 1.16
SMN1-211ENST00000625245 CLEC4DQ8WXI8 215 aa22.3■■□□□ 1.16
SMN1-211ENST00000625245 SCLYQ96I15 445 aa22.3■■□□□ 1.16
SMN1-211ENST00000625245 WNT8AQ9H1J5 351 aa22.3■■□□□ 1.16
SMN1-211ENST00000625245 PRDM6Q9NQX0 595 aa22.3■■□□□ 1.16
SMN1-211ENST00000625245 GPHNQ9NQX3 736 aaPredicted RBP22.3■■□□□ 1.16
SMN1-211ENST00000625245 TRMT13Q9NUP7 481 aaKnown RBP22.3■■□□□ 1.16
SMN1-211ENST00000625245 CCDC171Q6TFL3 1326 aa22.3■■□□□ 1.16
SMN1-211ENST00000625245 LOC102724159A0A0B4J2E5 919 aa22.29■■□□□ 1.16
SMN1-211ENST00000625245 IGFBP4P22692 258 aa22.29■■□□□ 1.16
SMN1-211ENST00000625245 CPT1AP50416 773 aa22.29■■□□□ 1.16
SMN1-211ENST00000625245 ZNF543Q08ER8 600 aa22.29■■□□□ 1.16
SMN1-211ENST00000625245 HDAC1Q13547 482 aaPredicted RBP22.29■■□□□ 1.16
SMN1-211ENST00000625245 PWP2Q15269 919 aaKnown RBP22.29■■□□□ 1.16
SMN1-211ENST00000625245 AKNAD1Q5T1N1 836 aa22.29■■□□□ 1.16
SMN1-211ENST00000625245 TTC14Q96N46 770 aa22.29■■□□□ 1.16
SMN1-211ENST00000625245 LNPKQ9C0E8 428 aa22.29■■□□□ 1.16
SMN1-211ENST00000625245 SLC28A3Q9HAS3 691 aa22.29■■□□□ 1.16
SMN1-211ENST00000625245 PNMA2Q9UL42 364 aa22.29■■□□□ 1.16
SMN1-211ENST00000625245 RBM47A0AV96 593 aaKnown RBP22.28■■□□□ 1.16
SMN1-211ENST00000625245 ZBBXA8MT70 800 aa22.28■■□□□ 1.16
SMN1-211ENST00000625245 SUPT20HL2P0C7V6 817 aa22.28■■□□□ 1.16
SMN1-211ENST00000625245 CYP2C9P11712 490 aa22.28■■□□□ 1.16
SMN1-211ENST00000625245 RABGGTBP53611 331 aa22.28■■□□□ 1.16
SMN1-211ENST00000625245 RPS6P62753 249 aaKnown RBP22.28■■□□□ 1.16
SMN1-211ENST00000625245 PURAQ00577 322 aaKnown RBP22.28■■□□□ 1.16
SMN1-211ENST00000625245 FAM47CQ5HY64 1035 aa22.28■■□□□ 1.16
SMN1-211ENST00000625245 TJAP1Q5JTD0 557 aa22.28■■□□□ 1.16
SMN1-211ENST00000625245 MPHOSPH6Q99547 160 aaKnown RBP22.28■■□□□ 1.16
SMN1-211ENST00000625245 ZKSCAN3Q9BRR0 538 aa22.28■■□□□ 1.16
SMN1-211ENST00000625245 MTG1Q9BT17 334 aaPredicted RBP22.28■■□□□ 1.16
SMN1-211ENST00000625245 YBX2Q9Y2T7 364 aaKnown RBP22.28■■□□□ 1.16
SMN1-211ENST00000625245 SLC4A7Q9Y6M7 1214 aa22.28■■□□□ 1.16
SMN1-211ENST00000625245 ZMYM6O95789 1325 aa22.28■■□□□ 1.16
SMN1-211ENST00000625245 GOLGA8HP0CJ92 632 aa22.27■■□□□ 1.16
SMN1-211ENST00000625245 PPP2R5BQ15173 497 aa22.27■■□□□ 1.16
SMN1-211ENST00000625245 CCDC85BQ15834 202 aaPredicted RBP22.27■■□□□ 1.16
SMN1-211ENST00000625245 USH1GQ495M9 461 aa22.27■■□□□ 1.16
SMN1-211ENST00000625245 BRDTQ58F21 947 aaPredicted RBP22.27■■□□□ 1.16
SMN1-211ENST00000625245 TBC1D10CQ8IV04 446 aa22.27■■□□□ 1.16
SMN1-211ENST00000625245 TNKSO95271 1327 aa22.27■■□□□ 1.16
SMN1-211ENST00000625245 PCP11498 1178 aaKnown RBP22.26■■□□□ 1.15
SMN1-211ENST00000625245 ADGRE1Q14246 886 aa22.26■■□□□ 1.15
SMN1-211ENST00000625245 B4GALNT3Q6L9W6 998 aa22.26■■□□□ 1.15
SMN1-211ENST00000625245 DEFB128Q7Z7B8 93 aa22.26■■□□□ 1.15
SMN1-211ENST00000625245 TICAM2Q86XR7 235 aa22.26■■□□□ 1.15
SMN1-211ENST00000625245 PPP1R13LQ8WUF5 828 aa22.26■■□□□ 1.15
SMN1-211ENST00000625245 COPS5Q92905 334 aa22.26■■□□□ 1.15
SMN1-211ENST00000625245 RNF41Q9H4P4 317 aaPredicted RBP22.26■■□□□ 1.15
SMN1-211ENST00000625245 SCN5AQ14524 2016 aa22.26■■□□□ 1.15
SMN1-211ENST00000625245 MFAP1P55081 439 aaKnown RBP22.25■■□□□ 1.15
SMN1-211ENST00000625245 NBPF20Q3BBV1 942 aa22.25■■□□□ 1.15
SMN1-211ENST00000625245 SCFD2Q8WU76 684 aa22.25■■□□□ 1.15
SMN1-211ENST00000625245 ESR2Q92731 530 aa22.25■■□□□ 1.15
SMN1-211ENST00000625245 UBA5Q9GZZ9 404 aa22.25■■□□□ 1.15
SMN1-211ENST00000625245 CPVLQ9H3G5 476 aa22.25■■□□□ 1.15
SMN1-211ENST00000625245 WDR19Q8NEZ3 1342 aa22.25■■□□□ 1.15
SMN1-211ENST00000625245 RAD50Q92878 1312 aa22.25■■□□□ 1.15
SMN1-211ENST00000625245 TTC28Q96AY4 2481 aa22.24■■□□□ 1.15
SMN1-211ENST00000625245 B4DLN1 442 aa22.24■■□□□ 1.15
SMN1-211ENST00000625245 NKRFO15226 690 aaKnown RBP eCLIP22.24■■□□□ 1.15
SMN1-211ENST00000625245 SNHG28P0DPA3 235 aa22.24■■□□□ 1.15
SMN1-211ENST00000625245 TXNP10599 105 aaKnown RBP22.24■■□□□ 1.15
SMN1-211ENST00000625245 MYOGP15173 224 aa22.24■■□□□ 1.15
SMN1-211ENST00000625245 SDSP20132 328 aa22.24■■□□□ 1.15
SMN1-211ENST00000625245 MRPL12P52815 198 aaKnown RBP22.24■■□□□ 1.15
SMN1-211ENST00000625245 CHMP4BP1P59074 171 aa22.24■■□□□ 1.15
SMN1-211ENST00000625245 DNERQ8NFT8 737 aa22.24■■□□□ 1.15
SMN1-211ENST00000625245 NEDD4P46934 1319 aa22.24■■□□□ 1.15
SMN1-211ENST00000625245 SCN10AQ9Y5Y9 1956 aa22.23■■□□□ 1.15
SMN1-211ENST00000625245 ZNF213O14771 459 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms