RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 HPSEQ9Y251 543 aa11.79□□□□□ -0.52
ATRX-216ENST00000624403 SRPRBQ9Y5M8 271 aaKnown RBP11.79□□□□□ -0.52
ATRX-216ENST00000624403 CTNND1O60716 968 aaKnown RBP11.78□□□□□ -0.52
ATRX-216ENST00000624403 LMOD1P29536 600 aaPredicted RBP11.78□□□□□ -0.52
ATRX-216ENST00000624403 SNAP25P60880 206 aa11.78□□□□□ -0.52
ATRX-216ENST00000624403 IKQ13123 557 aaPredicted RBP11.78□□□□□ -0.52
ATRX-216ENST00000624403 ZYXQ15942 572 aaKnown RBP11.78□□□□□ -0.52
ATRX-216ENST00000624403 INF2Q27J81 1249 aa11.78□□□□□ -0.52
ATRX-216ENST00000624403 FAM83BQ5T0W9 1011 aa11.78□□□□□ -0.52
ATRX-216ENST00000624403 PRAMEF18Q5VWM3 479 aa11.78□□□□□ -0.52
ATRX-216ENST00000624403 DCAF15Q66K64 600 aa11.78□□□□□ -0.52
ATRX-216ENST00000624403 CKAP2LQ8IYA6 745 aa11.78□□□□□ -0.52
ATRX-216ENST00000624403 WNT2BQ93097 391 aa11.78□□□□□ -0.52
ATRX-216ENST00000624403 HOOK2Q96ED9 719 aa11.78□□□□□ -0.52
ATRX-216ENST00000624403 ZNF341Q9BYN7 854 aa11.78□□□□□ -0.52
ATRX-216ENST00000624403 SH2D4AQ9H788 454 aa11.78□□□□□ -0.52
ATRX-216ENST00000624403 VCPKMTQ9H867 229 aa11.78□□□□□ -0.52
ATRX-216ENST00000624403 RIC8AQ9NPQ8 531 aa11.78□□□□□ -0.52
ATRX-216ENST00000624403 GINM1Q9NU53 330 aa11.78□□□□□ -0.52
ATRX-216ENST00000624403 TMEM260Q9NX78 707 aa11.78□□□□□ -0.52
ATRX-216ENST00000624403 BIN2Q9UBW5 565 aaPredicted RBP11.78□□□□□ -0.52
ATRX-216ENST00000624403 PPP2R3BQ9Y5P8 575 aa11.78□□□□□ -0.52
ATRX-216ENST00000624403 CTAGE5O15320 804 aa11.77□□□□□ -0.53
ATRX-216ENST00000624403 INPP5BP32019 993 aa11.77□□□□□ -0.53
ATRX-216ENST00000624403 MCM7P33993 719 aa11.77□□□□□ -0.53
ATRX-216ENST00000624403 ATP2C1P98194 919 aaPredicted RBP11.77□□□□□ -0.53
ATRX-216ENST00000624403 PTGDRQ13258 359 aa11.77□□□□□ -0.53
ATRX-216ENST00000624403 NONOQ15233 471 aaKnown RBP eCLIP11.77□□□□□ -0.53
ATRX-216ENST00000624403 SPECC1Q5M775 1068 aa11.77□□□□□ -0.53
ATRX-216ENST00000624403 JAKMIP3Q5VZ66 844 aa11.77□□□□□ -0.53
ATRX-216ENST00000624403 REXO1Q8N1G1 1221 aaKnown RBP11.77□□□□□ -0.53
ATRX-216ENST00000624403 CSRNP2Q9H175 543 aa11.77□□□□□ -0.53
ATRX-216ENST00000624403 ADARB2Q9NS39 739 aaKnown RBP11.77□□□□□ -0.53
ATRX-216ENST00000624403 ZNF112Q9UJU3 913 aa11.77□□□□□ -0.53
ATRX-216ENST00000624403 PRR12Q9ULL5 1215 aa11.77□□□□□ -0.53
ATRX-216ENST00000624403 ZNF202O95125 648 aa11.76□□□□□ -0.53
ATRX-216ENST00000624403 CCDC192P0DO97 292 aa11.76□□□□□ -0.53
ATRX-216ENST00000624403 SYKP43405 635 aa11.76□□□□□ -0.53
ATRX-216ENST00000624403 TYRO3Q06418 890 aa11.76□□□□□ -0.53
ATRX-216ENST00000624403 UBE2SQ16763 222 aa11.76□□□□□ -0.53
ATRX-216ENST00000624403 THSD4Q6ZMP0 1018 aa11.76□□□□□ -0.53
ATRX-216ENST00000624403 FBXO11Q86XK2 927 aa11.76□□□□□ -0.53
ATRX-216ENST00000624403 C4orf32Q8N8J7 132 aa11.76□□□□□ -0.53
ATRX-216ENST00000624403 CUL5Q93034 780 aa11.76□□□□□ -0.53
ATRX-216ENST00000624403 FERMT2Q96AC1 680 aa11.76□□□□□ -0.53
ATRX-216ENST00000624403 FEZ1Q99689 392 aa11.76□□□□□ -0.53
ATRX-216ENST00000624403 PANK2Q9BZ23 570 aa11.76□□□□□ -0.53
ATRX-216ENST00000624403 FAM13BQ9NYF5 915 aa11.76□□□□□ -0.53
ATRX-216ENST00000624403 KCNH3Q9ULD8 1083 aa11.76□□□□□ -0.53
ATRX-216ENST00000624403 PCDHA1Q9Y5I3 950 aa11.76□□□□□ -0.53
ATRX-216ENST00000624403 PITPNM2Q9BZ72 1349 aa11.76□□□□□ -0.53
ATRX-216ENST00000624403 CLK2P49760 499 aaKnown RBP11.75□□□□□ -0.53
ATRX-216ENST00000624403 STAT2P52630 851 aa11.75□□□□□ -0.53
ATRX-216ENST00000624403 MRPL12P52815 198 aaKnown RBP11.75□□□□□ -0.53
ATRX-216ENST00000624403 GPR162Q16538 588 aa11.75□□□□□ -0.53
ATRX-216ENST00000624403 IL17AQ16552 155 aa11.75□□□□□ -0.53
ATRX-216ENST00000624403 SCYL3Q8IZE3 742 aa11.75□□□□□ -0.53
ATRX-216ENST00000624403 RNF214Q8ND24 703 aa11.75□□□□□ -0.53
ATRX-216ENST00000624403 CHURC1Q8WUH1 139 aa11.75□□□□□ -0.53
ATRX-216ENST00000624403 TIGD1Q96MW7 591 aa11.75□□□□□ -0.53
ATRX-216ENST00000624403 SDF4Q9BRK5 362 aa11.75□□□□□ -0.53
ATRX-216ENST00000624403 AMNQ9BXJ7 453 aa11.75□□□□□ -0.53
ATRX-216ENST00000624403 KIAA1683Q9H0B3 1180 aa11.75□□□□□ -0.53
ATRX-216ENST00000624403 PSTPIP2Q9H939 334 aa11.75□□□□□ -0.53
ATRX-216ENST00000624403 SEPT9Q9UHD8 586 aaPredicted RBP11.75□□□□□ -0.53
ATRX-216ENST00000624403 SSC5DA1L4H1 1573 aa11.75□□□□□ -0.53
ATRX-216ENST00000624403 VWA3AA6NCI4 1184 aa11.74□□□□□ -0.53
ATRX-216ENST00000624403 PLA2G6O60733 806 aa11.74□□□□□ -0.53
ATRX-216ENST00000624403 TAL1P17542 331 aaPredicted RBP11.74□□□□□ -0.53
ATRX-216ENST00000624403 MLLT3P42568 568 aaPredicted RBP11.74□□□□□ -0.53
ATRX-216ENST00000624403 LETM2Q2VYF4 491 aa11.74□□□□□ -0.53
ATRX-216ENST00000624403 SUPT20HL1Q3ZLR7 823 aa11.74□□□□□ -0.53
ATRX-216ENST00000624403 SASS6Q6UVJ0 657 aa11.74□□□□□ -0.53
ATRX-216ENST00000624403 USP49Q70CQ1 688 aa11.74□□□□□ -0.53
ATRX-216ENST00000624403 NEK8Q86SG6 692 aa11.74□□□□□ -0.53
ATRX-216ENST00000624403 FAM160B2Q86V87 743 aa11.74□□□□□ -0.53
ATRX-216ENST00000624403 TBCKQ8TEA7 893 aa11.74□□□□□ -0.53
ATRX-216ENST00000624403 ZKSCAN4Q969J2 545 aaPredicted RBP11.74□□□□□ -0.53
ATRX-216ENST00000624403 KIFC2Q96AC6 838 aa11.74□□□□□ -0.53
ATRX-216ENST00000624403 WRNIP1Q96S55 665 aa11.74□□□□□ -0.53
ATRX-216ENST00000624403 GLT8D2Q9H1C3 349 aa11.74□□□□□ -0.53
ATRX-216ENST00000624403 TMEM60Q9H2L4 133 aa11.74□□□□□ -0.53
ATRX-216ENST00000624403 CDHR5Q9HBB8 845 aa11.74□□□□□ -0.53
ATRX-216ENST00000624403 TSKSQ9UJT2 592 aa11.74□□□□□ -0.53
ATRX-216ENST00000624403 FEM1BQ9UK73 627 aa11.74□□□□□ -0.53
ATRX-216ENST00000624403 FZD1Q9UP38 647 aa11.74□□□□□ -0.53
ATRX-216ENST00000624403 ATAD5Q96QE3 1844 aa11.74□□□□□ -0.53
ATRX-216ENST00000624403 ADM5C9JUS6 153 aa11.73□□□□□ -0.53
ATRX-216ENST00000624403 EDIL3O43854 480 aa11.73□□□□□ -0.53
ATRX-216ENST00000624403 USH1GQ495M9 461 aa11.73□□□□□ -0.53
ATRX-216ENST00000624403 LONRF3Q496Y0 759 aa11.73□□□□□ -0.53
ATRX-216ENST00000624403 ARL6IP4Q66PJ3 421 aaKnown RBP11.73□□□□□ -0.53
ATRX-216ENST00000624403 CCDC174Q6PII3 467 aa11.73□□□□□ -0.53
ATRX-216ENST00000624403 KRBA2Q6ZNG9 492 aa11.73□□□□□ -0.53
ATRX-216ENST00000624403 SYMPKQ92797 1274 aaKnown RBP11.73□□□□□ -0.53
ATRX-216ENST00000624403 DCPSQ96C86 337 aaKnown RBP11.73□□□□□ -0.53
ATRX-216ENST00000624403 WDR18Q9BV38 432 aa11.73□□□□□ -0.53
ATRX-216ENST00000624403 RANBP17Q9H2T7 1088 aaKnown RBP11.73□□□□□ -0.53
ATRX-216ENST00000624403 PICK1Q9NRD5 415 aa11.73□□□□□ -0.53
ATRX-216ENST00000624403 FBXO28Q9NVF7 368 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms