RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 POLA2Q14181 598 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 ZNF268Q14587 947 aaPredicted RBP8.72□□□□□ -1.01
VPS11-209ENST00000622309 LMBRD2Q68DH5 695 aaPredicted RBP8.72□□□□□ -1.01
VPS11-209ENST00000622309 OTUD7BQ6GQQ9 843 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 TMEM110Q86TL2 294 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 C1orf131Q8NDD1 294 aaKnown RBP8.72□□□□□ -1.01
VPS11-209ENST00000622309 DDX17Q92841 729 aaKnown RBP8.72□□□□□ -1.01
VPS11-209ENST00000622309 FGD4Q96M96 766 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 MTRQ99707 1265 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 PEAK1Q9H792 1746 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 GCOM1H8Y6P7 765 aaPredicted RBP8.72□□□□□ -1.01
VPS11-209ENST00000622309 MYZAPP0CAP1 466 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 GNAQP50148 359 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 EVA1CP58658 441 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 ERICH1Q86X53 443 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 IFT20Q8IY31 132 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 IQCKQ8N0W5 287 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 CACTIN-AS1Q8N1I8 211 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 SENP2Q9HC62 589 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 NCOA5Q9HCD5 579 aaKnown RBP8.72□□□□□ -1.01
VPS11-209ENST00000622309 MKS1Q9NXB0 559 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.72□□□□□ -1.01
VPS11-209ENST00000622309 SWAP70Q9UH65 585 aa8.72□□□□□ -1.01
VPS11-209ENST00000622309 CCDC194A0A1B0GVG4 234 aa8.71□□□□□ -1.01
VPS11-209ENST00000622309 NDUFA10O95299 355 aa8.71□□□□□ -1.01
VPS11-209ENST00000622309 CTDNEP1O95476 244 aa8.71□□□□□ -1.01
VPS11-209ENST00000622309 MKRN4PQ13434 485 aaPredicted RBP8.71□□□□□ -1.01
VPS11-209ENST00000622309 FAM133BQ5BKY9 247 aaKnown RBP8.71□□□□□ -1.01
VPS11-209ENST00000622309 C8orf74Q6P047 294 aa8.71□□□□□ -1.01
VPS11-209ENST00000622309 BARGINQ6ZT62 677 aa8.71□□□□□ -1.01
VPS11-209ENST00000622309 MAEAQ7L5Y9 396 aa8.71□□□□□ -1.01
VPS11-209ENST00000622309 LCA5Q86VQ0 697 aa8.71□□□□□ -1.01
VPS11-209ENST00000622309 C17orf50Q8WW18 174 aa8.71□□□□□ -1.01
VPS11-209ENST00000622309 IFT81Q8WYA0 676 aa8.71□□□□□ -1.01
VPS11-209ENST00000622309 TAF1DQ9H5J8 278 aaPredicted RBP8.71□□□□□ -1.01
VPS11-209ENST00000622309 ABHD10Q9NUJ1 306 aa8.71□□□□□ -1.01
VPS11-209ENST00000622309 SBNO1A3KN83 1393 aa8.71□□□□□ -1.02
VPS11-209ENST00000622309 PHF20L1A8MW92 1017 aa8.71□□□□□ -1.02
VPS11-209ENST00000622309 PFDN1O60925 122 aa8.71□□□□□ -1.02
VPS11-209ENST00000622309 HIP1RO75146 1068 aa8.71□□□□□ -1.02
VPS11-209ENST00000622309 SASH1O94885 1247 aa8.71□□□□□ -1.02
VPS11-209ENST00000622309 GYPCP04921 128 aa8.71□□□□□ -1.02
VPS11-209ENST00000622309 TMOD1P28289 359 aa8.71□□□□□ -1.02
VPS11-209ENST00000622309 KRT9P35527 623 aa8.71□□□□□ -1.02
VPS11-209ENST00000622309 FLIIQ13045 1269 aa8.71□□□□□ -1.02
VPS11-209ENST00000622309 LBRQ14739 615 aaKnown RBP8.71□□□□□ -1.02
VPS11-209ENST00000622309 TMEM154Q6P9G4 183 aa8.71□□□□□ -1.02
VPS11-209ENST00000622309 CACNA2D4Q7Z3S7 1137 aa8.71□□□□□ -1.02
VPS11-209ENST00000622309 METTL16Q86W50 562 aaKnown RBP8.71□□□□□ -1.02
VPS11-209ENST00000622309 CD302Q8IX05 232 aa8.71□□□□□ -1.02
VPS11-209ENST00000622309 SPICE1Q8N0Z3 855 aa8.71□□□□□ -1.02
VPS11-209ENST00000622309 NEUROD6Q96NK8 337 aa8.71□□□□□ -1.02
VPS11-209ENST00000622309 UBAP1Q9NZ09 502 aa8.71□□□□□ -1.02
VPS11-209ENST00000622309 ATXN10Q9UBB4 475 aa8.71□□□□□ -1.02
VPS11-209ENST00000622309 MAN1B1Q9UKM7 699 aa8.71□□□□□ -1.02
VPS11-209ENST00000622309 MROH7-TTC4A0A0A0MT08 1334 aa8.71□□□□□ -1.02
VPS11-209ENST00000622309 GPR75-ASB3A0A0A6YYF3 556 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 A0A0D9SFI3 127 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 C5orf60A6NFR6 353 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 CYP27B1O15528 508 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 RRM1P23921 792 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 GUCY2FP51841 1108 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 DEUP1Q05D60 604 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 PHF24Q9UPV7 400 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 ASB3Q9Y575 518 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 ABCC6O95255 1503 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 USP31Q70CQ4 1352 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 NALCNQ8IZF0 1738 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 FLOT1O75955 427 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 NQO1P15559 274 aaKnown RBP8.7□□□□□ -1.02
VPS11-209ENST00000622309 BMP6P22004 513 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 PAFAH1B1P43034 410 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 GJA8P48165 433 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 KRT83P78385 493 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 ADAM9Q13443 819 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 ZNF827Q17R98 1081 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 SLC9C2Q5TAH2 1124 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 KLHL10Q6JEL2 608 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 FOXP4Q8IVH2 680 aaPredicted RBP8.7□□□□□ -1.02
VPS11-209ENST00000622309 GBP7Q8N8V2 638 aaPredicted RBP8.7□□□□□ -1.02
VPS11-209ENST00000622309 SPATA4Q8NEY3 305 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 FBF1Q8TES7 1133 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 RAPGEF5Q92565 580 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 USP44Q9H0E7 712 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 PREBQ9HCU5 417 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 MAGEC2Q9UBF1 373 aaPredicted RBP8.7□□□□□ -1.02
VPS11-209ENST00000622309 STK38LQ9Y2H1 464 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 BCL9LQ86UU0 1499 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 USP42Q9H9J4 1324 aaKnown RBP8.7□□□□□ -1.02
VPS11-209ENST00000622309 ANO9A1A5B4 782 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 LGR5O75473 907 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 ALDH1L1O75891 902 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 ANXA1P04083 346 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 FAM200BP0CF97 657 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 KLC1Q07866 573 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 SLC39A14Q15043 492 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 ANO7Q6IWH7 933 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 PRCCQ92733 491 aaPredicted RBP8.7□□□□□ -1.02
VPS11-209ENST00000622309 KIFAP3Q92845 792 aa8.7□□□□□ -1.02
VPS11-209ENST00000622309 VCX3BQ9H321 246 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms