RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 FAM182BQ5T319 152 aa12.62□□□□□ -0.39
PCDHGA11-203ENST00000622044 NAA35Q5VZE5 725 aa12.62□□□□□ -0.39
PCDHGA11-203ENST00000622044 SV2BQ7L1I2 683 aa12.62□□□□□ -0.39
PCDHGA11-203ENST00000622044 SELENOSQ9BQE4 189 aa12.62□□□□□ -0.39
PCDHGA11-203ENST00000622044 BIN2Q9UBW5 565 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA11-203ENST00000622044 CAPN11Q9UMQ6 739 aa12.62□□□□□ -0.39
PCDHGA11-203ENST00000622044 SETD1AO15047 1707 aaKnown RBP12.62□□□□□ -0.39
PCDHGA11-203ENST00000622044 POLR2FP61218 127 aaKnown RBP12.62□□□□□ -0.39
PCDHGA11-203ENST00000622044 CACNB1Q02641 598 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA11-203ENST00000622044 TMEM266Q2M3C6 531 aa12.62□□□□□ -0.39
PCDHGA11-203ENST00000622044 ANKRD40Q6AI12 368 aa12.62□□□□□ -0.39
PCDHGA11-203ENST00000622044 TACC3Q9Y6A5 838 aa12.62□□□□□ -0.39
PCDHGA11-203ENST00000622044 OVOS2A0A0G2JMS6 1433 aa12.62□□□□□ -0.39
PCDHGA11-203ENST00000622044 LRRC53A6NM62 1247 aa12.62□□□□□ -0.39
PCDHGA11-203ENST00000622044 FGFR1OPO95684 399 aaKnown RBP12.62□□□□□ -0.39
PCDHGA11-203ENST00000622044 KCNQ4P56696 695 aa12.62□□□□□ -0.39
PCDHGA11-203ENST00000622044 ACTN3Q08043 901 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA11-203ENST00000622044 STK4Q13043 487 aa12.62□□□□□ -0.39
PCDHGA11-203ENST00000622044 KIAA0753Q2KHM9 967 aa12.62□□□□□ -0.39
PCDHGA11-203ENST00000622044 CNNM4Q6P4Q7 775 aa12.62□□□□□ -0.39
PCDHGA11-203ENST00000622044 UHMK1Q8TAS1 419 aaKnown RBP12.62□□□□□ -0.39
PCDHGA11-203ENST00000622044 DYNLL2Q96FJ2 89 aa12.62□□□□□ -0.39
PCDHGA11-203ENST00000622044 EVX2Q03828 476 aa12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 PPP2R5BQ15173 497 aa12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 ALX1Q15699 326 aa12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 PKN1Q16512 942 aa12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 APTXQ7Z2E3 356 aaKnown RBP12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 ADSSL1Q8N142 457 aa12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 CCDC155Q8N6L0 562 aa12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 TMEM60Q9H2L4 133 aa12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 RBM12Q9NTZ6 932 aaKnown RBP12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 SNX12Q9UMY4 172 aa12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 CSF1RP07333 972 aa12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 NR1D1P20393 614 aa12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 CTNNA1P35221 906 aaKnown RBP12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 ATP6V1AP38606 617 aa12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 SLC9C1Q4G0N8 1177 aa12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 ADGRA1Q86SQ6 560 aa12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 DPH5Q9H2P9 285 aa12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 VIPAS39Q9H9C1 493 aa12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 EIF3HO15372 352 aaKnown RBP eCLIP12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 ECM2O94769 699 aaPredicted RBP12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 CARSP49589 748 aaKnown RBP12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 DCAF17Q5H9S7 520 aaPredicted RBP12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 STAG2Q8N3U4 1231 aa12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 FNBP4Q8N3X1 1017 aaPredicted RBP12.61□□□□□ -0.39
PCDHGA11-203ENST00000622044 TCRBV5S4A2TA0A5A2 114 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 USP17L3A6NCW0 530 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 USP17L4A6NCW7 530 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 WTIPA6NIX2 430 aaPredicted RBP12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 GCOM1H8Y6P7 765 aaPredicted RBP12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 USP17L8P0C7I0 530 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 MYZAPP0CAP1 466 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 CCNE1P24864 410 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 TNNC1P63316 161 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 AMPD2Q01433 879 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 TXNRD1Q16881 649 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 SUSD4Q5VX71 490 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 USP17L1Q7RTZ2 530 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 CCDC170Q8IYT3 715 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 ZIM3Q96PE6 472 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 AP1M1Q9BXS5 423 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 NDST4Q9H3R1 872 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 GOLPH3Q9H4A6 298 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 THAP9Q9H5L6 903 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 CHD2O14647 1828 aaKnown RBP12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 GUCY2CP25092 1073 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 SLC1A4P43007 532 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 KLHL30Q0D2K2 578 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 OR2W6PQ8NHA6 318 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 SNX29Q8TEQ0 813 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 DYDC1Q8WWB3 177 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 LSM14BQ9BX40 385 aaKnown RBP12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 ANKIB1Q9P2G1 1089 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 ADAMTS1Q9UHI8 967 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 LRRC37A3O60309 1634 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 GBP2P32456 591 aaPredicted RBP12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 PBX1P40424 430 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 IKQ13123 557 aaPredicted RBP12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 SF3B2Q13435 895 aaKnown RBP12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 KRT71Q3SY84 523 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 TRMT1LQ7Z2T5 733 aaKnown RBP12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 TBC1D5Q92609 795 aa12.6□□□□□ -0.39
PCDHGA11-203ENST00000622044 HNRNPH1P31943 449 aaKnown RBP12.59□□□□□ -0.39
PCDHGA11-203ENST00000622044 SPATA31A3Q5VYP0 1347 aa12.59□□□□□ -0.39
PCDHGA11-203ENST00000622044 SMCO2A6NFE2 343 aa12.59□□□□□ -0.39
PCDHGA11-203ENST00000622044 PALMO75781 387 aa12.59□□□□□ -0.39
PCDHGA11-203ENST00000622044 RPSAP08865 295 aaKnown RBP12.59□□□□□ -0.39
PCDHGA11-203ENST00000622044 OR52Z1P0C646 297 aa12.59□□□□□ -0.39
PCDHGA11-203ENST00000622044 NONOQ15233 471 aaKnown RBP eCLIP12.59□□□□□ -0.39
PCDHGA11-203ENST00000622044 SFMBT2Q5VUG0 894 aa12.59□□□□□ -0.39
PCDHGA11-203ENST00000622044 KRT79Q5XKE5 535 aa12.59□□□□□ -0.39
PCDHGA11-203ENST00000622044 PDXDC2PQ6P474 469 aa12.59□□□□□ -0.39
PCDHGA11-203ENST00000622044 WDR59Q6PJI9 974 aa12.59□□□□□ -0.39
PCDHGA11-203ENST00000622044 CCDC84Q86UT8 332 aaPredicted RBP12.59□□□□□ -0.39
PCDHGA11-203ENST00000622044 PNMA8AQ86V59 439 aaPredicted RBP12.59□□□□□ -0.39
PCDHGA11-203ENST00000622044 TSEN2Q8NCE0 465 aaKnown RBP12.59□□□□□ -0.39
PCDHGA11-203ENST00000622044 TBC1D31Q96DN5 1066 aa12.59□□□□□ -0.39
PCDHGA11-203ENST00000622044 MTRQ99707 1265 aa12.59□□□□□ -0.39
PCDHGA11-203ENST00000622044 C6orf50Q9HD87 102 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms