RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 KRT40Q6A162 431 aa12.6□□□□□ -0.39
CLTC-215ENST00000621829 ERFP50548 548 aa12.6□□□□□ -0.39
CLTC-215ENST00000621829 CEP55Q53EZ4 464 aa12.6□□□□□ -0.39
CLTC-215ENST00000621829 BBOF1Q8ND07 529 aa12.6□□□□□ -0.39
CLTC-215ENST00000621829 COQ7Q99807 217 aa12.6□□□□□ -0.39
CLTC-215ENST00000621829 TRIP13Q15645 432 aaPredicted RBP12.6□□□□□ -0.39
CLTC-215ENST00000621829 CC2D1AQ6P1N0 951 aaPredicted RBP12.6□□□□□ -0.39
CLTC-215ENST00000621829 STX18Q9P2W9 335 aaKnown RBP12.6□□□□□ -0.39
CLTC-215ENST00000621829 STAM2O75886 525 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 WDR75Q8IWA0 830 aaKnown RBP12.59□□□□□ -0.39
CLTC-215ENST00000621829 TSPYL6Q8N831 410 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 VPS54Q9P1Q0 977 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 JAG2Q9Y219 1238 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 PTPN23Q9H3S7 1636 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 DAPK1P53355 1430 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 PDS5BQ9NTI5 1447 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 GNL1P36915 607 aaPredicted RBP12.59□□□□□ -0.39
CLTC-215ENST00000621829 COPB1P53618 953 aaKnown RBP12.59□□□□□ -0.39
CLTC-215ENST00000621829 UPF3AQ9H1J1 476 aaKnown RBP12.59□□□□□ -0.39
CLTC-215ENST00000621829 EXOC1LA0A1B0GW35 172 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 ARHGEF35A5YM69 484 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 XAGE3Q8WTP9 111 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 CFAP36Q96G28 342 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 IL15P40933 162 aaPredicted RBP12.59□□□□□ -0.39
CLTC-215ENST00000621829 NLRP14Q86W24 1093 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 PHF23Q9BUL5 403 aaPredicted RBP12.59□□□□□ -0.39
CLTC-215ENST00000621829 EPC1Q9H2F5 836 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 PPARGC1AQ9UBK2 798 aaKnown RBP12.59□□□□□ -0.39
CLTC-215ENST00000621829 CLIC4Q9Y696 253 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 RALGAPBQ86X10 1494 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 DIAPH2O60879 1101 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 PROSER2Q86WR7 435 aaPredicted RBP12.59□□□□□ -0.39
CLTC-215ENST00000621829 NSMCE1Q8WV22 266 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 NAP1L4Q99733 375 aaKnown RBP12.59□□□□□ -0.39
CLTC-215ENST00000621829 SAP30BPQ9UHR5 308 aaKnown RBP12.59□□□□□ -0.39
CLTC-215ENST00000621829 NOP56O00567 594 aaKnown RBP12.59□□□□□ -0.39
CLTC-215ENST00000621829 NVLO15381 856 aaKnown RBP12.59□□□□□ -0.39
CLTC-215ENST00000621829 ARHGDIAP52565 204 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 UBE3AQ05086 875 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 CYTH1Q15438 398 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 DNM3Q9UQ16 869 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 TMA7Q9Y2S6 64 aaKnown RBP12.59□□□□□ -0.39
CLTC-215ENST00000621829 CDKL2Q92772 493 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 LRRC37BQ96QE4 947 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 TMEM60Q9H2L4 133 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 ATP11BQ9Y2G3 1177 aa12.59□□□□□ -0.39
CLTC-215ENST00000621829 MT-ND3P03897 115 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 SPATA1Q5VX52 437 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 CATSPER3Q86XQ3 398 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 TDRD7Q8NHU6 1098 aaKnown RBP12.58□□□□□ -0.4
CLTC-215ENST00000621829 FAM161BQ96MY7 647 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 SH3GL1Q99961 368 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 CCDC61Q9Y6R9 512 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 FAM135AQ9P2D6 1515 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 MAGOHP61326 146 aaKnown RBP12.58□□□□□ -0.4
CLTC-215ENST00000621829 THAP11Q96EK4 314 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 SPATA17Q96L03 361 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 ATP5HO75947 161 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 KRT4P19013 534 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 NAIF1Q69YI7 327 aaPredicted RBP12.58□□□□□ -0.4
CLTC-215ENST00000621829 CHMP6Q96FZ7 201 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 NDE1Q9NXR1 346 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 SNX5Q9Y5X3 404 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 SRGAP2O75044 1071 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 SEC24DO94855 1032 aaPredicted RBP12.58□□□□□ -0.4
CLTC-215ENST00000621829 APOA1P02647 267 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 ARID5BQ14865 1188 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 SGO2Q562F6 1265 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 FBXL13Q8NEE6 735 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 UBAP1Q9NZ09 502 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 GGT7Q9UJ14 662 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 ARHGAP26Q9UNA1 814 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 ITKQ08881 620 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 DPCR1Q3MIW9 517 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 LONP2Q86WA8 852 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 MBD4O95243 580 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 CCDC117Q8IWD4 279 aaPredicted RBP12.58□□□□□ -0.4
CLTC-215ENST00000621829 METTL14Q9HCE5 456 aaKnown RBP12.58□□□□□ -0.4
CLTC-215ENST00000621829 EXOC7Q9UPT5 735 aa12.58□□□□□ -0.4
CLTC-215ENST00000621829 H7C0C1 242 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 SCG2P13521 617 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 TNNI1P19237 187 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 ATP5OP48047 213 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 HDAC4P56524 1084 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 TRIM15Q9C019 465 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 H7C1D1 291 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 COPS6Q7L5N1 327 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 DZIP3Q86Y13 1208 aaKnown RBP12.57□□□□□ -0.4
CLTC-215ENST00000621829 SMYD4Q8IYR2 804 aaPredicted RBP12.57□□□□□ -0.4
CLTC-215ENST00000621829 CMTR1Q8N1G2 835 aaKnown RBP12.57□□□□□ -0.4
CLTC-215ENST00000621829 CNGB3Q9NQW8 809 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 PCDHA7Q9UN72 937 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 PGRMC1O00264 195 aaKnown RBP12.57□□□□□ -0.4
CLTC-215ENST00000621829 VCAM1P19320 739 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 TMEM87BQ96K49 555 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 SFMBT1Q9UHJ3 866 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 TEKT2Q9UIF3 430 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 SGSM2O43147 1006 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 KCNA3P22001 575 aa12.57□□□□□ -0.4
CLTC-215ENST00000621829 PLCB4Q15147 1175 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms