RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 SNRNP48Q6IEG0 339 aaKnown RBP12.15□□□□□ -0.46
CPNE3-212ENST00000621783 NEK8Q86SG6 692 aa12.15□□□□□ -0.46
CPNE3-212ENST00000621783 RASAL3Q86YV0 1011 aa12.15□□□□□ -0.46
CPNE3-212ENST00000621783 JMYQ8N9B5 988 aa12.15□□□□□ -0.46
CPNE3-212ENST00000621783 MS4A4AQ96JQ5 239 aa12.15□□□□□ -0.46
CPNE3-212ENST00000621783 P2RX7Q99572 595 aaKnown RBP12.15□□□□□ -0.46
CPNE3-212ENST00000621783 ASCC2Q9H1I8 757 aaPredicted RBP12.15□□□□□ -0.46
CPNE3-212ENST00000621783 HOXC10Q9NYD6 342 aa12.15□□□□□ -0.46
CPNE3-212ENST00000621783 PCDHA7Q9UN72 937 aa12.15□□□□□ -0.46
CPNE3-212ENST00000621783 MORC2Q9Y6X9 1032 aaPredicted RBP12.15□□□□□ -0.46
CPNE3-212ENST00000621783 SMCHD1A6NHR9 2005 aa12.15□□□□□ -0.47
CPNE3-212ENST00000621783 CCL15-CCL14A0A0B4J2E2 113 aa12.14□□□□□ -0.47
CPNE3-212ENST00000621783 GOLGA6L4A6NEF3 574 aa12.14□□□□□ -0.47
CPNE3-212ENST00000621783 SPDYE3A6NKU9 549 aa12.14□□□□□ -0.47
CPNE3-212ENST00000621783 GCOM1H8Y6P7 765 aaPredicted RBP12.14□□□□□ -0.47
CPNE3-212ENST00000621783 CFBP00751 764 aa12.14□□□□□ -0.47
CPNE3-212ENST00000621783 POLR2MP0CAP2 368 aa12.14□□□□□ -0.47
CPNE3-212ENST00000621783 OSBPP22059 807 aa12.14□□□□□ -0.47
CPNE3-212ENST00000621783 HSD17B4P51659 736 aa12.14□□□□□ -0.47
CPNE3-212ENST00000621783 HERVK_113P62684 666 aa12.14□□□□□ -0.47
CPNE3-212ENST00000621783 ATP2C1P98194 919 aaPredicted RBP12.14□□□□□ -0.47
CPNE3-212ENST00000621783 GHRHRQ02643 423 aa12.14□□□□□ -0.47
CPNE3-212ENST00000621783 CCL15Q16663 113 aa12.14□□□□□ -0.47
CPNE3-212ENST00000621783 LETM2Q2VYF4 491 aa12.14□□□□□ -0.47
CPNE3-212ENST00000621783 MUM1L1Q5H9M0 696 aa12.14□□□□□ -0.47
CPNE3-212ENST00000621783 POTEEQ6S8J3 1075 aa12.14□□□□□ -0.47
CPNE3-212ENST00000621783 LBX2Q6XYB7 198 aa12.14□□□□□ -0.47
CPNE3-212ENST00000621783 MB21D1Q8N884 522 aa12.14□□□□□ -0.47
CPNE3-212ENST00000621783 BRI3BPQ8WY22 251 aa12.14□□□□□ -0.47
CPNE3-212ENST00000621783 TBC1D5Q92609 795 aa12.14□□□□□ -0.47
CPNE3-212ENST00000621783 TEX13BQ9BXU2 312 aa12.14□□□□□ -0.47
CPNE3-212ENST00000621783 HOMER2Q9NSB8 354 aa12.14□□□□□ -0.47
CPNE3-212ENST00000621783 RNF146Q9NTX7 359 aa12.14□□□□□ -0.47
CPNE3-212ENST00000621783 FBXO2Q9UK22 296 aaPredicted RBP12.14□□□□□ -0.47
CPNE3-212ENST00000621783 RIPK3Q9Y572 518 aa12.14□□□□□ -0.47
CPNE3-212ENST00000621783 MRVI1Q9Y6F6 885 aa12.14□□□□□ -0.47
CPNE3-212ENST00000621783 MYH7BA7E2Y1 1941 aa12.13□□□□□ -0.47
CPNE3-212ENST00000621783 EDIL3O43854 480 aa12.13□□□□□ -0.47
CPNE3-212ENST00000621783 CCNT1O60563 726 aaKnown RBP12.13□□□□□ -0.47
CPNE3-212ENST00000621783 TDP2O95551 362 aa12.13□□□□□ -0.47
CPNE3-212ENST00000621783 FOSP01100 380 aaPredicted RBP12.13□□□□□ -0.47
CPNE3-212ENST00000621783 SREBF1P36956 1147 aa12.13□□□□□ -0.47
CPNE3-212ENST00000621783 PTGDRQ13258 359 aa12.13□□□□□ -0.47
CPNE3-212ENST00000621783 ORC2Q13416 577 aaPredicted RBP12.13□□□□□ -0.47
CPNE3-212ENST00000621783 PLS1Q14651 629 aa12.13□□□□□ -0.47
CPNE3-212ENST00000621783 AXDND1Q5T1B0 1012 aaPredicted RBP12.13□□□□□ -0.47
CPNE3-212ENST00000621783 ADALQ6DHV7 355 aa12.13□□□□□ -0.47
CPNE3-212ENST00000621783 SAPCD2Q86UD0 394 aa12.13□□□□□ -0.47
CPNE3-212ENST00000621783 MCF2L2Q86YR7 1114 aa12.13□□□□□ -0.47
CPNE3-212ENST00000621783 KRI1Q8N9T8 703 aaKnown RBP12.13□□□□□ -0.47
CPNE3-212ENST00000621783 CRYGNQ8WXF5 182 aa12.13□□□□□ -0.47
CPNE3-212ENST00000621783 TRERF1Q96PN7 1200 aa12.13□□□□□ -0.47
CPNE3-212ENST00000621783 BTBD7Q9P203 1132 aa12.13□□□□□ -0.47
CPNE3-212ENST00000621783 A0A1W2PQ27 194 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 A0A1W2PQ64 194 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 A0A1W2PQD8 194 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 BTBD19C9JJ37 291 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 PEX10O60683 326 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 CUTAO60888 179 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 CNMDO75829 334 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 LIG1P18858 919 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 PTPREP23469 700 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 ZNF157P51786 506 aaPredicted RBP12.12□□□□□ -0.47
CPNE3-212ENST00000621783 ARHGAP4P98171 946 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 GRIN1Q05586 938 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 TKFCQ3LXA3 575 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 RGMBQ6NW40 437 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 SLC30A10Q6XR72 485 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 ANKRD23Q86SG2 305 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 FCHSD1Q86WN1 690 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 CCAR1Q8IX12 1150 aaKnown RBP12.12□□□□□ -0.47
CPNE3-212ENST00000621783 C4orf32Q8N8J7 132 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 FSIP1Q8NA03 581 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 MRPS27Q92552 414 aaKnown RBP12.12□□□□□ -0.47
CPNE3-212ENST00000621783 PAGR1Q9BTK6 254 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 TMEM60Q9H2L4 133 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 GOLPH3LQ9H4A5 285 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 COL20A1Q9P218 1284 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 PNMA3Q9UL41 463 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 SLC45A1Q9Y2W3 748 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 TLL2Q9Y6L7 1015 aa12.12□□□□□ -0.47
CPNE3-212ENST00000621783 PDHXO00330 501 aa12.11□□□□□ -0.47
CPNE3-212ENST00000621783 SLC37A4O43826 429 aa12.11□□□□□ -0.47
CPNE3-212ENST00000621783 NEMFO60524 1076 aa12.11□□□□□ -0.47
CPNE3-212ENST00000621783 TOMM70O94826 608 aa12.11□□□□□ -0.47
CPNE3-212ENST00000621783 SLC10A3P09131 477 aa12.11□□□□□ -0.47
CPNE3-212ENST00000621783 OR52Z1P0C646 297 aa12.11□□□□□ -0.47
CPNE3-212ENST00000621783 GCFC2P16383 781 aaKnown RBP12.11□□□□□ -0.47
CPNE3-212ENST00000621783 STAT3P40763 770 aa12.11□□□□□ -0.47
CPNE3-212ENST00000621783 CAVIN1Q6NZI2 390 aaKnown RBP12.11□□□□□ -0.47
CPNE3-212ENST00000621783 SHC4Q6S5L8 630 aa12.11□□□□□ -0.47
CPNE3-212ENST00000621783 RIOX2Q8IUF8 465 aa12.11□□□□□ -0.47
CPNE3-212ENST00000621783 SYTL5Q8TDW5 730 aaPredicted RBP12.11□□□□□ -0.47
CPNE3-212ENST00000621783 FERMT2Q96AC1 680 aa12.11□□□□□ -0.47
CPNE3-212ENST00000621783 CLIC6Q96NY7 704 aa12.11□□□□□ -0.47
CPNE3-212ENST00000621783 NAP1L4Q99733 375 aaKnown RBP12.11□□□□□ -0.47
CPNE3-212ENST00000621783 SPATC1LQ9H0A9 340 aa12.11□□□□□ -0.47
CPNE3-212ENST00000621783 ACAD9Q9H845 621 aa12.11□□□□□ -0.47
CPNE3-212ENST00000621783 EHMT1Q9H9B1 1298 aa12.11□□□□□ -0.47
CPNE3-212ENST00000621783 SRPRBQ9Y5M8 271 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms