RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 ZNF658Q5TYW1 1059 aaPredicted RBP7.72□□□□□ -1.17
NEDD9-216ENST00000620854 MCTP2Q6DN12 878 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 MAATS1Q7Z4T9 603 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 NLRP10Q86W26 655 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 CEP57Q86XR8 500 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 NLGN1Q8N2Q7 840 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 SPATA4Q8NEY3 305 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 ISCA1Q9BUE6 129 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 FAM184BQ9ULE4 1060 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 MRC1P22897 1456 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 PSMA7O14818 248 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 RASSF7Q02833 373 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 NNTQ13423 1086 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 SEPT7Q16181 437 aaKnown RBP7.72□□□□□ -1.17
NEDD9-216ENST00000620854 ADGRA1Q86SQ6 560 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 TMTC2Q8N394 836 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 CPVLQ9H3G5 476 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 CD248Q9HCU0 757 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 NLRC4Q9NPP4 1024 aa7.72□□□□□ -1.17
NEDD9-216ENST00000620854 LRRC10BA6NIK2 292 aa7.71□□□□□ -1.17
NEDD9-216ENST00000620854 H0YIN7 160 aa7.71□□□□□ -1.17
NEDD9-216ENST00000620854 H7C1D1 291 aa7.71□□□□□ -1.17
NEDD9-216ENST00000620854 GTPBP6O43824 516 aaPredicted RBP7.71□□□□□ -1.17
NEDD9-216ENST00000620854 FCER1AP12319 257 aa7.71□□□□□ -1.17
NEDD9-216ENST00000620854 AARSP49588 968 aaKnown RBP eCLIP7.71□□□□□ -1.17
NEDD9-216ENST00000620854 CARSP49589 748 aaKnown RBP7.71□□□□□ -1.17
NEDD9-216ENST00000620854 GUCY2DQ02846 1103 aa7.71□□□□□ -1.17
NEDD9-216ENST00000620854 ACTN3Q08043 901 aaPredicted RBP7.71□□□□□ -1.17
NEDD9-216ENST00000620854 DNAAF5Q86Y56 855 aa7.71□□□□□ -1.17
NEDD9-216ENST00000620854 CCDC155Q8N6L0 562 aa7.71□□□□□ -1.17
NEDD9-216ENST00000620854 EPB41L5Q9HCM4 733 aa7.71□□□□□ -1.17
NEDD9-216ENST00000620854 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.71□□□□□ -1.17
NEDD9-216ENST00000620854 GGA1Q9UJY5 639 aa7.71□□□□□ -1.17
NEDD9-216ENST00000620854 STK36Q9NRP7 1315 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 ZC3H4Q9UPT8 1303 aaKnown RBP7.71□□□□□ -1.18
NEDD9-216ENST00000620854 ZNF263O14978 683 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 EIF3HO15372 352 aaKnown RBP eCLIP7.71□□□□□ -1.18
NEDD9-216ENST00000620854 LDHBP07195 334 aaKnown RBP7.71□□□□□ -1.18
NEDD9-216ENST00000620854 FAM153BP0C7A2 387 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 PDE4DQ08499 809 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 FAM153CQ494X1 144 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 MSL1Q68DK7 614 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 C8orf74Q6P047 294 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 RRAGAQ7L523 313 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 OGFOD1Q8N543 542 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 SRBD1Q8N5C6 995 aaKnown RBP7.71□□□□□ -1.18
NEDD9-216ENST00000620854 PHF20Q9BVI0 1012 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 VIPAS39Q9H9C1 493 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 SLC39A2Q9NP94 309 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 FAM153AQ9UHL3 310 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 MAGEB6P1A0A0J9YX57 407 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 LGALS16A8MUM7 142 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 USP17L12C9JPN9 530 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 USP17L21D6R901 530 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 TACC1O75410 805 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 HLA-DOAP06340 250 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 GYG1P46976 350 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 ASIC1P78348 528 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 INF2Q27J81 1249 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 TTMPQ5BVD1 217 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 PAPD7Q5XG87 772 aaKnown RBP7.71□□□□□ -1.18
NEDD9-216ENST00000620854 PDXDC2PQ6P474 469 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 KLHL7Q8IXQ5 586 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 ZIM3Q96PE6 472 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 ZSCAN10Q96SZ4 725 aaPredicted RBP7.71□□□□□ -1.18
NEDD9-216ENST00000620854 RNF26Q9BY78 433 aaPredicted RBP7.71□□□□□ -1.18
NEDD9-216ENST00000620854 RBM12Q9NTZ6 932 aaKnown RBP7.71□□□□□ -1.18
NEDD9-216ENST00000620854 EXOC1Q9NV70 894 aa7.71□□□□□ -1.18
NEDD9-216ENST00000620854 ITIH6Q6UXX5 1313 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 GOLGA6L7A0A1B0GV03 622 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 FRMD3A2A2Y4 597 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 E7EVH7 732 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 EPHB6O15197 1021 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 FTCDO95954 541 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 GNAT2P19087 354 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 EIF4A3P38919 411 aaKnown RBP7.7□□□□□ -1.18
NEDD9-216ENST00000620854 STK4Q13043 487 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 TRIM14Q14142 442 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 CFAP58Q5T655 872 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 KCNV1Q6PIU1 500 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 DYMQ7RTS9 669 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 CCDC91Q7Z6B0 441 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 CREG2Q8IUH2 290 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 ELOA2Q8IYF1 753 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-216ENST00000620854 CAPN11Q9UMQ6 739 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 NFAT5O94916 1531 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 NWD2Q9ULI1 1742 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 SEMA3EO15041 775 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 RPS6KA4O75676 772 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 CSF1RP07333 972 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 CYP19A1P11511 503 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-216ENST00000620854 GFPT1Q06210 699 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-216ENST00000620854 ANKRD40Q6AI12 368 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 DTHD1Q6ZMT9 781 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 KIRREL3Q8IZU9 778 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 MARCH10Q8NA82 808 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-216ENST00000620854 OR2W6PQ8NHA6 318 aa7.7□□□□□ -1.18
NEDD9-216ENST00000620854 CNOT6LQ96LI5 555 aaKnown RBP7.7□□□□□ -1.18
NEDD9-216ENST00000620854 RNPC3Q96LT9 517 aaKnown RBP7.7□□□□□ -1.18
NEDD9-216ENST00000620854 TSG101Q99816 390 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms