RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 ADD1P35611 737 aaKnown RBP21.15■□□□□ 0.98
LITAF-220ENST00000620789 GJA8P48165 433 aa21.15■□□□□ 0.98
LITAF-220ENST00000620789 TRPV1Q8NER1 839 aa21.15■□□□□ 0.98
LITAF-220ENST00000620789 U2AF1L4Q8WU68 220 aaKnown RBP21.15■□□□□ 0.98
LITAF-220ENST00000620789 TBC1D5Q92609 795 aa21.15■□□□□ 0.98
LITAF-220ENST00000620789 PURBQ96QR8 312 aaKnown RBP21.15■□□□□ 0.98
LITAF-220ENST00000620789 ADD3Q9UEY8 706 aaKnown RBP21.15■□□□□ 0.98
LITAF-220ENST00000620789 ASB14A6NK59 587 aa21.14■□□□□ 0.97
LITAF-220ENST00000620789 SGPL1O95470 568 aa21.14■□□□□ 0.97
LITAF-220ENST00000620789 SNAI1O95863 264 aaPredicted RBP21.14■□□□□ 0.97
LITAF-220ENST00000620789 EN2P19622 333 aaPredicted RBP21.14■□□□□ 0.97
LITAF-220ENST00000620789 PRAMEF19Q5SWL8 479 aa21.14■□□□□ 0.97
LITAF-220ENST00000620789 ARMCX2Q7L311 632 aa21.14■□□□□ 0.97
LITAF-220ENST00000620789 ZNF274Q96GC6 653 aaPredicted RBP21.14■□□□□ 0.97
LITAF-220ENST00000620789 C22orf23Q9BZE7 217 aa21.14■□□□□ 0.97
LITAF-220ENST00000620789 CNPY2Q9Y2B0 182 aa21.14■□□□□ 0.97
LITAF-220ENST00000620789 hCG_1642624A0A1W2PR95 340 aa21.13■□□□□ 0.97
LITAF-220ENST00000620789 CNGA1P29973 690 aa21.13■□□□□ 0.97
LITAF-220ENST00000620789 GHRHRQ02643 423 aa21.13■□□□□ 0.97
LITAF-220ENST00000620789 SHISA4Q96DD7 197 aa21.13■□□□□ 0.97
LITAF-220ENST00000620789 LARP6Q9BRS8 491 aaKnown RBP21.13■□□□□ 0.97
LITAF-220ENST00000620789 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.13■□□□□ 0.97
LITAF-220ENST00000620789 LOC102724159A0A0B4J2E5 919 aa21.12■□□□□ 0.97
LITAF-220ENST00000620789 CFBP00751 764 aa21.12■□□□□ 0.97
LITAF-220ENST00000620789 RBM25P49756 843 aaKnown RBP21.12■□□□□ 0.97
LITAF-220ENST00000620789 ALDH5A1P51649 535 aaPredicted RBP21.12■□□□□ 0.97
LITAF-220ENST00000620789 HSD17B4P51659 736 aa21.12■□□□□ 0.97
LITAF-220ENST00000620789 NEK4P51957 841 aa21.12■□□□□ 0.97
LITAF-220ENST00000620789 AK2P54819 239 aa21.12■□□□□ 0.97
LITAF-220ENST00000620789 PWP2Q15269 919 aaKnown RBP21.12■□□□□ 0.97
LITAF-220ENST00000620789 ANKRD1Q15327 319 aa21.12■□□□□ 0.97
LITAF-220ENST00000620789 SAMD3Q8N6K7 520 aa21.12■□□□□ 0.97
LITAF-220ENST00000620789 DNERQ8NFT8 737 aa21.12■□□□□ 0.97
LITAF-220ENST00000620789 SYTL5Q8TDW5 730 aaPredicted RBP21.12■□□□□ 0.97
LITAF-220ENST00000620789 CRISPLD2Q9H0B8 497 aa21.12■□□□□ 0.97
LITAF-220ENST00000620789 UPF2Q9HAU5 1272 aaKnown RBP21.12■□□□□ 0.97
LITAF-220ENST00000620789 MAP3K20Q9NYL2 800 aaKnown RBP21.12■□□□□ 0.97
LITAF-220ENST00000620789 DDX20Q9UHI6 824 aaKnown RBP21.12■□□□□ 0.97
LITAF-220ENST00000620789 MCM3APO60318 1980 aa21.11■□□□□ 0.97
LITAF-220ENST00000620789 SEPT4O43236 478 aa21.11■□□□□ 0.97
LITAF-220ENST00000620789 MSCO60682 206 aa21.11■□□□□ 0.97
LITAF-220ENST00000620789 ZNF865P0CJ78 1059 aaPredicted RBP21.11■□□□□ 0.97
LITAF-220ENST00000620789 CAPN2P17655 700 aa21.11■□□□□ 0.97
LITAF-220ENST00000620789 RGS19P49795 217 aa21.11■□□□□ 0.97
LITAF-220ENST00000620789 CCT2P78371 535 aaKnown RBP21.11■□□□□ 0.97
LITAF-220ENST00000620789 LHX8Q68G74 356 aa21.11■□□□□ 0.97
LITAF-220ENST00000620789 MORC4Q8TE76 937 aa21.11■□□□□ 0.97
LITAF-220ENST00000620789 ABHD16BQ9H3Z7 469 aa21.11■□□□□ 0.97
LITAF-220ENST00000620789 NCOA5Q9HCD5 579 aaKnown RBP21.11■□□□□ 0.97
LITAF-220ENST00000620789 COL20A1Q9P218 1284 aa21.11■□□□□ 0.97
LITAF-220ENST00000620789 V9GY48 417 aaPredicted RBP21.11■□□□□ 0.97
LITAF-220ENST00000620789 LRRC37A2A6NM11 1700 aa21.1■□□□□ 0.97
LITAF-220ENST00000620789 TFRCP02786 760 aaKnown RBP21.1■□□□□ 0.97
LITAF-220ENST00000620789 ACVR2BQ13705 512 aa21.1■□□□□ 0.97
LITAF-220ENST00000620789 NTRK3Q16288 839 aa21.1■□□□□ 0.97
LITAF-220ENST00000620789 KIF2CQ99661 725 aa21.1■□□□□ 0.97
LITAF-220ENST00000620789 ZHX1Q9UKY1 873 aaPredicted RBP21.1■□□□□ 0.97
LITAF-220ENST00000620789 DDX49Q9Y6V7 483 aaKnown RBP21.1■□□□□ 0.97
LITAF-220ENST00000620789 FRMPD3Q5JV73 1810 aa21.1■□□□□ 0.97
LITAF-220ENST00000620789 GCOM1H8Y6P7 765 aaPredicted RBP21.09■□□□□ 0.97
LITAF-220ENST00000620789 POLR2MP0CAP2 368 aa21.09■□□□□ 0.97
LITAF-220ENST00000620789 STK3Q13188 491 aa21.09■□□□□ 0.97
LITAF-220ENST00000620789 HEATR3Q7Z4Q2 680 aa21.09■□□□□ 0.97
LITAF-220ENST00000620789 GPKOWQ92917 476 aaPredicted RBP eCLIP21.09■□□□□ 0.97
LITAF-220ENST00000620789 TAAR1Q96RJ0 339 aa21.09■□□□□ 0.97
LITAF-220ENST00000620789 MPHOSPH6Q99547 160 aaKnown RBP21.09■□□□□ 0.97
LITAF-220ENST00000620789 KATNBL1Q9H079 304 aa21.09■□□□□ 0.97
LITAF-220ENST00000620789 OGDHLQ9ULD0 1010 aa21.09■□□□□ 0.97
LITAF-220ENST00000620789 TPCN1Q9ULQ1 816 aa21.09■□□□□ 0.97
LITAF-220ENST00000620789 hCG_1984214I3L0E3 225 aa21.08■□□□□ 0.97
LITAF-220ENST00000620789 AKR1A1P14550 325 aa21.08■□□□□ 0.97
LITAF-220ENST00000620789 IFNAR1P17181 557 aa21.08■□□□□ 0.97
LITAF-220ENST00000620789 EDNRBP24530 442 aa21.08■□□□□ 0.97
LITAF-220ENST00000620789 HOXA13P31271 388 aaPredicted RBP21.08■□□□□ 0.97
LITAF-220ENST00000620789 WWC2Q6AWC2 1192 aa21.08■□□□□ 0.97
LITAF-220ENST00000620789 ZNF713Q8N859 430 aaPredicted RBP21.08■□□□□ 0.97
LITAF-220ENST00000620789 NSUN6Q8TEA1 469 aaKnown RBP21.08■□□□□ 0.97
LITAF-220ENST00000620789 RMDN3Q96TC7 470 aa21.08■□□□□ 0.97
LITAF-220ENST00000620789 RBM27Q9P2N5 1060 aaKnown RBP21.08■□□□□ 0.97
LITAF-220ENST00000620789 B4DLN1 442 aa21.07■□□□□ 0.96
LITAF-220ENST00000620789 PRPF3O43395 683 aaKnown RBP21.07■□□□□ 0.96
LITAF-220ENST00000620789 MRPL12P52815 198 aaKnown RBP21.07■□□□□ 0.96
LITAF-220ENST00000620789 PHKBQ93100 1093 aa21.07■□□□□ 0.96
LITAF-220ENST00000620789 RNF26Q9BY78 433 aaPredicted RBP21.07■□□□□ 0.96
LITAF-220ENST00000620789 FAM184BQ9ULE4 1060 aa21.07■□□□□ 0.96
LITAF-220ENST00000620789 CPLX1O14810 134 aa21.06■□□□□ 0.96
LITAF-220ENST00000620789 PFKFB2O60825 505 aa21.06■□□□□ 0.96
LITAF-220ENST00000620789 PDE4DQ08499 809 aa21.06■□□□□ 0.96
LITAF-220ENST00000620789 PFKFB3Q16875 520 aaPredicted RBP21.06■□□□□ 0.96
LITAF-220ENST00000620789 ARHGEF16Q5VV41 709 aa21.06■□□□□ 0.96
LITAF-220ENST00000620789 ANO1Q5XXA6 986 aa21.06■□□□□ 0.96
LITAF-220ENST00000620789 PPP1R18Q6NYC8 613 aa21.06■□□□□ 0.96
LITAF-220ENST00000620789 ANKLE1Q8NAG6 615 aa21.06■□□□□ 0.96
LITAF-220ENST00000620789 BACH2Q9BYV9 841 aa21.06■□□□□ 0.96
LITAF-220ENST00000620789 SLKQ9H2G2 1235 aaPredicted RBP21.06■□□□□ 0.96
LITAF-220ENST00000620789 VTA1Q9NP79 307 aa21.06■□□□□ 0.96
LITAF-220ENST00000620789 PXMP2Q9NR77 195 aa21.06■□□□□ 0.96
LITAF-220ENST00000620789 BARHL2Q9NY43 387 aa21.06■□□□□ 0.96
LITAF-220ENST00000620789 PIK3CDO00329 1044 aa21.05■□□□□ 0.96
LITAF-220ENST00000620789 RARBP10826 455 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms