RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 GTF3C2Q8WUA4 911 aaPredicted RBP9.2□□□□□ -0.94
CPNE3-209ENST00000620393 CLEC4DQ8WXI8 215 aa9.2□□□□□ -0.94
CPNE3-209ENST00000620393 CUL5Q93034 780 aa9.2□□□□□ -0.94
CPNE3-209ENST00000620393 TNFRSF25Q93038 417 aa9.2□□□□□ -0.94
CPNE3-209ENST00000620393 ZCCHC17Q9NP64 241 aaKnown RBP9.2□□□□□ -0.94
CPNE3-209ENST00000620393 RBPJLQ9UBG7 517 aa9.2□□□□□ -0.94
CPNE3-209ENST00000620393 ZNF214Q9UL59 606 aaPredicted RBP9.2□□□□□ -0.94
CPNE3-209ENST00000620393 PCDHA6Q9UN73 950 aa9.2□□□□□ -0.94
CPNE3-209ENST00000620393 BOLA1Q9Y3E2 137 aa9.2□□□□□ -0.94
CPNE3-209ENST00000620393 RABGAP1Q9Y3P9 1069 aa9.2□□□□□ -0.94
CPNE3-209ENST00000620393 PCDHA8Q9Y5H6 950 aa9.2□□□□□ -0.94
CPNE3-209ENST00000620393 MYH8P13535 1937 aa9.2□□□□□ -0.94
CPNE3-209ENST00000620393 PIK3CDO00329 1044 aa9.19□□□□□ -0.94
CPNE3-209ENST00000620393 MEIS2O14770 477 aa9.19□□□□□ -0.94
CPNE3-209ENST00000620393 OPLAHO14841 1288 aa9.19□□□□□ -0.94
CPNE3-209ENST00000620393 CNMDO75829 334 aa9.19□□□□□ -0.94
CPNE3-209ENST00000620393 CYP2C8P10632 490 aa9.19□□□□□ -0.94
CPNE3-209ENST00000620393 ALAS1P13196 640 aa9.19□□□□□ -0.94
CPNE3-209ENST00000620393 GCLCP48506 637 aaPredicted RBP9.19□□□□□ -0.94
CPNE3-209ENST00000620393 Q3C1V9 767 aa9.19□□□□□ -0.94
CPNE3-209ENST00000620393 ATL3Q6DD88 541 aa9.19□□□□□ -0.94
CPNE3-209ENST00000620393 MCTP2Q6DN12 878 aa9.19□□□□□ -0.94
CPNE3-209ENST00000620393 CYP4F22Q6NT55 531 aa9.19□□□□□ -0.94
CPNE3-209ENST00000620393 FAM173BQ6P4H8 233 aa9.19□□□□□ -0.94
CPNE3-209ENST00000620393 MCF2L2Q86YR7 1114 aa9.19□□□□□ -0.94
CPNE3-209ENST00000620393 RIOX2Q8IUF8 465 aa9.19□□□□□ -0.94
CPNE3-209ENST00000620393 TBC1D5Q92609 795 aa9.19□□□□□ -0.94
CPNE3-209ENST00000620393 TRERF1Q96PN7 1200 aa9.19□□□□□ -0.94
CPNE3-209ENST00000620393 TEX13BQ9BXU2 312 aa9.19□□□□□ -0.94
CPNE3-209ENST00000620393 MAF1Q9H063 256 aa9.19□□□□□ -0.94
CPNE3-209ENST00000620393 BTBD7Q9P203 1132 aa9.19□□□□□ -0.94
CPNE3-209ENST00000620393 BIN2Q9UBW5 565 aaPredicted RBP9.19□□□□□ -0.94
CPNE3-209ENST00000620393 RIPK3Q9Y572 518 aa9.19□□□□□ -0.94
CPNE3-209ENST00000620393 CCDC194A0A1B0GVG4 234 aa9.18□□□□□ -0.94
CPNE3-209ENST00000620393 GCOM1H8Y6P7 765 aaPredicted RBP9.18□□□□□ -0.94
CPNE3-209ENST00000620393 IGF2BP3O00425 579 aaKnown RBP eCLIP9.18□□□□□ -0.94
CPNE3-209ENST00000620393 BAG4O95429 457 aaKnown RBP9.18□□□□□ -0.94
CPNE3-209ENST00000620393 SLC25A27O95847 323 aa9.18□□□□□ -0.94
CPNE3-209ENST00000620393 FOSP01100 380 aaPredicted RBP9.18□□□□□ -0.94
CPNE3-209ENST00000620393 POLR2MP0CAP2 368 aa9.18□□□□□ -0.94
CPNE3-209ENST00000620393 TAL1P17542 331 aaPredicted RBP9.18□□□□□ -0.94
CPNE3-209ENST00000620393 CLK2P49760 499 aaKnown RBP9.18□□□□□ -0.94
CPNE3-209ENST00000620393 GHRHRQ02643 423 aa9.18□□□□□ -0.94
CPNE3-209ENST00000620393 DNM1Q05193 864 aaKnown RBP9.18□□□□□ -0.94
CPNE3-209ENST00000620393 SREBF2Q12772 1141 aa9.18□□□□□ -0.94
CPNE3-209ENST00000620393 NOGQ13253 232 aa9.18□□□□□ -0.94
CPNE3-209ENST00000620393 PLS1Q14651 629 aa9.18□□□□□ -0.94
CPNE3-209ENST00000620393 FOXD4L6Q3SYB3 417 aaPredicted RBP9.18□□□□□ -0.94
CPNE3-209ENST00000620393 EARS2Q5JPH6 523 aaKnown RBP9.18□□□□□ -0.94
CPNE3-209ENST00000620393 MYSM1Q5VVJ2 828 aa9.18□□□□□ -0.94
CPNE3-209ENST00000620393 JAKMIP3Q5VZ66 844 aa9.18□□□□□ -0.94
CPNE3-209ENST00000620393 SNRNP48Q6IEG0 339 aaKnown RBP9.18□□□□□ -0.94
CPNE3-209ENST00000620393 USP17L6PQ6QN14 398 aa9.18□□□□□ -0.94
CPNE3-209ENST00000620393 FOXD4L3Q6VB84 417 aaPredicted RBP9.18□□□□□ -0.94
CPNE3-209ENST00000620393 PAXIP1Q6ZW49 1069 aaPredicted RBP9.18□□□□□ -0.94
CPNE3-209ENST00000620393 KRT25Q7Z3Z0 450 aa9.18□□□□□ -0.94
CPNE3-209ENST00000620393 REXO1Q8N1G1 1221 aaKnown RBP9.18□□□□□ -0.94
CPNE3-209ENST00000620393 CHST13Q8NET6 341 aa9.18□□□□□ -0.94
CPNE3-209ENST00000620393 RASGRP4Q8TDF6 673 aa9.18□□□□□ -0.94
CPNE3-209ENST00000620393 CAPNS2Q96L46 248 aa9.18□□□□□ -0.94
CPNE3-209ENST00000620393 ZNF396Q96N95 335 aaPredicted RBP9.18□□□□□ -0.94
CPNE3-209ENST00000620393 ZIC5Q96T25 663 aa9.18□□□□□ -0.94
CPNE3-209ENST00000620393 PARK7Q99497 189 aaKnown RBP9.18□□□□□ -0.94
CPNE3-209ENST00000620393 SPATC1LQ9H0A9 340 aa9.18□□□□□ -0.94
CPNE3-209ENST00000620393 TXNRD2Q9NNW7 524 aa9.18□□□□□ -0.94
CPNE3-209ENST00000620393 MAP3K20Q9NYL2 800 aaKnown RBP9.18□□□□□ -0.94
CPNE3-209ENST00000620393 TFIP11Q9UBB9 837 aaKnown RBP9.18□□□□□ -0.94
CPNE3-209ENST00000620393 BAZ2BQ9UIF8 2168 aaKnown RBP9.18□□□□□ -0.94
CPNE3-209ENST00000620393 MYH4Q9Y623 1939 aa9.17□□□□□ -0.94
CPNE3-209ENST00000620393 NFIBO00712 420 aa9.17□□□□□ -0.94
CPNE3-209ENST00000620393 PEX10O60683 326 aa9.17□□□□□ -0.94
CPNE3-209ENST00000620393 CFBP00751 764 aa9.17□□□□□ -0.94
CPNE3-209ENST00000620393 COPB2P35606 906 aa9.17□□□□□ -0.94
CPNE3-209ENST00000620393 TRAPPC10P48553 1259 aa9.17□□□□□ -0.94
CPNE3-209ENST00000620393 TOB1P50616 345 aaPredicted RBP9.17□□□□□ -0.94
CPNE3-209ENST00000620393 MMRN1Q13201 1228 aa9.17□□□□□ -0.94
CPNE3-209ENST00000620393 AP3B2Q13367 1082 aa9.17□□□□□ -0.94
CPNE3-209ENST00000620393 UBE2SQ16763 222 aa9.17□□□□□ -0.94
CPNE3-209ENST00000620393 NOM1Q5C9Z4 860 aaKnown RBP9.17□□□□□ -0.94
CPNE3-209ENST00000620393 RILPL1Q5EBL4 403 aa9.17□□□□□ -0.94
CPNE3-209ENST00000620393 MUM1L1Q5H9M0 696 aa9.17□□□□□ -0.94
CPNE3-209ENST00000620393 PIK3AP1Q6ZUJ8 805 aa9.17□□□□□ -0.94
CPNE3-209ENST00000620393 GPRC5AQ8NFJ5 357 aa9.17□□□□□ -0.94
CPNE3-209ENST00000620393 SMCR8Q8TEV9 937 aaPredicted RBP9.17□□□□□ -0.94
CPNE3-209ENST00000620393 GBP4Q96PP9 640 aa9.17□□□□□ -0.94
CPNE3-209ENST00000620393 PAGR1Q9BTK6 254 aa9.17□□□□□ -0.94
CPNE3-209ENST00000620393 MOV10L1Q9BXT6 1211 aaKnown RBP9.17□□□□□ -0.94
CPNE3-209ENST00000620393 RNF146Q9NTX7 359 aa9.17□□□□□ -0.94
CPNE3-209ENST00000620393 TMEM260Q9NX78 707 aa9.17□□□□□ -0.94
CPNE3-209ENST00000620393 MORF4L1Q9UBU8 362 aa9.17□□□□□ -0.94
CPNE3-209ENST00000620393 FBXO40Q9UH90 709 aa9.17□□□□□ -0.94
CPNE3-209ENST00000620393 CFAP45Q9UL16 551 aa9.17□□□□□ -0.94
CPNE3-209ENST00000620393 PHIPQ8WWQ0 1821 aa9.17□□□□□ -0.94
CPNE3-209ENST00000620393 FAM205CA6NFA0 338 aa9.16□□□□□ -0.94
CPNE3-209ENST00000620393 EDIL3O43854 480 aa9.16□□□□□ -0.94
CPNE3-209ENST00000620393 ALDH1A1P00352 501 aa9.16□□□□□ -0.94
CPNE3-209ENST00000620393 HOXA13P31271 388 aaPredicted RBP9.16□□□□□ -0.94
CPNE3-209ENST00000620393 MAP2K2P36507 400 aa9.16□□□□□ -0.94
CPNE3-209ENST00000620393 HSD17B4P51659 736 aa9.16□□□□□ -0.94
CPNE3-209ENST00000620393 ERVK-9P63128 1117 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms