RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 FRMPD3Q5JV73 1810 aa18.06■□□□□ 0.48
RPP40-207ENST00000618533 PPP1R11O60927 126 aaPredicted RBP18.05■□□□□ 0.48
RPP40-207ENST00000618533 SGPL1O95470 568 aa18.05■□□□□ 0.48
RPP40-207ENST00000618533 TAL1P17542 331 aaPredicted RBP18.05■□□□□ 0.48
RPP40-207ENST00000618533 CNTN2Q02246 1040 aa18.05■□□□□ 0.48
RPP40-207ENST00000618533 RAB11FIP4Q86YS3 637 aa18.05■□□□□ 0.48
RPP40-207ENST00000618533 TEX2Q8IWB9 1127 aa18.05■□□□□ 0.48
RPP40-207ENST00000618533 IL27Q8NEV9 243 aa18.05■□□□□ 0.48
RPP40-207ENST00000618533 U2AF1L4Q8WU68 220 aaKnown RBP18.05■□□□□ 0.48
RPP40-207ENST00000618533 DEFB118Q96PH6 123 aa18.05■□□□□ 0.48
RPP40-207ENST00000618533 CRISPLD2Q9H0B8 497 aa18.05■□□□□ 0.48
RPP40-207ENST00000618533 ABHD16BQ9H3Z7 469 aa18.05■□□□□ 0.48
RPP40-207ENST00000618533 CNTNAP5Q8WYK1 1306 aa18.04■□□□□ 0.48
RPP40-207ENST00000618533 POTEFA5A3E0 1075 aa18.04■□□□□ 0.48
RPP40-207ENST00000618533 SOWAHBA6NEL2 793 aa18.04■□□□□ 0.48
RPP40-207ENST00000618533 hCG_1984214I3L0E3 225 aa18.04■□□□□ 0.48
RPP40-207ENST00000618533 SEPT4O43236 478 aa18.04■□□□□ 0.48
RPP40-207ENST00000618533 ARMCX2Q7L311 632 aa18.04■□□□□ 0.48
RPP40-207ENST00000618533 ZNF713Q8N859 430 aaPredicted RBP18.04■□□□□ 0.48
RPP40-207ENST00000618533 MORC4Q8TE76 937 aa18.04■□□□□ 0.48
RPP40-207ENST00000618533 FAM217BQ9NTX9 383 aaPredicted RBP18.04■□□□□ 0.48
RPP40-207ENST00000618533 CALML3P27482 149 aa18.03■□□□□ 0.48
RPP40-207ENST00000618533 PDIA3P30101 505 aaKnown RBP18.03■□□□□ 0.48
RPP40-207ENST00000618533 CCND3P30281 292 aaPredicted RBP18.03■□□□□ 0.48
RPP40-207ENST00000618533 RBM25P49756 843 aaKnown RBP18.03■□□□□ 0.48
RPP40-207ENST00000618533 ALDH5A1P51649 535 aaPredicted RBP18.03■□□□□ 0.48
RPP40-207ENST00000618533 HSD17B4P51659 736 aa18.03■□□□□ 0.48
RPP40-207ENST00000618533 FUT2Q10981 343 aa18.03■□□□□ 0.48
RPP40-207ENST00000618533 SLC30A10Q6XR72 485 aa18.03■□□□□ 0.48
RPP40-207ENST00000618533 ANKLE1Q8NAG6 615 aa18.03■□□□□ 0.48
RPP40-207ENST00000618533 C22orf23Q9BZE7 217 aa18.03■□□□□ 0.48
RPP40-207ENST00000618533 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.03■□□□□ 0.48
RPP40-207ENST00000618533 DDX20Q9UHI6 824 aaKnown RBP18.03■□□□□ 0.48
RPP40-207ENST00000618533 LRRC37A2A6NM11 1700 aa18.03■□□□□ 0.48
RPP40-207ENST00000618533 SNAI1O95863 264 aaPredicted RBP18.02■□□□□ 0.48
RPP40-207ENST00000618533 CNGA1P29973 690 aa18.02■□□□□ 0.48
RPP40-207ENST00000618533 CDC27P30260 824 aa18.02■□□□□ 0.48
RPP40-207ENST00000618533 CMTR1Q8N1G2 835 aaKnown RBP18.02■□□□□ 0.48
RPP40-207ENST00000618533 TRPV1Q8NER1 839 aa18.02■□□□□ 0.48
RPP40-207ENST00000618533 SYTL5Q8TDW5 730 aaPredicted RBP18.02■□□□□ 0.48
RPP40-207ENST00000618533 OGDHLQ9ULD0 1010 aa18.02■□□□□ 0.48
RPP40-207ENST00000618533 GCOM1H8Y6P7 765 aaPredicted RBP18.01■□□□□ 0.47
RPP40-207ENST00000618533 OPLAHO14841 1288 aa18.01■□□□□ 0.47
RPP40-207ENST00000618533 CFBP00751 764 aa18.01■□□□□ 0.47
RPP40-207ENST00000618533 POLR2MP0CAP2 368 aa18.01■□□□□ 0.47
RPP40-207ENST00000618533 ZNF865P0CJ78 1059 aaPredicted RBP18.01■□□□□ 0.47
RPP40-207ENST00000618533 AKR1A1P14550 325 aa18.01■□□□□ 0.47
RPP40-207ENST00000618533 ADD1P35611 737 aaKnown RBP18.01■□□□□ 0.47
RPP40-207ENST00000618533 ACVR2BQ13705 512 aa18.01■□□□□ 0.47
RPP40-207ENST00000618533 PPP1R18Q6NYC8 613 aa18.01■□□□□ 0.47
RPP40-207ENST00000618533 CPLX2Q6PUV4 134 aaKnown RBP18.01■□□□□ 0.47
RPP40-207ENST00000618533 CCDC82Q8N4S0 544 aa18.01■□□□□ 0.47
RPP40-207ENST00000618533 NSUN6Q8TEA1 469 aaKnown RBP18.01■□□□□ 0.47
RPP40-207ENST00000618533 PIBF1Q8WXW3 757 aa18.01■□□□□ 0.47
RPP40-207ENST00000618533 SHISA4Q96DD7 197 aa18.01■□□□□ 0.47
RPP40-207ENST00000618533 IWS1Q96ST2 819 aa18.01■□□□□ 0.47
RPP40-207ENST00000618533 VTA1Q9NP79 307 aa18.01■□□□□ 0.47
RPP40-207ENST00000618533 ASTN1O14525 1302 aa18■□□□□ 0.47
RPP40-207ENST00000618533 PIK3CDO00329 1044 aa18■□□□□ 0.47
RPP40-207ENST00000618533 TFRCP02786 760 aaKnown RBP18■□□□□ 0.47
RPP40-207ENST00000618533 IFNAR1P17181 557 aa18■□□□□ 0.47
RPP40-207ENST00000618533 EN2P19622 333 aaPredicted RBP18■□□□□ 0.47
RPP40-207ENST00000618533 EDNRBP24530 442 aa18■□□□□ 0.47
RPP40-207ENST00000618533 NEK4P51957 841 aa18■□□□□ 0.47
RPP40-207ENST00000618533 LHX8Q68G74 356 aa18■□□□□ 0.47
RPP40-207ENST00000618533 CUL5Q93034 780 aa18■□□□□ 0.47
RPP40-207ENST00000618533 RNF26Q9BY78 433 aaPredicted RBP18■□□□□ 0.47
RPP40-207ENST00000618533 FAM184BQ9ULE4 1060 aa18■□□□□ 0.47
RPP40-207ENST00000618533 PRPF3O43395 683 aaKnown RBP17.99■□□□□ 0.47
RPP40-207ENST00000618533 AK2P54819 239 aa17.99■□□□□ 0.47
RPP40-207ENST00000618533 AKAP17AQ02040 695 aaKnown RBP17.99■□□□□ 0.47
RPP40-207ENST00000618533 PRAMEF19Q5SWL8 479 aa17.99■□□□□ 0.47
RPP40-207ENST00000618533 TBC1D5Q92609 795 aa17.99■□□□□ 0.47
RPP40-207ENST00000618533 KATNBL1Q9H079 304 aa17.99■□□□□ 0.47
RPP40-207ENST00000618533 GLT8D2Q9H1C3 349 aa17.99■□□□□ 0.47
RPP40-207ENST00000618533 ZHX1Q9UKY1 873 aaPredicted RBP17.99■□□□□ 0.47
RPP40-207ENST00000618533 V9GY48 417 aaPredicted RBP17.99■□□□□ 0.47
RPP40-207ENST00000618533 CPLX1O14810 134 aa17.98■□□□□ 0.47
RPP40-207ENST00000618533 RARBP10826 455 aa17.98■□□□□ 0.47
RPP40-207ENST00000618533 PDE4DQ08499 809 aa17.98■□□□□ 0.47
RPP40-207ENST00000618533 NTRK3Q16288 839 aa17.98■□□□□ 0.47
RPP40-207ENST00000618533 PFKFB3Q16875 520 aaPredicted RBP17.98■□□□□ 0.47
RPP40-207ENST00000618533 HEATR3Q7Z4Q2 680 aa17.98■□□□□ 0.47
RPP40-207ENST00000618533 TRIM22Q8IYM9 498 aa17.98■□□□□ 0.47
RPP40-207ENST00000618533 CCDC12Q8WUD4 166 aaPredicted RBP17.98■□□□□ 0.47
RPP40-207ENST00000618533 RMDN3Q96TC7 470 aa17.98■□□□□ 0.47
RPP40-207ENST00000618533 SLKQ9H2G2 1235 aaPredicted RBP17.98■□□□□ 0.47
RPP40-207ENST00000618533 KIAA1217Q5T5P2 1943 aa17.98■□□□□ 0.47
RPP40-207ENST00000618533 PFKFB2O60825 505 aa17.97■□□□□ 0.47
RPP40-207ENST00000618533 CDKL5O76039 1030 aa17.97■□□□□ 0.47
RPP40-207ENST00000618533 SCG2P13521 617 aa17.97■□□□□ 0.47
RPP40-207ENST00000618533 CCT2P78371 535 aaKnown RBP17.97■□□□□ 0.47
RPP40-207ENST00000618533 ARHGEF16Q5VV41 709 aa17.97■□□□□ 0.47
RPP40-207ENST00000618533 ARRDC4Q8NCT1 418 aa17.97■□□□□ 0.47
RPP40-207ENST00000618533 PURBQ96QR8 312 aaKnown RBP17.97■□□□□ 0.47
RPP40-207ENST00000618533 TAAR1Q96RJ0 339 aa17.97■□□□□ 0.47
RPP40-207ENST00000618533 PSTPIP2Q9H939 334 aa17.97■□□□□ 0.47
RPP40-207ENST00000618533 PXMP2Q9NR77 195 aa17.97■□□□□ 0.47
RPP40-207ENST00000618533 BARHL2Q9NY43 387 aa17.97■□□□□ 0.47
RPP40-207ENST00000618533 COL20A1Q9P218 1284 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms