RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 CCT8L1PA6NM43 557 aa13.49□□□□□ -0.25
MATR3-227ENST00000618441 MGRN1O60291 552 aa13.49□□□□□ -0.25
MATR3-227ENST00000618441 MYL1P05976 194 aa13.49□□□□□ -0.25
MATR3-227ENST00000618441 ALDH5A1P51649 535 aaPredicted RBP13.49□□□□□ -0.25
MATR3-227ENST00000618441 KRT31Q15323 416 aa13.49□□□□□ -0.25
MATR3-227ENST00000618441 SAFBQ15424 915 aaKnown RBP eCLIP13.49□□□□□ -0.25
MATR3-227ENST00000618441 MUM1Q2TAK8 710 aa13.49□□□□□ -0.25
MATR3-227ENST00000618441 SPATA1Q5VX52 437 aa13.49□□□□□ -0.25
MATR3-227ENST00000618441 TBC1D5Q92609 795 aa13.49□□□□□ -0.25
MATR3-227ENST00000618441 ACSBG1Q96GR2 724 aa13.49□□□□□ -0.25
MATR3-227ENST00000618441 ERFP50548 548 aa13.49□□□□□ -0.25
MATR3-227ENST00000618441 RAD23BP54727 409 aa13.49□□□□□ -0.25
MATR3-227ENST00000618441 MCMDC2Q4G0Z9 681 aa13.49□□□□□ -0.25
MATR3-227ENST00000618441 DDX42Q86XP3 938 aaKnown RBP eCLIP13.49□□□□□ -0.25
MATR3-227ENST00000618441 YIPF2Q9BWQ6 316 aa13.49□□□□□ -0.25
MATR3-227ENST00000618441 TSPYL2Q9H2G4 693 aaPredicted RBP13.49□□□□□ -0.25
MATR3-227ENST00000618441 E7EWF7 191 aa13.49□□□□□ -0.25
MATR3-227ENST00000618441 GLI1P08151 1106 aa13.49□□□□□ -0.25
MATR3-227ENST00000618441 TYW1BQ6NUM6 668 aa13.49□□□□□ -0.25
MATR3-227ENST00000618441 GBP5Q96PP8 586 aa13.49□□□□□ -0.25
MATR3-227ENST00000618441 MLXIPLQ9NP71 852 aa13.49□□□□□ -0.25
MATR3-227ENST00000618441 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.49□□□□□ -0.25
MATR3-227ENST00000618441 ADGRB2O60241 1585 aa13.49□□□□□ -0.25
MATR3-227ENST00000618441 HMGB1P1B2RPK0 211 aaPredicted RBP13.48□□□□□ -0.25
MATR3-227ENST00000618441 PARP1P09874 1014 aaKnown RBP13.48□□□□□ -0.25
MATR3-227ENST00000618441 TTF1Q15361 905 aaPredicted RBP13.48□□□□□ -0.25
MATR3-227ENST00000618441 CNBD1Q8NA66 436 aa13.48□□□□□ -0.25
MATR3-227ENST00000618441 ECT2Q9H8V3 914 aa13.48□□□□□ -0.25
MATR3-227ENST00000618441 ZC3H13Q5T200 1668 aaKnown RBP13.48□□□□□ -0.25
MATR3-227ENST00000618441 NUTM2BA6NNL0 878 aaPredicted RBP13.48□□□□□ -0.25
MATR3-227ENST00000618441 NUTM2EB1AL46 878 aaPredicted RBP13.48□□□□□ -0.25
MATR3-227ENST00000618441 PRC1O43663 620 aa13.48□□□□□ -0.25
MATR3-227ENST00000618441 ALDH1L1O75891 902 aa13.48□□□□□ -0.25
MATR3-227ENST00000618441 XRCC4Q13426 336 aa13.48□□□□□ -0.25
MATR3-227ENST00000618441 C1orf141Q5JVX7 400 aa13.48□□□□□ -0.25
MATR3-227ENST00000618441 CHPF2Q9P2E5 772 aa13.48□□□□□ -0.25
MATR3-227ENST00000618441 MAGEC2Q9UBF1 373 aaPredicted RBP13.48□□□□□ -0.25
MATR3-227ENST00000618441 ADD3Q9UEY8 706 aaKnown RBP13.48□□□□□ -0.25
MATR3-227ENST00000618441 TRIM33Q9UPN9 1127 aa13.48□□□□□ -0.25
MATR3-227ENST00000618441 UNCXA6NJT0 531 aa13.48□□□□□ -0.25
MATR3-227ENST00000618441 BLMHQ13867 455 aa13.48□□□□□ -0.25
MATR3-227ENST00000618441 SLC26A6Q9BXS9 759 aa13.48□□□□□ -0.25
MATR3-227ENST00000618441 UBE2OQ9C0C9 1292 aaKnown RBP13.48□□□□□ -0.25
MATR3-227ENST00000618441 PRDM11Q9NQV5 511 aa13.48□□□□□ -0.25
MATR3-227ENST00000618441 KCNJ14Q9UNX9 436 aa13.48□□□□□ -0.25
MATR3-227ENST00000618441 BZW2Q9Y6E2 419 aaKnown RBP13.48□□□□□ -0.25
MATR3-227ENST00000618441 USP6P35125 1406 aa13.48□□□□□ -0.25
MATR3-227ENST00000618441 MAP3K13O43283 966 aa13.48□□□□□ -0.25
MATR3-227ENST00000618441 KCNQ3O43525 872 aa13.48□□□□□ -0.25
MATR3-227ENST00000618441 COQ9O75208 318 aa13.48□□□□□ -0.25
MATR3-227ENST00000618441 ZNF18P17022 549 aa13.48□□□□□ -0.25
MATR3-227ENST00000618441 TUBP50607 506 aa13.48□□□□□ -0.25
MATR3-227ENST00000618441 COPB1P53618 953 aaKnown RBP13.48□□□□□ -0.25
MATR3-227ENST00000618441 TDRD12Q587J7 1177 aaKnown RBP13.48□□□□□ -0.25
MATR3-227ENST00000618441 SOGA3Q5TF21 947 aa13.48□□□□□ -0.25
MATR3-227ENST00000618441 DNAAF2Q9NVR5 837 aaKnown RBP13.48□□□□□ -0.25
MATR3-227ENST00000618441 VPS54Q9P1Q0 977 aa13.48□□□□□ -0.25
MATR3-227ENST00000618441 RCCD1A6NED2 376 aa13.47□□□□□ -0.25
MATR3-227ENST00000618441 SERPINB4P48594 390 aa13.47□□□□□ -0.25
MATR3-227ENST00000618441 NUGGCQ68CJ6 796 aa13.47□□□□□ -0.25
MATR3-227ENST00000618441 ANKRD23Q86SG2 305 aa13.47□□□□□ -0.25
MATR3-227ENST00000618441 DDX27Q96GQ7 796 aaKnown RBP13.47□□□□□ -0.25
MATR3-227ENST00000618441 SNRKQ9NRH2 765 aa13.47□□□□□ -0.25
MATR3-227ENST00000618441 PACSIN2Q9UNF0 486 aaPredicted RBP13.47□□□□□ -0.25
MATR3-227ENST00000618441 AXIN2Q9Y2T1 843 aa13.47□□□□□ -0.25
MATR3-227ENST00000618441 REXO2Q9Y3B8 237 aaKnown RBP13.47□□□□□ -0.25
MATR3-227ENST00000618441 NEDD4P46934 1319 aa13.47□□□□□ -0.25
MATR3-227ENST00000618441 PSMD14O00487 310 aa13.47□□□□□ -0.25
MATR3-227ENST00000618441 CCDC57Q2TAC2 916 aa13.47□□□□□ -0.25
MATR3-227ENST00000618441 CHADLQ6NUI6 762 aa13.47□□□□□ -0.25
MATR3-227ENST00000618441 HOOK3Q86VS8 718 aa13.47□□□□□ -0.25
MATR3-227ENST00000618441 RNF10Q8N5U6 811 aaKnown RBP13.47□□□□□ -0.25
MATR3-227ENST00000618441 MAIP1Q8WWC4 291 aa13.47□□□□□ -0.25
MATR3-227ENST00000618441 CCDC51Q96ER9 411 aa13.47□□□□□ -0.25
MATR3-227ENST00000618441 GALNT8Q9NY28 637 aa13.47□□□□□ -0.25
MATR3-227ENST00000618441 TMEM94Q12767 1356 aa13.47□□□□□ -0.25
MATR3-227ENST00000618441 UBE2Q2LH0YL09 131 aa13.47□□□□□ -0.25
MATR3-227ENST00000618441 GALNT17Q6IS24 598 aa13.47□□□□□ -0.25
MATR3-227ENST00000618441 CCHCR1Q8TD31 782 aa13.47□□□□□ -0.25
MATR3-227ENST00000618441 RAPGEF4Q8WZA2 1011 aa13.47□□□□□ -0.25
MATR3-227ENST00000618441 VCXQ9H320 206 aa13.47□□□□□ -0.25
MATR3-227ENST00000618441 DDX21Q9NR30 783 aaKnown RBP eCLIP13.47□□□□□ -0.25
MATR3-227ENST00000618441 UBOX5O94941 541 aa13.46□□□□□ -0.25
MATR3-227ENST00000618441 CD44P16070 742 aaKnown RBP13.46□□□□□ -0.25
MATR3-227ENST00000618441 EVA1CP58658 441 aa13.46□□□□□ -0.25
MATR3-227ENST00000618441 HERVK_113P62684 666 aa13.46□□□□□ -0.25
MATR3-227ENST00000618441 ZBED6P86452 979 aa13.46□□□□□ -0.25
MATR3-227ENST00000618441 RNASELQ05823 741 aaKnown RBP13.46□□□□□ -0.25
MATR3-227ENST00000618441 RNF168Q8IYW5 571 aaPredicted RBP13.46□□□□□ -0.25
MATR3-227ENST00000618441 DPH5Q9H2P9 285 aa13.46□□□□□ -0.25
MATR3-227ENST00000618441 TAF1DQ9H5J8 278 aaPredicted RBP13.46□□□□□ -0.25
MATR3-227ENST00000618441 EBF2Q9HAK2 575 aa13.46□□□□□ -0.25
MATR3-227ENST00000618441 SEC31BQ9NQW1 1179 aa13.46□□□□□ -0.25
MATR3-227ENST00000618441 ABCF3Q9NUQ8 709 aa13.46□□□□□ -0.25
MATR3-227ENST00000618441 DCDC2CA8MYV0 355 aa13.46□□□□□ -0.25
MATR3-227ENST00000618441 PPP2R2AP63151 447 aa13.46□□□□□ -0.25
MATR3-227ENST00000618441 FKBP4Q02790 459 aaKnown RBP eCLIP13.46□□□□□ -0.258e-7■■■□□ 16.6
MATR3-227ENST00000618441 HAUS3Q68CZ6 603 aa13.46□□□□□ -0.25
MATR3-227ENST00000618441 C6orf89Q6UWU4 347 aa13.46□□□□□ -0.25
MATR3-227ENST00000618441 ELOA2Q8IYF1 753 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms