RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 EDIL3O43854 480 aa13.39□□□□□ -0.27
PDPN-211ENST00000617617 PTPREP23469 700 aa13.39□□□□□ -0.27
PDPN-211ENST00000617617 CIITAP33076 1130 aa13.39□□□□□ -0.27
PDPN-211ENST00000617617 SREBF1P36956 1147 aa13.39□□□□□ -0.27
PDPN-211ENST00000617617 NOM1Q5C9Z4 860 aaKnown RBP13.39□□□□□ -0.27
PDPN-211ENST00000617617 ANP32EQ9BTT0 268 aa13.39□□□□□ -0.27
PDPN-211ENST00000617617 GPBP1L1Q9HC44 474 aaPredicted RBP13.39□□□□□ -0.27
PDPN-211ENST00000617617 PLXNA1Q9UIW2 1896 aa13.38□□□□□ -0.27
PDPN-211ENST00000617617 LOXHD1Q8IVV2 1947 aa13.38□□□□□ -0.27
PDPN-211ENST00000617617 OSBPP22059 807 aa13.38□□□□□ -0.27
PDPN-211ENST00000617617 FSTL1Q12841 308 aa13.38□□□□□ -0.27
PDPN-211ENST00000617617 FTOQ9C0B1 505 aaKnown RBP eCLIP13.38□□□□□ -0.27
PDPN-211ENST00000617617 FBXO2Q9UK22 296 aaPredicted RBP13.38□□□□□ -0.27
PDPN-211ENST00000617617 PNMA3Q9UL41 463 aa13.38□□□□□ -0.27
PDPN-211ENST00000617617 PCDHA7Q9UN72 937 aa13.38□□□□□ -0.27
PDPN-211ENST00000617617 TLL2Q9Y6L7 1015 aa13.38□□□□□ -0.27
PDPN-211ENST00000617617 THSD7BQ9C0I4 1608 aa13.38□□□□□ -0.27
PDPN-211ENST00000617617 GCOM1H8Y6P7 765 aaPredicted RBP13.38□□□□□ -0.27
PDPN-211ENST00000617617 GADD45BO75293 160 aaPredicted RBP13.38□□□□□ -0.27
PDPN-211ENST00000617617 POLR2MP0CAP2 368 aa13.38□□□□□ -0.27
PDPN-211ENST00000617617 SNAP25P60880 206 aa13.38□□□□□ -0.27
PDPN-211ENST00000617617 FMR1Q06787 632 aaKnown RBP eCLIP13.38□□□□□ -0.27
PDPN-211ENST00000617617 CCDC174Q6PII3 467 aa13.38□□□□□ -0.27
PDPN-211ENST00000617617 TEX13BQ9BXU2 312 aa13.38□□□□□ -0.27
PDPN-211ENST00000617617 EHMT1Q9H9B1 1298 aa13.38□□□□□ -0.27
PDPN-211ENST00000617617 GDPD2Q9HCC8 539 aa13.38□□□□□ -0.27
PDPN-211ENST00000617617 BIN2Q9UBW5 565 aaPredicted RBP13.38□□□□□ -0.27
PDPN-211ENST00000617617 KIAA1217Q5T5P2 1943 aa13.38□□□□□ -0.27
PDPN-211ENST00000617617 CMA1P23946 247 aa13.37□□□□□ -0.27
PDPN-211ENST00000617617 TMEM132BQ14DG7 1078 aa13.37□□□□□ -0.27
PDPN-211ENST00000617617 FOXD4L6Q3SYB3 417 aaPredicted RBP13.37□□□□□ -0.27
PDPN-211ENST00000617617 FOXD4L3Q6VB84 417 aaPredicted RBP13.37□□□□□ -0.27
PDPN-211ENST00000617617 RIOX2Q8IUF8 465 aa13.37□□□□□ -0.27
PDPN-211ENST00000617617 KRI1Q8N9T8 703 aaKnown RBP13.37□□□□□ -0.27
PDPN-211ENST00000617617 CHST13Q8NET6 341 aa13.37□□□□□ -0.27
PDPN-211ENST00000617617 TBCKQ8TEA7 893 aa13.37□□□□□ -0.27
PDPN-211ENST00000617617 AGBL1Q96MI9 1066 aa13.37□□□□□ -0.27
PDPN-211ENST00000617617 ANO3Q9BYT9 981 aa13.37□□□□□ -0.27
PDPN-211ENST00000617617 USH1GQ495M9 461 aa13.37□□□□□ -0.27
PDPN-211ENST00000617617 POTEEQ6S8J3 1075 aa13.37□□□□□ -0.27
PDPN-211ENST00000617617 GADL1Q6ZQY3 521 aa13.37□□□□□ -0.27
PDPN-211ENST00000617617 RASGRP4Q8TDF6 673 aa13.37□□□□□ -0.27
PDPN-211ENST00000617617 ASCC2Q9H1I8 757 aaPredicted RBP13.37□□□□□ -0.27
PDPN-211ENST00000617617 TMEM260Q9NX78 707 aa13.37□□□□□ -0.27
PDPN-211ENST00000617617 INF2Q27J81 1249 aa13.36□□□□□ -0.27
PDPN-211ENST00000617617 Q4G0T1 1027 aa13.36□□□□□ -0.27
PDPN-211ENST00000617617 SAPCD2Q86UD0 394 aa13.36□□□□□ -0.27
PDPN-211ENST00000617617 RASAL3Q86YV0 1011 aa13.36□□□□□ -0.27
PDPN-211ENST00000617617 ELOA2Q8IYF1 753 aaPredicted RBP13.36□□□□□ -0.27
PDPN-211ENST00000617617 WNT7AO00755 349 aa13.36□□□□□ -0.27
PDPN-211ENST00000617617 SLC26A4O43511 780 aa13.36□□□□□ -0.27
PDPN-211ENST00000617617 CNMDO75829 334 aa13.36□□□□□ -0.27
PDPN-211ENST00000617617 UBE2SQ16763 222 aa13.36□□□□□ -0.27
PDPN-211ENST00000617617 JAKMIP3Q5VZ66 844 aa13.36□□□□□ -0.27
PDPN-211ENST00000617617 RESP18Q5W5W9 173 aa13.36□□□□□ -0.27
PDPN-211ENST00000617617 SHCBP1Q8NEM2 672 aa13.36□□□□□ -0.27
PDPN-211ENST00000617617 P2RX7Q99572 595 aaKnown RBP13.36□□□□□ -0.27
PDPN-211ENST00000617617 FBXO40Q9UH90 709 aa13.36□□□□□ -0.27
PDPN-211ENST00000617617 HPSEQ9Y251 543 aa13.36□□□□□ -0.27
PDPN-211ENST00000617617 WDR81Q562E7 1941 aa13.36□□□□□ -0.27
PDPN-211ENST00000617617 MGAMO43451 1857 aa13.36□□□□□ -0.27
PDPN-211ENST00000617617 TBX3O15119 743 aa13.35□□□□□ -0.27
PDPN-211ENST00000617617 TOMM70O94826 608 aa13.35□□□□□ -0.27
PDPN-211ENST00000617617 HERVK_113P62684 666 aa13.35□□□□□ -0.27
PDPN-211ENST00000617617 XRRA1Q6P2D8 792 aa13.35□□□□□ -0.27
PDPN-211ENST00000617617 ENGASEQ8NFI3 743 aa13.35□□□□□ -0.27
PDPN-211ENST00000617617 MTMR9Q96QG7 549 aa13.35□□□□□ -0.27
PDPN-211ENST00000617617 ZNF408Q9H9D4 720 aa13.35□□□□□ -0.27
PDPN-211ENST00000617617 RAVER2Q9HCJ3 691 aaKnown RBP13.35□□□□□ -0.27
PDPN-211ENST00000617617 CTDP1Q9Y5B0 961 aaPredicted RBP13.35□□□□□ -0.27
PDPN-211ENST00000617617 DDX49Q9Y6V7 483 aaKnown RBP13.35□□□□□ -0.27
PDPN-211ENST00000617617 SLC25A27O95847 323 aa13.35□□□□□ -0.27
PDPN-211ENST00000617617 SLC10A3P09131 477 aa13.35□□□□□ -0.27
PDPN-211ENST00000617617 USP17L6PQ6QN14 398 aa13.35□□□□□ -0.27
PDPN-211ENST00000617617 NIPA1Q7RTP0 329 aa13.35□□□□□ -0.27
PDPN-211ENST00000617617 TRERF1Q96PN7 1200 aa13.35□□□□□ -0.27
PDPN-211ENST00000617617 MANSC4A6NHS7 340 aaPredicted RBP13.35□□□□□ -0.27
PDPN-211ENST00000617617 SPDYE3A6NKU9 549 aa13.35□□□□□ -0.27
PDPN-211ENST00000617617 ME1P48163 572 aa13.35□□□□□ -0.27
PDPN-211ENST00000617617 IRX3P78415 501 aaPredicted RBP13.35□□□□□ -0.27
PDPN-211ENST00000617617 PTGDRQ13258 359 aa13.35□□□□□ -0.27
PDPN-211ENST00000617617 ZNF526Q8TF50 670 aaPredicted RBP13.35□□□□□ -0.27
PDPN-211ENST00000617617 LOC102724159A0A0B4J2E5 919 aa13.34□□□□□ -0.27
PDPN-211ENST00000617617 LONP1P36776 959 aaKnown RBP13.34□□□□□ -0.27
PDPN-211ENST00000617617 STAT3P40763 770 aa13.34□□□□□ -0.27
PDPN-211ENST00000617617 INHBEP58166 350 aa13.34□□□□□ -0.27
PDPN-211ENST00000617617 NBR1Q14596 966 aa13.34□□□□□ -0.27
PDPN-211ENST00000617617 PWP2Q15269 919 aaKnown RBP13.34□□□□□ -0.27
PDPN-211ENST00000617617 RGMBQ6NW40 437 aa13.34□□□□□ -0.27
PDPN-211ENST00000617617 BRI3BPQ8WY22 251 aa13.34□□□□□ -0.27
PDPN-211ENST00000617617 MRPS27Q92552 414 aaKnown RBP13.34□□□□□ -0.27
PDPN-211ENST00000617617 SYAP1Q96A49 352 aaPredicted RBP13.34□□□□□ -0.27
PDPN-211ENST00000617617 TIGD1Q96MW7 591 aa13.34□□□□□ -0.27
PDPN-211ENST00000617617 ACAD9Q9H845 621 aa13.34□□□□□ -0.27
PDPN-211ENST00000617617 MORF4L1Q9UBU8 362 aa13.34□□□□□ -0.27
PDPN-211ENST00000617617 PFASO15067 1338 aa13.34□□□□□ -0.27
PDPN-211ENST00000617617 ADGRA2Q96PE1 1338 aa13.34□□□□□ -0.27
PDPN-211ENST00000617617 GCLCP48506 637 aaPredicted RBP13.34□□□□□ -0.27
PDPN-211ENST00000617617 HUNKP57058 714 aa13.34□□□□□ -0.27
PDPN-211ENST00000617617 ARHGAP4P98171 946 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms